|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2172 | HQ1102A | VNG2011 | Hut2686 | NP2280A | rrnAC3177 | Hmu2576 | hla1113 | HVO_1861 | Hbo1736 |
1437 | HQ1102A | 2230 | 1131 | 1268 | 1348 | 1305 | 1298 | 1262 | 1261 | 1319 |
1501 | VNG2011 | 1131 | 2127 | 1425 | 1412 | 1299 | 1321 | 1285 | 1249 | 1282 |
1711 | Hut2686 | 1268 | 1425 | 2516 | 1539 | 1476 | 1502 | 1361 | 1410 | 1445 |
1766 | NP2280A | 1348 | 1412 | 1539 | 2165 | 1578 | 1567 | 1422 | 1436 | 1430 |
1678 | rrnAC3177 | 1305 | 1299 | 1476 | 1578 | 2190 | 1626 | 1375 | 1383 | 1461 |
1690 | Hmu2576 | 1298 | 1321 | 1502 | 1567 | 1626 | 2172 | 1340 | 1380 | 1429 |
1619 | hla1113 | 1262 | 1285 | 1361 | 1422 | 1375 | 1340 | 2260 | 1439 | 1353 |
1703 | HVO_1861 | 1261 | 1249 | 1410 | 1436 | 1383 | 1380 | 1439 | 2204 | 1648 |
1689 | Hbo1736 | 1319 | 1282 | 1445 | 1430 | 1461 | 1429 | 1353 | 1648 | 2198 |
348 symbols consensus -----------------------------------------MDERAALRLLAARLPDAGD #oth 1111111111111111111111111111111111111111111..2..442254136... HQ1102A :::::::::::::::::::::::::::::::::::::::::::::D::GQI:KT::Q::: VNG2011 ::::::::::::::::::::::::::::::::::::::::::::::::E:VGGLVSR::: Hut2686 MSGGDLNPPEPGGGPVQPGTGGDPPIATDRRAYYERDRTPS::::S::G:I:EH:DP::: NP2280A ::::::::::::::::::::::::::::::::::::::::::::::::S:VGD:VAA::: rrnAC3177 ::::::::::::::::::::::::::::::::::::::::::::::::AD::D::::::: Hmu2576 ::::::::::::::::::::::::::::::::::::::::::::::::AMIGT:::G::: hla1113 :::::::::::::::::::::::::::::::::::::::::VN::D:::A:T:D::H::: HVO_1861 :::::::::::::::::::::::::::::::::::::::::::::::::::::D:::::: Hbo1736 :::::::::::::::::::::::::::::::::::::::::::::S:::::::D:::::: consensus DAAVVD----DLVVTTDMLHETTDFPAGTTRYTAGWRAVGASLSDVAAMGAEATAAVAVY #oth .1..1211112212.1....13....3..1.......2.1.....1..1.151.1...1. HQ1102A ::::ISLDSVS::I::::::::::::D::::::::::::::::::I::::GQ:::::::: VNG2011 :::::G:::::TAL:I::::DA::::S::::::::::S::::::::::T::T::::::A: Hut2686 ::::::::::G::::I:::::S::::P:::::::::::::::::::::::G:P::::::: NP2280A :C::::::::::::::::::::::::D::S:::::::S:::::::::::::::::::::: rrnAC3177 :C::::::::GQ:I:::::::R:::::::S:::::::::A::::::::::::::::::A: Hmu2576 :C::::::::GQ:L::::::::::::D::::::::::::::::::::::::D:::::::: hla1113 :::::::::::T:I:::::::R::::P::::::::::V:::::::::::::A:::::::: HVO_1861 :::::::::::::::::::::::::::::::::::::::::::::::::::S::C:::A: Hbo1736 ::::::::::G::::::::::S:::::::::::::::S:A:::::::::::D::::::A: consensus GAPAFDADELAAFVAGARDVCEAVDAEYVGGDLDTHDEFTVATTAIGRTDDP--VLRSGA #oth 112511442143.14.141..4.1213.......313.1.2.1113.522421123.1.. HQ1102A ::::::P::IDS:I:::I:::D:AN:Q::::::::TS:L:I::::L:TVTH:::SY:H:: VNG2011 :::G::D:::::::T::::::T::G:::::::::G:S::::::A:::DA:HR:::T:::: Hut2686 :::T::GE:IT:::D::::::A:::GA:::::::E:::L::::A:V::A::::::::::: NP2280A :::Q:::::I:::IE:CL::::::::::::::::G:E::::::::F:Q::A::::Y:::: rrnAC3177 :::S::::::::::D::Q:::H::G:::::::::S:::::::S::::SAAE::::R:::: Hmu2576 :::T:E::A:T:::E::SE:::::G:::::::::G:::::::::GL::::E::::::::: hla1113 ADA:::EGD:DR:::::I::::::::::::::::::::::T:S::::DVT:AGV:T:::: HVO_1861 A:VEL:ET::GD::R:::::::::::S:::::::::R:::T::::::::::::::R:::: Hbo1736 :::SLEES::RD::R:::E::A::G:::::::::::E::::::::L:E::N:::L::::: consensus RPGDAVCVTGTLGRSAAALRLFEAGDT---ERANDLFRFEPRVAAGRALAPHATAMMDSS #oth 33.1521...41..11.1233.22114111211.1..1.2...32.421344111...1. HQ1102A :I::CI::::N:::T::G:KA::T::I:::AH::E::::T:::NT:A:::K:T::::::: VNG2011 ::::S:V:::S:::::::MA::D::::::::::::::Q:M:::::::V:GA:::::::A: Hut2686 S:::I::::::::::::::GF::::EY:::::::::::::::::::::::AY:S:::::: NP2280A S:::::::::::::::::::R:::::::::::G:E::::::::::::GV::::::::::: rrnAC3177 S::::::::::::::::::K::DR::::::D:::E::Q:::::R::V::R:::::::::: Hmu2576 TV::V::::::::::G:G:::::R::D:::::::E::::::::E::T::SGI:::::::: hla1113 :::::L::::EW::::::::::KR::DEAV:::::::::T::::D:L:::DR:::::::: HVO_1861 ES::LL::::E:::::::V:::::SE::::D::::::::T::::::V::RGS::S::::: Hbo1736 T::NV:::::A:::::::::A:::::C:::D::::::::T::::::V::R:Y:::::::: consensus DGLARSLHQLAEASDCGFALEADALPVHDAVDEVADDPDERRELAAFFGEDFELVCTLPE #oth ......2..1.3.121.12325222.2223153224254214322241.1.....313.4 HQ1102A ::::::V::::S::EV:MS:HW::I:T:PD:K:YV::VST::::TTTV:::::::L:::S VNG2011 :::::::::::A:::::M:VDSGR:::A::LA::TA::V::---:VS::G:::::AAV:P Hut2686 :::::::::::::::V:::V:S-P::IAE:LS:::-:::::Q:::VS::::::::::I:: NP2280A :::::::::::A::G::::I::::I::AP::E::::G:SD:::::VH::::::::A:M:: rrnAC3177 ::::::::::::::G::::I::-P::IDPQ::TF:ETEQ:::D:GV:::::::::::::: Hmu2576 :::::::::::G:::::M:V:T-P::ID:S::D:::GS:::L::G::::::::::::V:: hla1113 ::::::::::::::GV::E:DP:RV:::P:::A:::::A::F::::H::::::::::::D HVO_1861 ::::::A::::::G::::E:DF:::::::::E:::A:A:D::D::::::::::::F:::: Hbo1736 :::::::::I:::::::::F:W:::::::::T:Y:R:T:DE:AM::Y::::::::F:::A consensus DAVDAAREATPVPLTVVGRVTEA----G-VTLDGEPLPDRGYTH---- #oth 34135123252441231.41123331121133111211.3.11.2442 HQ1102A SELAN:::T:S:::H:I:E:::SDN::::III:D:S:::E::::ATK: VNG2011 ER:E:::A:V:GS:S::::::A:AD:::::R:::DA:A:D:W:::::: Hut2686 EKL::::::S:TEISSI::::AE:::::EI::::::::::::::GESA NP2280A T:::::A::S::A::R::T:::S::::::::M:::A:::::::::::: rrnAC3177 SD:LG::::::C::HRI:T:::D:::::::::N::::::Q::S::::: Hmu2576 :E:ER::T:::C:::PI:T::::::::::::::::S::::::S::::: hla1113 :::EPVS:TC:GG::R::::VD:AD::::::A::D:::::::::G::: HVO_1861 S:L::::DVAD:::::::KAV:ESADAA::VA:::AV:::::::GGGE Hbo1736 ::::T::D:LSI:I::::Q::DE::::Q:IVAN:D:V::E::::ADD: