| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1728 | rrnB0029 | VNG2372 | Hbo1494 | rrnAC2661 | Hmu3104 | HVO_0010 | Hut2498 | NP0728A | Hmu0286 | hla2314 |
| 1003 | rrnB0029 | 1674 | 855 | 858 | 820 | 803 | 854 | 844 | 898 | 782 | 756 |
| 1225 | VNG2372 | 855 | 1762 | 1094 | 1079 | 1033 | 1025 | 1029 | 1052 | 847 | 974 |
| 1314 | Hbo1494 | 858 | 1094 | 1707 | 1082 | 1043 | 1155 | 1087 | 1118 | 889 | 930 |
| 1327 | rrnAC2661 | 820 | 1079 | 1082 | 1841 | 1285 | 997 | 1108 | 1103 | 855 | 857 |
| 1277 | Hmu3104 | 803 | 1033 | 1043 | 1285 | 1834 | 1024 | 1140 | 1085 | 864 | 874 |
| 1244 | HVO_0010 | 854 | 1025 | 1155 | 997 | 1024 | 1697 | 1091 | 1123 | 884 | 977 |
| 1273 | Hut2498 | 844 | 1029 | 1087 | 1108 | 1140 | 1091 | 1725 | 1141 | 827 | 868 |
| 1337 | NP0728A | 898 | 1052 | 1118 | 1103 | 1085 | 1123 | 1141 | 1708 | 889 | 898 |
| 1055 | Hmu0286 | 782 | 847 | 889 | 855 | 864 | 884 | 827 | 889 | 1764 | 1023 |
| 1034 | hla2314 | 756 | 974 | 930 | 857 | 874 | 977 | 868 | 898 | 1023 | 1728 |
251 symbols consensus ----MRIGVISDIHANRVALEAVLDDMPPVDGLVCAGDVVGYNPWPAECVDRLRER---- #oth 11111221221.1.2.42..41.131114..522.1..11..1.1123.15532342221 rrnB0029 MTEAT:::LL::::::A:::R::::::E:::A:L::::I:::G:S:KA:LNMV:D::::: VNG2372 :::::::::V::::S:L:::::::A:::A::Q:::::::::::::::A:::T:::::::: Hbo1494 ::::::VA::::V:::::::D:::::::D::SIL::::::::::::::::AE::A::::: rrnAC2661 :::::KL:IL::::G:::::T:::A::::::::::::::::::::H:D:::AM:GHTDA: Hmu3104 :::::KL:IL::V:G:E:::Q:::A:::S::::::::::::::::H:A:::AIAAPESGP HVO_0010 ::::::L:::::V:G:LP::::::ES::S::R::::::::::::::E:::SE:A:::::: Hut2498 :::::::A::A:V:::K::::::AG:::D:::VI::::::::::::EF:::WVQ:H:::: NP0728A :::::LV::V:::::::I:::::::::::::::::::::::::::::D::V::::::::: Hmu0286 ::::::::LL::V:G::P::D:::::L::::E:::V:::::::::::::LE:V::T:::: hla2314 :::::KV:L:::::::LP:::T::::::T::RI::::::I::::::::::E:V::V:::: consensus -----------DVPTVQGNHDRAVATGTGFRFNGMAAAGVEHAREALSDDQREWLADLPR #oth 122211222226321.5.....3.334474441711411322.336.334434.1551.6 rrnB0029 :::::::::::SI:::V:::::N:VR:MTW------ES:D:Y::RV::T:DL:::G:::: VNG2372 :::::::::::G::::M:::::M::::QN:QG::::Q::I:::V:E:H:V::T:IENR:A Hbo1494 ::::::::::::::::M::::::::SD:T::::A::::::K::::K:D::AMT::S:::D rrnAC2661 :LPADASWPTEE::::M::::::::AE:P:A:::::Q::::::T:Q:::E:IK:::A::D Hmu3104 IADSDAALLDGT::::::::::::::DHAP:::H::::A:D:::DQ:T:::LA::DG::T HVO_0010 ::::::::::::::::S:::::::TS:::::::S::::::DY::D:::PASMD::SA::K Hut2498 ::::::::::::::::L:::::::::AEYSG::D::::::::::DH::AAH::::GQ::T NP0728A :::::::::::S::::::::::::V:::::GG::::D:::KY::G::D:SHI:::RG::E Hmu0286 :::::::::::CSVV:::::::T:E:PERYAH:E::R::L:R::R::D:E:::::::R:P hla2314 :::::::::::AAM::R:::::T:E:PEKY:A:R::E::L:::K:S::::::A::DS::: consensus ERRLFDGRVKLVHGHP--DDPDRYTYPDEFSPDL---LGD--------EDVLVLGHTHVQ #oth 4415512.2223.2..2236414.13.53.3141222122111111112.3112....2. rrnB0029 :L::::E:L:I::D:::::EQ::::E:AD:::T:::::E:::::::::::::::::::I: VNG2372 :Q::A::::RVI:D::::EFR:K:::::::E:S::::::RGTDDDTPI::::I::::::: Hbo1494 ::TE:::::R:T:D::::RIQ:K:::::::EA:F::::DG:::::::::::::::::::: rrnAC2661 :::VC:E:::::::::::::::H::::E::G::::::::::::::::::::::M::::H: Hmu3104 :::VL:::::I:::::::::::H::R:G::G:::::::::::::::::::A:IM:::::: HVO_0010 N:T:A::::::A::::::NH::::::::D:::S:::::D:::::::::::L::::::::: Hut2498 ::T:::::::V:::::::::::H::H:S::::G::::::::::::::::::::::::::: NP0728A T::C::::L::::::::::::::::::GL:::E::::::::::::::::::::M:::::: Hmu0286 RTTIDG::YR:A:S::DP:QLGT:VR:RQ:-:E:RPY:D:::::::::H:GI:V:::::: hla2314 AETFTGD:YL:::S::AAERE:A:V::E::-:T:DRHM::::::::::Y:GI:::::::: consensus HHETYDDGIVLNPGSVGQPRDGDPRAAYAVLDLDDLTVEERRVAYDIDAVIDAVEDAGLP #oth 35262231213..........3.13.1.1211234322243..6..231.5521542221 rrnB0029 :A::F:::L:I:::::::::::::D:::G:VG:S::S:DLC::P:::ER:QQRI:GTSIS VNG2372 :::::AA:::M::::::::::E::::::::V:V:::S:T:H::E::::::QA::S::::: Hbo1494 G:RVF:E:::M::::::::::::::::::I::::::::D::::D:::E::V:::TE:::: rrnAC2661 :::V:G::::M::::::::::R:H:::::::::A::::::H:::::TS:::::::::D:: Hmu3104 :::R:::::::::::::::::D::T:::::::VAEG:::::::D::T::::R:::::::: HVO_0010 GYRI::::::::::::::::::::::::::V:::AMEI:AE::N::::R:AER:RK:::: Hut2498 S::K:G::::::::::::::::::G::::LV:::AM:::Q:::R::VG::M:::DE:::: NP0728A AI:Q::E::::::::::::::::::::::LV:::SM:A:R:::E:::E:::E:::E:::: Hmu0286 :EA:V::RLIV:::::::::::::::::::::T::DS::L:::Q::::R::SK::ALDR: hla2314 GKRSVAG:V:V:::::::::::::D:G:::::TQTDE:DLH:::::::R:SE::A::::: consensus RRIGFRLYDGR #oth 32417..6615 rrnB0029 G:N:E::VFD- VNG2372 A:TAD::AS:: Hbo1494 E:::R:::::K rrnAC2661 :Q:::::TQ:: Hmu3104 :Q:::::TQ:: HVO_0010 E:LAS:::E:K Hut2498 ::V:T::SR:Q NP0728A EGT:T::RK:: Hmu0286 ::L:I::L::S hla2314 E:TAA:::K:E