Home |  Text search
[L] (Nfo) COG0648 Endonuclease IV
9 genomes BUD0505 9 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG0183

rrnAC2015

HVO_0573

Hbo0951

Hmu0470

Hut0059

hla0009

NP5118A

HQ1417A

Pairwise sequence scores
Consensus score2108 HQ1417A hla0009 HVO_0573 Hbo0951 VNG0183 NP5118A rrnAC2015 Hut0059 Hmu0470
1688HQ1417A 2131 1435 1488 1496 1529 1541 1563 1530 1556
1710hla0009 1435 2241 1682 1598 1632 1543 1610 1436 1578
1714HVO_0573 1488 1682 2227 1809 1547 1488 1587 1457 1529
1703Hbo0951 1496 1598 1809 2150 1524 1462 1555 1476 1536
1773VNG0183 1529 1632 1547 1524 2122 1612 1589 1535 1597
1777NP5118A 1541 1543 1488 1462 1612 2141 1661 1611 1609
1790rrnAC2015 1563 1610 1587 1555 1589 1661 2132 1620 1709
1739Hut0059 1530 1436 1457 1476 1535 1611 1620 2086 1649
1779Hmu0470 1556 1578 1529 1536 1597 1609 1709 1649 2113

296 symbols
consensus       ---MRVGAHTSIA-------------GGVANAVERQLEYGGNCGQIFTHSPQVWQDPNIG
#oth            12233111121221122121211112.123...4212332.1.....11.....11.2.3
HQ1417A         ::::L::::E:::::::::::::::::::::::D::::N::::::::::::::::::S:D
hla0009         :MSLK::::V::SSSRASNDPETPPY:NI::::F::KQF:::::::::::::::::::::
HVO_0573        ::::Q::::V:MSSSKVSSDDETPPH:N:::::F::VAF:::::::::T:::::R::D:S
Hbo0951         MSSSK:SSDEETP:::::::::::PH:N:::::H::VAF:::::::::T:::::R::D:S
VNG0183         :::::::::V:::::::::::::::::::D:::TNE:DV:::::::::::::::::::::
NP5118A         ::MVQ::::::::::::::::::::::::D::::E::::D:T::::::::::::::::::
rrnAC2015       ::MV:::::::::::::::::::::::::Y::::E:V::S:::::::S:::::::::::D
Hut0059         ::::QI:::::::::::::::::::::::S::::E::::D:::::::S:::::::E:S:E
Hmu0470         ::::::::::::::::::::::::::::AY:::DE:VD:::::::::S:::::::::::E

consensus       DEEAEAFRERSAEHLVGPWVIHSSYLVNLCTPKDDLREKSIDSMQKEVDAAATLGIEYVN
#oth            141.23..25235324......2..........11..2..11.1.4...1.22.311...
HQ1417A         :TD:::::D::QM:DI:::::::::::::::::::::A:::::::Q::::::Q:S:P:::
hla0009         :::::R:::GTERD:E::::::T::::::::::EG:::::L::::::::::D::::P:::
HVO_0573        :::::L:::QT:DK:S::::::::::::::::::G::Q::L::::T:::M:DK:::::::
Hbo0951         :A:::L:::ET:GK:D:::::::::::::::::::::Q::L::::T:::M::K:::::::
VNG0183         AD::A::::GT:AD:D:::::::::::::::::::::A:::::::A:::::H::::P:::
NP5118A         ::::T:::D::::AG:::::::::::::::::::::::::::::::::::::::H:P:::
rrnAC2015       :D:::Q::DLA:D:G:::::::::::::::::::::::::L:::::::::::K:::::::
Hut0059         :S::::::QH:::AD:::::::A::::::::::::::::::A:L:D::::::::D:::::
Hmu0470         :::::Q:::::D::G::::::::::::::::::::::A:::::::::::::D:::V::::

consensus       VHLGAHTGAGVEQGLDNAASALDELDIPDGVTVLIESDAGSGTKLGGDFEHLAYVLERSD
#oth            ..........222..1..2.1111111.12..1.2.....1...1.34121.23122322
HQ1417A         ::::::::::KQ::::::I::::::T:::S::::L:::::::::::NK:D:::::::E:T
hla0009         ::::::::::::G:::::::VI:DI:V:::::I:::::::A::::::E:::::GIID:TE
HVO_0573        ::::::::::EQ::::::V:V::D::::::::::::::::::::M:D:LA::G::::E::
Hbo0951         ::::::::::E:::::::V:V::::::::D::::::::::::::M:DE:::::::::Q:E
VNG0183         :::::::::::DD::::::::::::::::D::::::::::::::::::::::HE::T:::
NP5118A         ::::::::::::::::::::::E:::::::::::::::::::::::ST::E::G::D:C:
rrnAC2015       :::::::::::DG:::::::V::D::::E:::::V::::::::::::Q:::::T:R::T:
Hut0059         :::::::::::::::A::::::::::V:ED::::V::::::::::::::::::T:::A:E
Hmu0470         ::::::::::::G::::::::::::T::::::::V::::::::::::E:::::E::D::E

consensus       QDLDVCLDTAHAFAAGYDLSTPEAVAETIAEFDDVVGLDHLACVHLNDSKHACGTNKDEH
#oth            22122.2....3......1..321.32.3221.33..113.312.......2........
HQ1417A         HE:E:::::::V::::::::::A::NT::K:::TT::V:N::::::::::::::::::::
hla0009         T:I:::V::::::::::::::::::D::::::::::::E::KYI::::::::::::::::
HVO_0573        :::::::::::::::::::::A:G:D::F::L:AE:::E::K:::::::::E::::::::
Hbo0951         ::::I::::::::::::::::SDG:E::V::L::::::E::::::::::::E::::::::
VNG0183         ::::::I::::::::::::::EA::ND:L:A::::::::::QY:::::::::::::::::
NP5118A         :P:::::::::M:::::::::::G::::FEA::ET::::::EYI:::::::D::::::::
rrnAC2015       ::IEF::::::M:::::::::::::D::L::::E:::VED:::::::::::E::::::::
Hut0059         :::G:::::::L::::::::::D:::::V:D::EK::::T:E:L::::::::::::::::
Hmu0470         :::E::V:::::::::::I::ADG:::::::::::::::N:::I:::::::E::::::::

consensus       AHIGEGLIGEAGMRAFINHDAI--ADVPLVLETPTEDGKGFAWNIERVRELREE--
#oth            .11...4...3.121221.31211522.11....2.1.1112..12.122.33521
HQ1417A         ::::::K:::S::E:::::S::::DPI:::::::N:N::::::::D::QN:A:NPA
hla0009         ::::::::::D::ER:L::PDL::I::::A:::::::::S:::::D::::::A:::
HVO_0573        :L::::::::E:::::::::::VDD:::::::::::::::::::::::::::AD::
Hbo0951         ::::::::::E::::::::PDL::L:::::::::::N::::::::::::::::S::
VNG0183         ::::::H:::::::::::::::::::::::::::H:::R::::::D:::D::A-::
NP5118A         ::::::K::::::::::::E:V::::::F:::::::N::SYP:::K:::::Y::A:
rrnAC2015       ::::::H:::D:::::V:::::::R:::::::::::N::S::::::::K:::G:::
Hut0059         ::L:::E:::::IA:VV::::L::REL:F:::::::::R:::::V::A:::::A::
Hmu0470         ::L:::Y:::E::A:LLT:E:L::E:::F:::::::::R::E:::::A:::GNA::