|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2108 | HQ1417A | hla0009 | HVO_0573 | Hbo0951 | VNG0183 | NP5118A | rrnAC2015 | Hut0059 | Hmu0470 |
1688 | HQ1417A | 2131 | 1435 | 1488 | 1496 | 1529 | 1541 | 1563 | 1530 | 1556 |
1710 | hla0009 | 1435 | 2241 | 1682 | 1598 | 1632 | 1543 | 1610 | 1436 | 1578 |
1714 | HVO_0573 | 1488 | 1682 | 2227 | 1809 | 1547 | 1488 | 1587 | 1457 | 1529 |
1703 | Hbo0951 | 1496 | 1598 | 1809 | 2150 | 1524 | 1462 | 1555 | 1476 | 1536 |
1773 | VNG0183 | 1529 | 1632 | 1547 | 1524 | 2122 | 1612 | 1589 | 1535 | 1597 |
1777 | NP5118A | 1541 | 1543 | 1488 | 1462 | 1612 | 2141 | 1661 | 1611 | 1609 |
1790 | rrnAC2015 | 1563 | 1610 | 1587 | 1555 | 1589 | 1661 | 2132 | 1620 | 1709 |
1739 | Hut0059 | 1530 | 1436 | 1457 | 1476 | 1535 | 1611 | 1620 | 2086 | 1649 |
1779 | Hmu0470 | 1556 | 1578 | 1529 | 1536 | 1597 | 1609 | 1709 | 1649 | 2113 |
296 symbols consensus ---MRVGAHTSIA-------------GGVANAVERQLEYGGNCGQIFTHSPQVWQDPNIG #oth 12233111121221122121211112.123...4212332.1.....11.....11.2.3 HQ1417A ::::L::::E:::::::::::::::::::::::D::::N::::::::::::::::::S:D hla0009 :MSLK::::V::SSSRASNDPETPPY:NI::::F::KQF::::::::::::::::::::: HVO_0573 ::::Q::::V:MSSSKVSSDDETPPH:N:::::F::VAF:::::::::T:::::R::D:S Hbo0951 MSSSK:SSDEETP:::::::::::PH:N:::::H::VAF:::::::::T:::::R::D:S VNG0183 :::::::::V:::::::::::::::::::D:::TNE:DV::::::::::::::::::::: NP5118A ::MVQ::::::::::::::::::::::::D::::E::::D:T:::::::::::::::::: rrnAC2015 ::MV:::::::::::::::::::::::::Y::::E:V::S:::::::S:::::::::::D Hut0059 ::::QI:::::::::::::::::::::::S::::E::::D:::::::S:::::::E:S:E Hmu0470 ::::::::::::::::::::::::::::AY:::DE:VD:::::::::S:::::::::::E consensus DEEAEAFRERSAEHLVGPWVIHSSYLVNLCTPKDDLREKSIDSMQKEVDAAATLGIEYVN #oth 141.23..25235324......2..........11..2..11.1.4...1.22.311... HQ1417A :TD:::::D::QM:DI:::::::::::::::::::::A:::::::Q::::::Q:S:P::: hla0009 :::::R:::GTERD:E::::::T::::::::::EG:::::L::::::::::D::::P::: HVO_0573 :::::L:::QT:DK:S::::::::::::::::::G::Q::L::::T:::M:DK::::::: Hbo0951 :A:::L:::ET:GK:D:::::::::::::::::::::Q::L::::T:::M::K::::::: VNG0183 AD::A::::GT:AD:D:::::::::::::::::::::A:::::::A:::::H::::P::: NP5118A ::::T:::D::::AG:::::::::::::::::::::::::::::::::::::::H:P::: rrnAC2015 :D:::Q::DLA:D:G:::::::::::::::::::::::::L:::::::::::K::::::: Hut0059 :S::::::QH:::AD:::::::A::::::::::::::::::A:L:D::::::::D::::: Hmu0470 :::::Q:::::D::G::::::::::::::::::::::A:::::::::::::D:::V:::: consensus VHLGAHTGAGVEQGLDNAASALDELDIPDGVTVLIESDAGSGTKLGGDFEHLAYVLERSD #oth ..........222..1..2.1111111.12..1.2.....1...1.34121.23122322 HQ1417A ::::::::::KQ::::::I::::::T:::S::::L:::::::::::NK:D:::::::E:T hla0009 ::::::::::::G:::::::VI:DI:V:::::I:::::::A::::::E:::::GIID:TE HVO_0573 ::::::::::EQ::::::V:V::D::::::::::::::::::::M:D:LA::G::::E:: Hbo0951 ::::::::::E:::::::V:V::::::::D::::::::::::::M:DE:::::::::Q:E VNG0183 :::::::::::DD::::::::::::::::D::::::::::::::::::::::HE::T::: NP5118A ::::::::::::::::::::::E:::::::::::::::::::::::ST::E::G::D:C: rrnAC2015 :::::::::::DG:::::::V::D::::E:::::V::::::::::::Q:::::T:R::T: Hut0059 :::::::::::::::A::::::::::V:ED::::V::::::::::::::::::T:::A:E Hmu0470 ::::::::::::G::::::::::::T::::::::V::::::::::::E:::::E::D::E consensus QDLDVCLDTAHAFAAGYDLSTPEAVAETIAEFDDVVGLDHLACVHLNDSKHACGTNKDEH #oth 22122.2....3......1..321.32.3221.33..113.312.......2........ HQ1417A HE:E:::::::V::::::::::A::NT::K:::TT::V:N:::::::::::::::::::: hla0009 T:I:::V::::::::::::::::::D::::::::::::E::KYI:::::::::::::::: HVO_0573 :::::::::::::::::::::A:G:D::F::L:AE:::E::K:::::::::E:::::::: Hbo0951 ::::I::::::::::::::::SDG:E::V::L::::::E::::::::::::E:::::::: VNG0183 ::::::I::::::::::::::EA::ND:L:A::::::::::QY::::::::::::::::: NP5118A :P:::::::::M:::::::::::G::::FEA::ET::::::EYI:::::::D:::::::: rrnAC2015 ::IEF::::::M:::::::::::::D::L::::E:::VED:::::::::::E:::::::: Hut0059 :::G:::::::L::::::::::D:::::V:D::EK::::T:E:L:::::::::::::::: Hmu0470 :::E::V:::::::::::I::ADG:::::::::::::::N:::I:::::::E:::::::: consensus AHIGEGLIGEAGMRAFINHDAI--ADVPLVLETPTEDGKGFAWNIERVRELREE-- #oth .11...4...3.121221.31211522.11....2.1.1112..12.122.33521 HQ1417A ::::::K:::S::E:::::S::::DPI:::::::N:N::::::::D::QN:A:NPA hla0009 ::::::::::D::ER:L::PDL::I::::A:::::::::S:::::D::::::A::: HVO_0573 :L::::::::E:::::::::::VDD:::::::::::::::::::::::::::AD:: Hbo0951 ::::::::::E::::::::PDL::L:::::::::::N::::::::::::::::S:: VNG0183 ::::::H:::::::::::::::::::::::::::H:::R::::::D:::D::A-:: NP5118A ::::::K::::::::::::E:V::::::F:::::::N::SYP:::K:::::Y::A: rrnAC2015 ::::::H:::D:::::V:::::::R:::::::::::N::S::::::::K:::G::: Hut0059 ::L:::E:::::IA:VV::::L::REL:F:::::::::R:::::V::A:::::A:: Hmu0470 ::L:::Y:::E::A:LLT:E:L::E:::F:::::::::R::E:::::A:::GNA::