| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1969 | Hut2238 | Hbo1260 | HQ3644A | HVO_0238 | hla0916 | VNG2091 | hla1960 | rrnAC2781 | Hmu3152 | Hmu1755 | NP0190A |
| 757 | Hut2238 | 2100 | 366 | 333 | 338 | 354 | 307 | 366 | 414 | 561 | 244 | 395 |
| 883 | Hbo1260 | 366 | 2215 | 779 | 443 | 533 | 360 | 523 | 475 | 551 | 373 | 513 |
| 796 | HQ3644A | 333 | 779 | 2270 | 509 | 581 | 317 | 431 | 329 | 494 | 331 | 447 |
| 949 | HVO_0238 | 338 | 443 | 509 | 2374 | 671 | 478 | 612 | 451 | 591 | 438 | 566 |
| 956 | hla0916 | 354 | 533 | 581 | 671 | 2467 | 478 | 515 | 383 | 415 | 484 | 510 |
| 759 | VNG2091 | 307 | 360 | 317 | 478 | 478 | 1515 | 405 | 448 | 448 | 433 | 329 |
| 989 | hla1960 | 366 | 523 | 431 | 612 | 515 | 405 | 2285 | 562 | 760 | 346 | 695 |
| 831 | rrnAC2781 | 414 | 475 | 329 | 451 | 383 | 448 | 562 | 1691 | 706 | 314 | 476 |
| 1030 | Hmu3152 | 561 | 551 | 494 | 591 | 415 | 448 | 760 | 706 | 2173 | 432 | 622 |
| 750 | Hmu1755 | 244 | 373 | 331 | 438 | 484 | 433 | 346 | 314 | 432 | 2004 | 594 |
| 963 | NP0190A | 395 | 513 | 447 | 566 | 510 | 329 | 695 | 476 | 622 | 594 | 2176 |
383 symbols consensus --------------------------RGIGEL--V-ASLPDAVVVLFALVTQLGDPWFLF #oth 111111111111112233443344561442345632555357455535421422354454 Hut2238 ::::::::::::::::::::::::::------:::::::DA::WFGVS:::L::::LVIA Hbo1260 MYTHSSAAASASGGALAGAGGLTFAS::V:::AV::E:I::TI:S::SVL:H:::::VCL HQ3644A ::::::::::::::MISPSVLSVLAT::::::RVL:SDI:EI::AV:RIL:H::S:YT:: HVO_0238 ::::::::::::::::MFRSALSLQT::F:::VL-::DA:::L:F::G:::::::Q::F: hla0916 ::::::::::::::::::VTGLVTAE:::::VTL::DA::EL:::A::A::H:A:::::: VNG2091 ::::::::::::::::::::::::::------::-:------------------------ hla1960 :::::::::::::::::::::MFPEG:S::VTEALHG:V::P:L:::::L:::::V:::: rrnAC2781 ::::::::::::::::::::::::::------::-:------------------------ Hmu3152 :::::::::::::::::::::::::V:A::VTEWL:GETLSSAA:P:::::::::L:::T Hmu1755 ::::::::::::::::::::::::VI:LTALSRSIWEAT:GWLIEPA:V::AF:GATA:L NP0190A ::::::::::::::::::::::::MS:A:::TAT:::G::EW::SAAVV::A:::V::V: consensus GLLGLLYWFGR--P--G---DRRRAAFAVALALGALALTVALKGLFALPRPPGA-G-A-- #oth 565573134457636542333255535543555443134451.662333..241126345 Hut2238 ::GFG:::::GWV:VI:DRL:EL:VEL:F:TIA:::::SA:::TG:::E::::::AALPG Hbo1260 FGVSFA:VV:ERI-:::::I::SA:::VLG:G:::VG:::G::E:::::::::::-:-:: HQ3644A AMISI::L:::RGLLV-:::-::::::IL:IEIA:I:I::G::H::::::::VS:-:-:: HVO_0238 VAFTS:::LC:PRITAR:::P::T::SF:G::::S:::VT:::VG:::::::T::AV:AA hla0916 :::AVG:::ASDRLAAS:::P::AG:T:I:AVTC:Y:A:ALG:AW:::::::::I:P:DV VNG2091 -----------::-::-:::----------MVGVG::AI:L:::M::A::::AS:-:-:: hla1960 L:G:M::VA:DEL:RW:::I::::GL:ILG:L:TYV::IGV:::F:LF:::V::::DPPV rrnAC2781 -----------::-::-:::------ML:::LAVGV::V:S:::V:::::::::::T:TH Hmu3152 VVV:::::L::ST:RI:AGV::E:T:TV:::LF:TV::LTT::P::G:A:::D:::V:PQ Hmu1755 FV:S::::LDE::-::-:::-::ST:TV:SY:FV:::VVIL::AAIGVG:::AS:-:-:: NP0190A LF::V:::::SAL:GPV:SLS:PHS:::::::::G::::T:::EWLR::::A:::AEPTA consensus -A--P--L--VYAAIATADGFGFPSGHALGATVVWGGLALALDV-GDRRRR-LAAAAAVV #oth 4433245366545684475141.....142342421141436551475523133322443 Hut2238 T:GM:DIVVPI:TW:VGPG:HA::::::TA:::G:L:::W:YRG:KN:D:A::VL:GGL: Hbo1260 :-::-::-::------AEP:Y::::::T:::::F:::T:::AN:::R::L:::GV:::A: HQ3644A :-::-::-::------YRS:::::::::I:T::F::AA::LTER:WQWW:::V:L:GG:I HVO_0238 P:W::SP:SDLFVSFT:D::::::::::::T:::Y:AAVSL::::W:::::::V:::V:: hla0916 P:WL:SL:SAW:E:QVLS::::::::::T:GAAAYLA:::VY:RAWTGQ::::L::VL:A VNG2091 :-::-::-::--V:HV::H:T:::::::I:SA:LY::::AL:::::G::Q::Y::G::M: hla1960 VRWV:SV:QW:F:D:T::::P::::::TF:S:L::::F::IVGE::K:S:AW::F:G::: rrnAC2781 AELL:AA:RG::ESM::GE:::::::::TLSLL::::I:W::R:::T::Q::T:V::TI: Hmu3152 A:LV:AA:EG:::WL::G::::::::::::T:::F::::W:VRA::PL::::V:L::GL: Hmu1755 :-::-::-:::RSIPLAN:PY:::::::VA:V::Y::::TVR:R:L:DA:V:V::V:LA: NP0190A AGLLTMLPPSAH:QV:A:::::::::::VA:I::Y:::::L---:I:S::G:Y:V:GLLC consensus VLVALSRVVLGVHYLVDVLAGAAL-GLAVLGAVFAVAGRG---------------PGR-- #oth 531321.13111.1331131.4322.4231444655645345321111112233334223 Hut2238 :AI:T::::::::RPHE::::IGV::::Y:FVT:GLL::-::::::::::::::::R::: Hbo1260 :A::A:::II:::::A::I::VTV::V:F:AI:::-::P:LRR:::::::::::::AAPS HQ3644A II::A:::II::::V:::F::I:V::V:L:ALIIMTV:S:LEMG::::::GNMSALV:PT HVO_0238 GI:S::::F:::::G::IVV:VL::::GF:K::SV::AADDPDA::::::TGHLD:A::: hla0916 :A::A::::IE::::::::::L:VG:GV::::LWLAGDPRVRRGGSAESEGGFDSR:ATA VNG2091 :V:SAT:LA:::::::::V:::GV::V::V:G:L::TR:R:::::::::::::::V:Y:: hla1960 GI:S:::L::::::::::VV:VG::::V::::LYV::D::TV:::::::::::::::::: rrnAC2781 A:IG:::L:::::::A:IV::F:IA:T:LVL:LS:LKT--::::::::::::::::E::: Hmu3152 A::S:::LA:::::::::::::G:::::Y:LV:VG:L:T-::::::::::::::::R::: Hmu1755 T::::::::::L:::G:::V::::::AV::::CWRFV::R:::::::::::::::::::: NP0190A L:IP:::::I:::::::I:V:L::::GGY:A::YRLC:::DA:::::::::::::::::: consensus ------AFGLAAVVAVAALAV------TGISIESLLALGGAAGGAVGWRIVGD---AGPE #oth 332223733424523342453221212628593453351542224531775345422777 Hut2238 ::::::T:A::GMIG::GPI:::::::V:LTGD:::VA:V:L:MT:::E----:::FAR: Hbo1260 DRTVIMCYLAGG:ISA::AFT::::::NP:E::V::GV:T:V:::AI:SVL:RA:::LDT HQ3644A HTDVTAM::V::ILTISSIMI::::::APNE:AV::GT:M::T::TI:HKY:RT::F:AI HVO_0238 ::::::L:AI::GLS:L::::VFATGLS:HTENAAA::::SL::LF::TRL--:::::H: hla0916 ALDPTLP:L:::::STG::::TVAGGH::EVV:AGIGIATG::::::::L:DGDEP:V:V VNG2091 ::::::G::::VIL:AG:V::::::::A:PTTDAVA::::::::L::::::A-::::RGA hla1960 ::::::VLLVSVG:G:LG:L-::::::Q:A:F::VA:::S:V:AWLV::G:A:STP:H:S rrnAC2781 ::::::V::F:::I:::G:F:::::::::::RN:AG:::V:VA:::V:ALL:::::SI:: Hmu3152 :::::::::::TA:::VG:PI::::::V:PHP:LVATV:LCV::TAA:LVA::RLL:LSD Hmu1755 ::::::G:LV:G::::G:VL:::::::::G:S::I::F::S::::::S:WIDA::::SGL NP0190A :::::::MMI:LL:::VGA:I::::::-HYGQDTM:::::TL:ARIA:G:::GAV::HE: consensus RRRLGGAIVALGGVAAAGGLAAATF--VEAGAVPVA--------------L-AAGAAAVA #oth 574776676434136733336347713495645634111111111111114344555432 Hut2238 :D:PAVTLPV:AA:I::::V:G::::::RS:TFETG:::::::::::::::ALL:VGSG: Hbo1260 NGD:STRS:VV:A::FPLP:VVMAA:VA:LSMGSL:::::::::::::::FV::::FGGV HQ3644A :VPITLRA:II::ICITI:FT:LITTVIMSTT:Y::QFETMINPISIASYAI:T:SL:AV HVO_0238 SLPTLSPP:::VAFLG::::WVGVD:::ADAS:::T::::::::::::::V:LVT::V:: hla0916 :-------I:VPAL:VT:::WVGAY:::F::S:A:T::::::::::::::::::TT:::V VNG2091 VG:AVRPVAGV:A:V::::V:::SV:G:G:::I::F::::::::::::::-:G:H:::G: hla1960 N::EV::GSVIL:L--:::FF:LLY:::IEPPLL::::::::::::::::F:FGS:I::G rrnAC2781 PT:H:VG:T::L::VSV:T:LGV:::ELDPTPGVIT::::::::::::::::L::-LGTG Hmu3152 T::-S:VLAT:L:L:V::PAL:V:G::LL:SS::L::::::::::::::::::G:LVGGV Hmu1755 :S::D:::L:AV::PY:LV:DR:GE::--:V:P:L:::::::::::::::A:VVY::L:: NP0190A TTL::::VSTAV:L:F:S:F::LY:::::P-:PY:S::::::::::::::F:LGMSVV:: consensus VILALPLAGERLGR--------- #oth 64153144576386653223211 Hut2238 T:V:GQRVIR:VKNE:::::::: Hbo1260 TL:S::V:VSS:FE::::::::: HQ3644A I:::S:SITA:II-::::::::: HVO_0238 F::VA:RIQG:::LGNGATRRAD hla0916 AVV:::ALP::IE:MSGAWN::: VNG2091 :FVG::A:QNFSR-::::::::: hla1960 STV:A:::::K::GEYGA::::: rrnAC2781 :L:T::::::Q:AEKY::::::: Hmu3152 ::V:A::S:HG:TKKSA:::::: Hmu1755 G::L::V:VD::PLSADRTAGA: NP0190A GV:VA::V::AVT:RL:::::::