| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4419 | Hut1591 | VNG0474 | NP1232A | rrnAC0718 | Hmu0775 | hla2400 | HVO_0888 | HQ1536A | Hbo0651 |
| 3698 | Hut1591 | 4402 | 3375 | 3534 | 3521 | 3435 | 3394 | 3492 | 3357 | 3437 |
| 3645 | VNG0474 | 3375 | 4370 | 3584 | 3436 | 3405 | 3340 | 3453 | 3319 | 3431 |
| 3852 | NP1232A | 3534 | 3584 | 4421 | 3615 | 3583 | 3578 | 3644 | 3402 | 3576 |
| 3931 | rrnAC0718 | 3521 | 3436 | 3615 | 4428 | 3880 | 3583 | 3668 | 3579 | 3643 |
| 3926 | Hmu0775 | 3435 | 3405 | 3583 | 3880 | 4438 | 3566 | 3623 | 3556 | 3638 |
| 3928 | hla2400 | 3394 | 3340 | 3578 | 3583 | 3566 | 4418 | 3731 | 3588 | 3789 |
| 3980 | HVO_0888 | 3492 | 3453 | 3644 | 3668 | 3623 | 3731 | 4423 | 3728 | 3906 |
| 3807 | HQ1536A | 3357 | 3319 | 3402 | 3579 | 3556 | 3588 | 3728 | 4492 | 3877 |
| 3959 | Hbo0651 | 3437 | 3431 | 3576 | 3643 | 3638 | 3789 | 3906 | 3877 | 4394 |
600 symbols consensus MPADLNWAIGGEAGDGIDSTGKIFAQALSRAGRHVFTSKDFASRIRGGYTAYKVRTAVDR #oth .33.1...1........1.......1..............................1113 Hut1591 :VN::::::::::::::::::::::R::::::::::::::::::::::::::::::::E: VNG0474 :HD::::::::::::::A::::::::::::::::::::::::::::::::::::::S::Q NP1232A ::E:::::V:::::::::::::::::::::::::::::::::::::::::::::::S::: rrnAC0718 ::E:::::::::::::::::::::::::::::::::::::::::::::::::::::S::: Hmu0775 ::E::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2400 :A::F:::V:::::::::::::::::::::::::::::::::::::::::::::::S::K HVO_0888 ::::F::::::::::::::::::::::::::::::::::::::::::::::::::::I:P HQ1536A ::::F::::::::::::::::::::::::::::::::::::::::::::::::::::::P Hbo0651 ::::F::::::::::::::::::::::::::::::::::::::::::::::::::::::P consensus VQSVVDRLDVLIALTERTIDENLDELHEGSVIIYDGERTTMADVEIPDEMIGLDVPLKRL #oth .1.......1.....2..13..31..121.1.....11121311.3.32221111..13. Hut1591 :E:::::::I::::::::::::::::Q::::::::::Q:::::::V::G::::E:::NS: VNG0474 :::::::::I::::::::V::::::::AD:I:::::D::EF::F:S:A:VT:::I:::D: NP1232A :E:::::::I:::::Q::V:::::::::D:I:::::::SM:S:F:A:G::T:::::::A: rrnAC0718 :E:::::::I:::::::::H::E:::::D:::::::::S::Q:::V:GDATA:E:::::: Hmu0775 :E::::::::::::::::::::MN:::D:::::::::::::QN::::::::::E:::::: hla2400 :::::::::::::::P:::E:::::::::::::::::::::Q::::::::::I::::::: HVO_0888 :::::::::::::::Q::::::::::::::::::::D:S::::::::EG:V:::I:::A: HQ1536A :::::::::::::::P:::K::H::::::::::::::::::EN:::::G:V::::::::: Hbo0651 :::::::::::::::P:::E:::::::::::::::::::::EN::::EG::::::::::: consensus AEEAGGAIMRNVVALGAACEVADFPIENLDEALEKRFGDKGEAIVENNKEAARAGQEYVA #oth ..1......2.1.....111.12.11.1..11.2...23..13112..12...3.331.5 Hut1591 ::::::::::::::::::S::::::V:Y:::::V::::E:::::IA::R::::L:RD::R VNG0474 ::D::::::::I:::::V:A:::::::::::S:::::SG:::Q:I::::Q:::L:A:::: NP1232A ::D::::::::I::::::::::::N::Y:::S::::::G::::::D:::::::L:A:::R rrnAC0718 ::D::::::L:::::::::::TG::::::::S:::::::::::::::::::::K::H::Q Hmu0775 :::::::::A:::::::::::TG::::::::S:::::::::::::::::K:::::::F:Q hla2400 ::::::::::::::::::::::E:::::::S::::::A:::QKL:D::::::::::S::D HVO_0888 :::::::::::::::::::A::::::::::S::Q::::G::::::::::K:::::L:::H HQ1536A :::::::::::::::::::A::::::::::S:::::::S::QSL:::::::::S:RD::G Hbo0651 ::::::::::::::::::::::E:::::::S:::::::S::QQL:D:::::::K::D::: consensus EEY-DHEFDYDLETTDEDYVLLNGDEAIGMGAIAAGCRFYAGYPITPATDVMEYLTGRIE #oth 2.2125333131....2....1...1....1...1..1..1........1..1.11..11 Hut1591 ::T::CSHEFA:::::::::::::::::::A::::::::::::::::::::::::::::: VNG0474 ::FE:VTLP:E::::::::::::::::::::::::::::::::::::::::::::::::: NP1232A :::::LSTP:::::::N:::::::::::::::::G::::::::::::::::::::K::V: rrnAC0718 ::::-G:::::M::::::::::::::::::::::::::::S:::::::::::::M:::VD Hmu0775 ::::::D:G:S:::::N:::::::::::::::::::::::S:::::::::::::M:::VD hla2400 ::::::::::::::::::::::::::::::::::::::::::::::::::::T::::::: HVO_0888 D::::::::::::::::::::I:::Q:::::::::::::::::::::::::::::::::: HQ1536A S:::HN::::S:::::A::::::::::::::::::::K:::::::::::N:::::::::: Hbo0651 D::::::::::::::::::::::::::::::::::::K:::::::::::::::::::::: consensus QFGGHVVQAEDELSAINMALGAARAGARSMTATSGPGIDLMTETFGLVATSETPLVICDV #oth 31..3.1......1...2......1...1............3.....11.1......21. Hut1591 A:::A:::::::::::::::::::::::A::::::::::::N:::::::::::::::AN: VNG0474 :::::::::::::A:::L:::::::::::::::::::::::S:::::::::::::::AN: NP1232A NY::V::::::::::::::::::::::::::::::::::::A::::::::::::::::N: rrnAC0718 ::::K:::::::::::::::::::::::A::::::::::::::::::::::::::::::: Hmu0775 ::::K::::::::A::::::::::::::A:::::::::::::::::::::T::::::::: hla2400 RY::::::::::::::::::::::G::::::::::::::::::::::I::::::::::N: HVO_0888 RY:::::::::::A:::L:::::::::::::::::::::::::::::::::::::::V:: HQ1536A ::::::L::::::::::I::::::::::A::::::::::::::::::IG::::::::A:: Hbo0651 N::::::::::::A:::L:::::::::::::::::::::::::::::::::::::::V:: consensus MRSGPSTGMPTKQEQGDLNMMLYGGHGEIPRFVVAPTTIAECFWKTVEAFNLAEKYQTPV #oth ..................123.2.....1....11..213...21......1.....3.. Hut1591 :::::::::::::::::::A:::::::::::::L:::::G:::DR::::::::::::I:: VNG0474 ::::::::::::::::::::::K::::::::::::::SV::::H:::::::::::::L:: NP1232A ::::::::::::::::::TA::H:::::V::::L:::N:S:::H:::::::::::::L:: rrnAC0718 ::::::::::::::::::::T:::::::::::::::::VS:::::::::::::::::::: Hmu0775 ::::::::::::::::::::A:::::::::::::T::N:S:::::::::::::::::::: hla2400 :::::::::::::::::::G::::::::V::::L:::::::::::::::::::::::L:: HVO_0888 :::::::::::::::::::::::::::::::::::::S:D:::::::::::F:::::V:: HQ1536A ::::::::::::::::::::L::::::::::::::::::::::::::::::::::::::: Hbo0651 ::::::::::::::::::::L::::::::::::L:::::::::::::::::::::::::: consensus YLTADLAMAVTEQTFSPETFDMDEVEIDRGKVVDEDEIDEWQNEKGQFQPHAITDDGISP #oth 1121..11....1.14.13...14...1..11..2341241322332.21.2412..1.. Hut1591 :::::::L::::::Y:::R:::EG::::::::::A::VG::LD:::R:KA::A:E::V:: VNG0474 :V::::S:::::R:YP::E::::A:::E:::L::::::SA:::DTE::R:::D:A::::: NP1232A ::::::SL:::::::E::E::::A::::::::::::N::::T:Q:::::::::::::::: rrnAC0718 F:VS:::::::::::::::::::::::::::::::N:::A:LD:::R::A:FAAA::V:: Hmu0775 F:VS:::L:::::::A:::::::::::E::::::::D::G:::::D:::::FPAA::V:: hla2400 ::::::S::::::::T:D::::::::::::F::::TT::DHMS:S:G::::E:::::::: HVO_0888 :VA:::::::::::::::::::::::::::::::D:S::::LD:E:R:::::L::::V:: HQ1536A ::A:::::::::R::::::::::D:::E:::::::ST::Q:::::S::::::L::::::: Hbo0651 ::::::::::::::::::M::::K::::::::::::T:S:::::::::::::::E::::: consensus RAFPGTEDGAHMSTGLEHDELGRRTEDTDMRVEQVDKRDRKVETAREREDFDYREFGDAD #oth .12...5311..1......11.....1231.22..2..5...1..343.2221.11.23. Hut1591 ::L:::P:A:::T:::::::::::::EE:V:::::Q::Q:::D:::D::A::::::::S: VNG0474 ::V::::G:V:::::::::::::::::::V::D:::::Y:::D::::::Q::::::::S: NP1232A ::::::::::::::::::::::::::::E:::K::::::::::::I:::::::::Y:::: rrnAC0718 ::::::T:::::T::::::::::::::::V:I::::::Q::::::::Q::::::::::S: Hmu0775 :T::::SG::::T::::::A::::::::EV:E:::E::E::::::::Q::W:::::::P: hla2400 ::::::A:::::::::::::Q:::::::G:::::::::N:::D::E::::WSP::::::: HVO_0888 :::::::Q:::::::::::::::::::RS::::::::::::::::KQT:::SP::::::: HQ1536A ::::::TG::::::::::::::::::::::::::::::T:::::::RE::LTP:S::SE: Hbo0651 ::::::DE:::::::::::::::::::::::I::::::T::::::KAE::WSP::::NP: consensus ADTLVISWGSNEGAMREALDLLD-EDGIDVRFLSVPYIFPRPDLTEEIEAAEDVIVVECN #oth 121.12.......123.1344.211214.1112.1..21..11.112211.14111..1. Hut1591 :E:::::::::::::::::GM:::DR::::::::::::Y::::::D:V:::::::::::: VNG0474 ::N::V:::::::TIV:::EY::GD:DP:I:VV:::::Y::::::D:V:::D::V:::A: NP1232A ::::::::::::::::::IGY::::EDL::::I:::::::::::S:::D::D:::::::: rrnAC0718 ::::::::::::::L::G:T::E::::Y::::::::::::::::S::::::::::::::: Hmu0775 :::::V:::::::::::G:EM:A::::L::::V:::::::::::S:::::::QT:::::: hla2400 ::::::::::::::LA::V:::A:DE:V:::V::::::::::::S:DV::::N::::::: HVO_0888 S:::IL::::::::LV::::F:E::::::::::::::M:::::::::::::DE::::::: HQ1536A :PN::::::::::::V::MSI::::R::::H::::::L:::YN:::A:DE::T::A:::: Hbo0651 :::::V:::::::::I::I:F:E:::::::::::I::M:::Y::::AF:E:DE::::::: consensus ATGQFADVIEHDVLERVDRINKYNGVRFKADELADEIKETLAA-------------EVEA #oth 11....121...2.3..5.111.2..1.......42.24223411111111122352343 Hut1591 :::::::L::::T:S::Q:VT::T:::::::::::::EGAI:G::::::::ERAPQ::KR VNG0474 :::::::::::::::::T:::N:T::D:::::::A::T:S::-:::::::::::::---- NP1232A :::::::L::::A:T::E::::::::::::::::ED::AA:GE:::::::::::TA:::: rrnAC0718 :::::::::::::::::Q::::::::::::::::T:::Q::DT:::::::::::PP:ATQ Hmu0775 :::::::::::::::::::V:::D::::::::::E:::DAV:E:::::::::::ET::S: hla2400 ER::::NL::::::A::::::::::::::::::::D::::::::::::::::::::G::: HVO_0888 ::::::N:V:::T:T::K:::::D::::::::::::::A::D:::::::::::::E::S: HQ1536A ::::::N:::::A:S::N:V:::D::::::::::SK:EQ:IDTASSAGTNEETETT:ITQ Hbo0651 :::::::I::::T:T::K:V::::::::::::::AD:::::E::::::::::::::----