| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3870 | HQ2781A | hla1391 | VNG1887 | NP1964A | rrnAC3403 | Hmu2382 | Hut2290 | HVO_2516 | Hbo2166 |
| 2918 | HQ2781A | 3829 | 2490 | 2437 | 2496 | 2468 | 2490 | 2474 | 2667 | 2805 |
| 2953 | hla1391 | 2490 | 3970 | 2570 | 2605 | 2583 | 2629 | 2578 | 2727 | 2684 |
| 3015 | VNG1887 | 2437 | 2570 | 3889 | 2623 | 2526 | 2558 | 2503 | 2708 | 2753 |
| 2980 | NP1964A | 2496 | 2605 | 2623 | 3873 | 2688 | 2763 | 2598 | 2682 | 2655 |
| 3099 | rrnAC3403 | 2468 | 2583 | 2526 | 2688 | 4019 | 3155 | 2762 | 2780 | 2719 |
| 3184 | Hmu2382 | 2490 | 2629 | 2558 | 2763 | 3155 | 4015 | 2770 | 2837 | 2849 |
| 3055 | Hut2290 | 2474 | 2578 | 2503 | 2598 | 2762 | 2770 | 4006 | 2796 | 2907 |
| 3223 | HVO_2516 | 2667 | 2727 | 2708 | 2682 | 2780 | 2837 | 2796 | 4053 | 3003 |
| 3287 | Hbo2166 | 2805 | 2684 | 2753 | 2655 | 2719 | 2849 | 2907 | 3003 | 3852 |
594 symbols consensus MQAALVILDGWGLG----DH-DR-----------RDAVAAADTPNFDRYAEAGANGTLET #oth .221.1.......11111123.51111111111111.131.2..21.33414..622.42 HQ2781A ::T::::::::::::::::::::::::::::::::N::QT:S::T:::LI:K::::::DV hla1391 :ET::I::::::::GGAG:GE:GETVDPSGRPAG::::::::::T::TAT:R::::R:VV VNG1887 ::::::::::::::::::::::::::::::::::::::R:::::T::E:::R::F:::T: NP1964A :E:::::::::::::::::G::E:::::::::::T:::::::::A::AL::R::T:Q::: rrnAC3403 :D:G:I:::::::N::::PDD:V::::::::::::::::::::::::::RD:::AS::T: Hmu2382 :EVG:::::::::N::::PDT:T::::::::::::::::::::::V:::R:I::DS:::: Hut2290 :::G:I:::::::N:::::DE:A:::::::::::::::K::::::::A:WD:::HNR:DA HVO_2516 :D:::I:::::::::::::::::::::::::::::::IK::::::::::RD:::F:::IV Hbo2166 ::T:::::::::::::::::::::::::::::::::::K::E::::::F:DT::Y::::V consensus HGRRVGLPDGQMGNSEVGHLNIGAGRVVKQAYTRIEDAIA-------------DGSFFEN #oth 2..4....2...........1....1..1.121.13.3121111111111111314153. HQ2781A S::Q::::A::::::::::::::::Q::::::::V::::D:::::::::::::N:::QT: hla1391 ::::::::E::::::::::::::::::::::::::S::L::::::::::::::E::LSD: VNG1887 S::D::::::::::::::::T::::::::::::::::::::::::::::::::A:DLCG: NP1964A :::S::::::::::::::::::::::::::DS::VT:D:D:::::::::::::A:V:AD: rrnAC3403 ::::::::E:::::::::::::::::::::DSA:VS:S::RSRGEAPPDDDAQ:PP:::: Hmu2382 ::::::::E:::::::::::::::::::T:DSA:VT:G:::::::::::::::::T:::: Hut2290 S:::::::E:::::::::::::::::::::DT:::T:D:E:::::::::::::::T:::: HVO_2516 D::::::::::::::::::::::::::::::::::G:S:D:::::::::::::::::Y:: Hbo2166 S::N:::::::::::::::::::::::::::::::::::::::::::::::::::::Y:: consensus DAIAAAFDHAEATDGRVHFMGLVSDGGVHSDQQHLHALIELAADRGVEAVTHAFTDGRDT #oth 23153.32114322.31.2...1......1315.11..113.122222.32.1.1..... HQ2781A A::N:::N::V::N::::::::L:::::::E:E:::::::::G::NID:I::V::::::: hla1391 ::::G:L:::AS:G:::::::::::::::::VE::L:::DA:::A::P:TS::::::::: VNG1887 :::SG:L::VAD:G:TL:V::::::::::A::::I:::V:C::G:::::AV::::::::: NP1964A E:L:R:::::DDH:::::::::::::::::Y:S:::::VD:::E:::::::::::::::: rrnAC3403 ET:LS::E::::HG::::::::::::::::Y:D:::::::::GE::TD::S::::::::: Hmu2382 :RLES:::Y:::N::A::::::::::::::Y:K::::::D:::::::::::::::::::: Hut2290 ENLL::M:Y:KDN::Q::::::::::::::R:T:::::::M:::ND::::::::M::::: HVO_2516 :::T::Y:::DEH:::::L::::::::::::::::::::::::::::::::::::::::: Hbo2166 ::LNS::::V:S:G::::::::::::::::E:::::::::M:::::::::::::M::::: consensus SPTGGEDYLADLEAVADEHGTGDVATVSGRYYAMDRDQNWERTKRAYDAIVHREA-EHEA #oth 3.32234114213332324...21.1.3...1.....2..2..121....1412114231 HQ2781A N:HSS:Q::TT::E:IHT:::::I:::::::::::::K::T::RMS:::::N:T::::TT hla1391 A:EIADRF:::VT:K:::R:::H::::T:::H:::::E::::::K::::::E::::L::: VNG1887 :::::::::::::::::::::::::S::::::::::::::A:::::::::TRSDGVA:H: NP1964A A:KS:VGFIE::A:TVE:A::::::::C:::::::::E::::::::::::::::::P::: rrnAC3403 ::::::::::::::HVE:::::H::::C:::::::::::::::R::::::::::G:D:H: Hmu2382 ::::::E:::::A:H:E:R:::H::::A:::::::::::::::R:::::::S::::D:S: Hut2290 :::::A:::RE:QG:I::E::::::::T:::H::::::::::::K::::::::::::F:: HVO_2516 ::::::E::S::::::::Q:::G::::::::::::::::::::::::::::E:::::WT: Hbo2166 D:H::::::TE::S::AAE::::::::::::::::::::::::R:::::::N:::::F:: consensus DTAVDAVTESYDRGDTDEFVEPTLVE----------------GGAALEDGDAVVFFNFRA #oth 44113.233112.12...11...214111111111111111135121311.11211...2 HQ2781A S::LE::S:::::::::::I::::ID::::::::::::::::NTP:V::::::FV::::P hla1391 E:::E:A::AHA::E::::I:::::A:::::::::::::::::AP::A:::::::::::: VNG1887 AA::::::D::E:::::::::::TI::::::::::::::::::::::S:::::::A:::: NP1964A :S::A::AA:::::::::Y::::::SG:::::::::::::::TD:P:SAD:::::::::: rrnAC3403 :E::T:A::::A:DT::::I:::T:G::::::::::::::::DH:G::A::::::::::S Hmu2382 ::::E:::G:::::::::::::::::GDARRAPESERRRGERDRP::D:::::I:::::S Hut2290 PDP:T:TE:::::DT::::I::::I::::::::::::::::::::::::::::I:::::S HVO_2516 E::::::::::::::::::::::V:D::::::::::::::::DAP::::::S:::::::: Hbo2166 A:::::::::::::E:::::::::::::::::::::::::::::::::::::GI:::::P consensus DRARQLTRMLADIRP-DW---GFDTDPPETRLVTMTQYDETFDLPVAFPPNQPADTLGEV #oth ..1...211.4123.23.111531141.44532..11..2..331..1.14314221.11 HQ2781A ::V:::V::::::D::A::::S:E::::T:E:A::A::::::S::::::::EQH:::::: hla1391 ::::::V:::T:T::::::::T::L:Q:GI:MT:::E:::::AF::::::QM::N:I::: VNG1887 ::::::::L::::H:A::DAD:IE:N::AVPV::::E::::::C:::::AAE:T::::A: NP1964A ::::::V::::::D:::::::A:E::::AAA:::::E::::::::::Y::LA:EQP::A: rrnAC3403 ::::::::::G::::E::::::S::E::D::::::::::::::::::::::::::V:::: Hmu2382 ::::::::::G:V::E::::::G::E:::I:::::::::A:::::::Y:::::E:V:::: Hut2290 ::::::::L:NS:D:::::::D:::S::::HY:::::::::::::::Y::::::N::::: HVO_2516 ::::::VG::C::E::V::::E:E:T:::LLMT::::::K:::VS::Y::E::E:::::: Hbo2166 ::::::C:::::VE::E::::A:::S:::L::::::E:::::PF::::::QE:Q:::::T consensus LAEAGHTQLRLAESEKYAHVTYFLNGGREVAFDGERREIVESPDVPTYDQQPEMSAPEVT #oth 213415..1.3..1...1...........12.21.4.4.12....2...21.2..14311 HQ2781A I:T::L::::I::::::::::::::::::I::ED:::::IK::::S::::::S::SN::: hla1391 VS:::L::::I::::::P::::::::::::E:P::::::::::::::::L::::::::L: VNG1887 ::AHD:::::V::::::::::::::::::::::::T:T::D::::::::E::A::::A:: NP1964A :::SDR::::M:::::::::::::::::::::E::::D::D::::::::E::A:::::L: rrnAC3403 :S:::K::I::::T:::P:::::::::::::::::S::::D::::A:::L::::::::LA Hmu2382 :::T:::::::::T::::::::::::::::E::::I:R:::::::::::::::::::::: Hut2290 VSA::G:::::::::::P::::::::::::K::::L:::::::::::::E::::::AG:: HVO_2516 ::G:DM::::M::::::P::::::::::::E::::I:N:::::::::::L::::::V:L: Hbo2166 :SAV:K::::::::::::::::::::::::E::::I:R:I::::::::::K:::::ED:: consensus DTAIDIIES-----------------DDPDVMVLNYANPDMVGHTGDFDAAIAAVEAVDE #oth .212461551111111111111111121.22111.1..1........13.132.1.1..3 HQ2781A ::::EQ:NT:::::::::::::::::T::::LI:::::::::::::::T:::E:I:S::T hla1391 :E:VG::TE:::::::::::::::::E:::L::::::::::::::::::::VE::::::A VNG1887 ::VL:ALAG::::::::::::::::::::::L::::::::::::::::::::E::::::R NP1964A :A:::H:GA::::::::::::::::::A:::L::::::::::::::::E::K::I::::: rrnAC3403 ::::EF::T:::::::::::::::::E::SA::::F:::::::::::::::VT::::::: Hmu2382 ::::AV::D:::::::::::::::::::::A::C::::A:::::::::E::T:::::::: Hut2290 ::::QF:::ESQSDPEQSSGDQPRDS::::LL::::::::::::::::::TV:::::::: HVO_2516 :::::::::::::::::::::::::::::N:::::::::::::::::YG:::E::::::: Hbo2166 ::::EL:D::::::::::::::::::::::A::::::::::::::::::::::::::::: consensus QLGRLVEAIRAAGGHVLITADHGNADDMGTAEDPHTAHTTNPVPFVYLTPDGDD------ #oth 1.2.13322631.112421.......11..423......2.1..2112522233111111 HQ2781A ::D::L:T:Y::::::IV::::::::N::::AN:::::::::::I::TR:::NG:::::: hla1391 ::H::LD:VAD::::AVV::::::::::::L:N::::::F:::::::::::S:::::::: VNG1887 E:::::P:LND::A:AFL:::::::::L::PA:::::::F::::::S:P:ASG::::::: NP1964A :::::ES:::E::::LFV::::::::::::P:A::::::::::::::C::::T::::::: rrnAC3403 :::::::T:G:::::A::C:::::::::::ED:::::::::::::I::S:::TA:::::: Hmu2382 ::::M::::TE::::::VC::::::::::::::::::::L::::::::G:::TA:::::: Hut2290 :::::ID:VQT::AD::::::::::::L::V::::::::L:D::I::::SE::E:::::: HVO_2516 :::::::RV::R::::C:::::::::::::ED:::::::F::::::::AA:R::EAAAEN Hbo2166 ::::::::VQT:::::::::::::::::::::T:::::::::::L:S::::::::::::: consensus ----------------GGRTVRDGGSLCDIAPTLLELLGIDRPAAMTGESLLE- #oth 111111111111111132432.31.2.2.1...313233213.43...31.222 HQ2781A ::::::::::::::::D:D:I::::::::::::V::::SVEQ::::::S::I:: hla1391 ::::::::::::::::::CEI:N:::::::::::VD:I:L:::TE:::::::AE VNG1887 ::::::::::::::::-TAA:::::A:R:::::::DV::::::TV:::A::::: NP1964A ::::::::::::::::::Y::::::T:A:::::::STI:V:I:ET::::::::R rrnAC3403 ::::::::::::::::::::A::::T:A:L:::M:T:M:::::D::::TP:V:: Hmu2382 ::::::::::::::::A::EA::::T:A:L:::M:S:::::::D:::::P:V:: Hut2290 :::::::::::::::::::S::S:::::::::::::::DVEK::E::::::::: HVO_2516 DAEAEQDEVDPDHPLS::::::E::::::::::I:::V:V:Q:S::::::::D: Hbo2166 :::::::::::::::::A::::SF:::::::::M:::ME:EQ:E::::::::::