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Pairwise sequence scores | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1657 | HQ1737A | Hmu2076 | hla0033 | NP6096A | Hut2299 | rrnAC2145 | HVO_2379 | HQ3307A | hla0929 | Hbo2079 | Hut1604 | VNG0451 | NP1986A | Hmu2077 | rrnAC1533 |
891 | HQ1737A | 1700 | 662 | 694 | 765 | 806 | 850 | 770 | 784 | 725 | 762 | 765 | 758 | 800 | 801 | 804 |
923 | Hmu2076 | 662 | 1638 | 811 | 759 | 775 | 811 | 798 | 749 | 801 | 819 | 786 | 773 | 824 | 853 | 849 |
1053 | hla0033 | 694 | 811 | 1721 | 904 | 907 | 891 | 902 | 838 | 902 | 904 | 876 | 866 | 954 | 983 | 912 |
1071 | NP6096A | 765 | 759 | 904 | 1635 | 875 | 940 | 912 | 852 | 895 | 927 | 952 | 919 | 969 | 980 | 953 |
1070 | Hut2299 | 806 | 775 | 907 | 875 | 1643 | 1008 | 903 | 801 | 856 | 953 | 861 | 887 | 882 | 940 | 901 |
1164 | rrnAC2145 | 850 | 811 | 891 | 940 | 1008 | 1642 | 927 | 934 | 925 | 998 | 970 | 912 | 991 | 1059 | 1009 |
1210 | HVO_2379 | 770 | 798 | 902 | 912 | 903 | 927 | 1677 | 998 | 1007 | 1163 | 1040 | 971 | 1039 | 1077 | 1105 |
1212 | HQ3307A | 784 | 749 | 838 | 852 | 801 | 934 | 998 | 1660 | 1089 | 1189 | 1027 | 958 | 1006 | 1124 | 1107 |
1199 | hla0929 | 725 | 801 | 902 | 895 | 856 | 925 | 1007 | 1089 | 1650 | 1209 | 1090 | 1000 | 1096 | 1169 | 1126 |
1320 | Hbo2079 | 762 | 819 | 904 | 927 | 953 | 998 | 1163 | 1189 | 1209 | 1673 | 1081 | 1041 | 1096 | 1167 | 1206 |
1226 | Hut1604 | 765 | 786 | 876 | 952 | 861 | 970 | 1040 | 1027 | 1090 | 1081 | 1681 | 1085 | 1193 | 1217 | 1194 |
1207 | VNG0451 | 758 | 773 | 866 | 919 | 887 | 912 | 971 | 958 | 1000 | 1041 | 1085 | 1529 | 1060 | 1178 | 1131 |
1244 | NP1986A | 800 | 824 | 954 | 969 | 882 | 991 | 1039 | 1006 | 1096 | 1096 | 1193 | 1060 | 1645 | 1245 | 1248 |
1398 | Hmu2077 | 801 | 853 | 983 | 980 | 940 | 1059 | 1077 | 1124 | 1169 | 1167 | 1217 | 1178 | 1245 | 1687 | 1334 |
1321 | rrnAC1533 | 804 | 849 | 912 | 953 | 901 | 1009 | 1105 | 1107 | 1126 | 1206 | 1194 | 1131 | 1248 | 1334 | 1736 |
247 symbols consensus ---------MPRESYQERLEELREDVLYMSELVLERLRMALDALEQKDEELAQEVIEGDD #oth 1111111111414824782571456135122215223492252325313661541153.5 HQ1737A ::::::::::T:K:FN:SI::::NS::D:A:::VTQVNKS:AC::TGN:SS::TI:DT:N Hmu2076 ::::::::::T:DR:ETE::T:K:G:TS:AT::V::::E:AR:Y:DG::DGGR:IA:R:: hla0033 :::::::::::::N:::::N:::T::VA:GD:::D:YET::R:A:TG:DD::D:::G::H NP6096A ::::::::::A:KD::RK:D:::S::VS::D:::D:YNR::TTM:T:::PM::S:::::E Hut2299 ::::::::::A::EFRHA:AD::TA:VE:G:::::::KA:RS::AEG:DDR:EA:::::E rrnAC2145 ::::::::::S:::::QL:D::::H:VE:GD::V:::EA::T::RTV:R:M::S::DS:: HVO_2379 ::::::::::A:NT::S::NQ:E:::::L:::AA::V:Y::::::D:::RK::::::::H HQ3307A :::::::::::::::::SISK::::::::::::S:N::SG::::::::D:::M:::AR:: hla0929 :::::::::::::Q::TK::G::D:::::::::AD::::G:::::RQ:G::GEK::T::A Hbo2079 :::::::::::::Q::DA::S::D:::::::V:A:::::G::::::::DQ::E::::::G Hut1604 ::::::::::::KG:::K:D::Q::::::::I:FD::QTG:::::K::D:::E:::H::: VNG0451 :::::::::-------------------:::V:TD::::::E:MA:::DDA:W:::D::: NP1986A ::::::::::A:KG::QQ:N::::N::::::I::::V:RG:R:::T:::S::R::::::H Hmu2077 :::::::::::::::::::::::::::::::V::::F:VG::::::::::::W::::::: rrnAC1533 MHTTSTFRT:::D::::G:NS::::::::::I::::::LG:::::::::AM::::::::H consensus EINQLYLDLEQDCIDLLALQQPVAGDLRFIAASFKIITDLERIGDLATNLAEYALEADRD #oth 31.531.31.63.22.2..1..1.2...21211...31....11.1.2.116.3653545 HQ1737A K::HRC:EI:::::::F:::::L:::::L:V:::::VN:::::::::V:::::S:A:RQS Hmu2076 :V:E:::E::SE:::::::::::::::::VV:T:::L::::::A:::A:IGR::GTPG:: hla0033 VV:DR::K::EE:TE:::::::::::::LVT:::::::::::VA:::::I:::GG:-:GG NP6096A DV::::::::S:::E:F::::::::::::::ST::::::::::::F:::::G::I::EQN Hut2299 :::RR:::I:A:::::F::E::::::::LV::::::S:::::V::::::::R:::SSRP: rrnAC2145 :::E:::A::A:::::F:::::::T::::V:::::::::::::A:::::::A::QS:::R HVO_2379 :::RI::::::::::::::::::::::::::::::::::::::::::::::Q::ID:EN: HQ3307A D::TM::E:::Q:V::I:::::::S:::T:::::::::::::::::::::::::SA:::: hla0929 :::D:::E::GQ:T::I::::::::::::::::::::::::::A::::::G:::KQ:::E Hbo2079 :::RM:::::::::::I:::::::S::::::::::::::::::::::::::N::T::Q:: Hut1604 ::::::::::RE:VN::::::::::::::::::::::::::::A:::V::G:::ID:EQ: VNG0451 ::::::::::D:::::::::::::::::L::S:::::::::::::::A:::::T:D:::: NP1986A :::E:::E:::S::E:F:::::::S:::::::::::::::::VA::::::GD:T:QSS:: Hmu2077 ::::M::E:::::V::::::::::::::::::::::::::::VA::::::G::T:T:::: rrnAC1533 ::::::::::::::::::::::::S:::::::::::::::::::::::::G::S:::::: consensus VFPEVDIQGIGDAALEMVEDAMAAYADEDPEACRAIAARDDDIDARCEAASETVVRDLIE #oth 763322358214826313461342.55314351341446.152.63.46.2472415.33 HQ1737A FDT:ITAVS::ND:VS:LTESLR::E:YNV:K:Q:VV:E::H::T::LH:::VLT:T::K Hmu2076 RLTV:P:AD:AEM:SSQ:A::I:::VE::::Q::TVV:D:T:L:Q:::::ADDL::Y:AT hla0033 IH:A::FR:L::::G:::A::V:::EAS::D:::E:DT::::L:E::RR:::A:::E:L: NP6096A RYS:I::SY::TE:GA::G::::::::A:ADRA:E::::::R::RL::E:G:A:MQ:::: Hut2299 P:::L::S:::R::AA:L:::L:::ET::AA:::TV:G::::L::M:QR:::R:A:::L: rrnAC2145 LA::::VDT::RE:T::::RSID::RR::V:E::::::D::AL::L:QR:::::A::::: HVO_2379 ::A::::RR::::::D::DQ::D::ES::TDL::SV:E::::L::M:DT::QSI::::MS HQ3307A ::::::::H:::ET:::LTH::QS::::::GR:Q:V:TH::NV:DL:::::S:::QA::K hla0929 :::D::V:R:::DT:A:LD:::::::ES:S:R:F:V:EA:::V::A::::::L::::::: Hbo2079 ::::::::Q:::GT:::LDKS:D:::E:N::L:::V:TQ::::::M::::::M::::::: Hut1604 HG:D::V:A::EIVV::N:Q:::::T:::S:L:Y::GD:::EV::M:QD::D::M:N::: VNG0451 M:::::V:A:::RTI:::T:::::::SA:V:::Y:::E::::::E::RS::Q::I::::: NP1986A LY:D:::::::::VI:::::::E:::E::S:::F::SD:::EV:S:::D::N:::::::: Hmu2077 M:::::::::A:HT:::I:::::G:R:::TD::YQ::E:::E::E:::D:::A::::::: rrnAC1533 :Y::::::DVA:VTI::::N::D::GS::ADQ:YT::DI::EV:E:::::::M::::::: consensus REI-------GDDDWDIEA-------LLDDVSRLLLTVRDLERVGDHAVNIAARTLYMVE #oth 54811111567764835.4111111143723423..21..1..12..1..12..222142 HQ1737A HADGEDYNNTESSA::::Q:::::::A::::T:::::I::I::IA::::::S::::W:IN Hmu2076 YDA:::::::--AGDEH:::::::::::A:TKQF:::::::::::::::::::::F::I: hla0033 ADR:::::ARIEANGAP::DSGHLADA::::::A::AI::::::::::::::::::F:I: NP6096A TQY:::::::---NDN::::::::::VVE:A:::::::::::::S::::::C:::V::A: Hut2299 :DP:::::::EL:A:AL:::::::::V::::ASV:::I::I::::::::::::::::AL: rrnAC2145 ::A::::::D:::G:AV:Q::::::::::::::::::::::::::::::::::::::::: HVO_2379 GDD:::::FE::G:L:P:T:::::::A:V::R:::::::::::I::::::V:::::::ID HQ3307A :N:::::::A::TAF:A:S:::::::YIQ:::::::SI:::::::::G::::::S:::T: hla0929 :NE:::::::LREET:L:G:::::::TMRN:::::::I::::::::::::::::S:::I: Hbo2079 TDP::::::F:EE:R:A:::::::::Y:S:I:::::::::::::::::::::::A::::: Hut1604 ::::::::DEDTT:EE::S::::::::MR::::::::::::::::::::::::::::::D VNG0451 T:::::::DAAT::AE:::::::::::MQ::::::::::::::::::::::S:::V:::D NP1986A T:L:::::DETSSEG:::S:::::::::RE:::::::I:::::I:::::::::::::::: Hmu2077 ::V:::::GD:A:ETE::Q::::::::MN::::::::I:::::::::::::::::::::: rrnAC1533 ::::::::DADSSEAE::Q::::::::MA:::::::::::I::::::::::::::::::: consensus NDDELIY #oth 5123.11 HQ1737A ::SS::: Hmu2076 S:::::: hla0033 S:::::: NP6096A H:::::: Hut2299 G:P:::: rrnAC2145 T:S:::: HVO_2379 :::S:LF HQ3307A :::S:L: hla0929 :::::L: Hbo2079 D::::L: Hut1604 :::A::: VNG0451 ::::::: NP1986A :S::::: Hmu2077 ::::::: rrnAC1533 :::D:::