|
Pairwise sequence scores | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3654 | Hmu3454 | VNG0525 | Hut1069 | NP1502A | NP3016A | rrnAC1829 | Hmu0943 | HQ1707A | hla0350 | HVO_0860 | Hbo0676 |
3033 | Hmu3454 | 4287 | 2927 | 2985 | 2978 | 2994 | 2953 | 2987 | 2922 | 2902 | 2895 | 2911 |
3332 | VNG0525 | 2927 | 3645 | 3208 | 3240 | 3276 | 3194 | 3191 | 3245 | 3274 | 3218 | 3246 |
3324 | Hut1069 | 2985 | 3208 | 3641 | 3343 | 3330 | 3245 | 3244 | 3127 | 3151 | 3197 | 3187 |
3465 | NP1502A | 2978 | 3240 | 3343 | 3646 | 3535 | 3346 | 3312 | 3251 | 3321 | 3299 | 3330 |
3494 | NP3016A | 2994 | 3276 | 3330 | 3535 | 3641 | 3359 | 3320 | 3265 | 3353 | 3309 | 3348 |
3445 | rrnAC1829 | 2953 | 3194 | 3245 | 3346 | 3359 | 3659 | 3536 | 3266 | 3302 | 3297 | 3337 |
3433 | Hmu0943 | 2987 | 3191 | 3244 | 3312 | 3320 | 3536 | 3663 | 3233 | 3314 | 3268 | 3316 |
3351 | HQ1707A | 2922 | 3245 | 3127 | 3251 | 3265 | 3266 | 3233 | 3637 | 3373 | 3315 | 3333 |
3417 | hla0350 | 2902 | 3274 | 3151 | 3321 | 3353 | 3302 | 3314 | 3373 | 3642 | 3387 | 3433 |
3430 | HVO_0860 | 2895 | 3218 | 3197 | 3299 | 3309 | 3297 | 3268 | 3315 | 3387 | 3640 | 3490 |
3478 | Hbo0676 | 2911 | 3246 | 3187 | 3330 | 3348 | 3337 | 3316 | 3333 | 3433 | 3490 | 3658 |
554 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 Hmu3454 LTASLWHPLSATRPETGDSPMPNRFGTGVFPSLRELARDDRSDRPARSAARPIPSTPFEP VNG0525 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1069 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP1502A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP3016A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC1829 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0943 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1707A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0350 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0860 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0676 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------MSSDQDHLKETDTEARFEFKKEEKSAFEAEKGLTEETIRVIS #oth 1111111111111111111112324123.11121.1..112312.3222..1.1.1.2.. Hmu3454 CGTTSDLSNERPLSVALTAMTEH:R:ER:GPGTD:D::NDVLAE:KSQT::::Q:V:L:: VNG0525 :::::::::::::::::::::E--DIQD:::::::::::::N::::S::::::::::::: Hut1069 ::::::::::::::::::::::-NN:ES::::::::::::QS::::::V::N:::V:K:: NP1502A :::::::::::::::::::::EE::I:::::::::::::::S:::KT::::::::::::: NP3016A :::::::::::::::::::::EE::::D:::::::::::::S:::KT::::::::::::: rrnAC1829 ::::::::::::::::::::::::::::::::K::::::::::::::::::::::::::: Hmu0943 ::::::::::::::::::::::::::::::::K::::::::::::::::::::::::::: HQ1707A :::::::::::::::::::::E::::QD:::::::D:::::S:::KT::::::::::L:: hla0350 :::::::::::::::::::::Q::E::::::::::::::::::::QT::::::::V:::: HVO_0860 ::::::::::::::::::::::::::::::::::::::::Q:A::V:::::::::::::: Hbo0676 ::::::::::::::::::::::::::::::::::::::::Q::S:Q:D:::::::::::: consensus EDKDEPEWMLERRLRALEQFQQMPMPTDWPGQPDLSEVDVDEIVPYIRPDIETRGGVDDW #oth 11....1...3...1..122431...32..11..11121112.1..1...213131112. Hmu3454 AE::::::::Q:::D:::RYR:L:::EG:::::::::I:::G::::L:::L::DDS::S: VNG0525 ::::::D:::D::::::::YTK:::::::::::::T:L:IE:::::::::VDK:S:A:E: Hut1069 ::::::::::D:::::::HY::::::S:::::::::::N:ED:I::::::::A:::AEE: NP1502A ::::::::::::::::::::::::::::::::::::D::I::::::::::::A:::AEE: NP3016A :::::::::::::::::::::::::::::::::::::::I::::::::::::A:::AEE: rrnAC1829 ::::::::::::::::::::HE::::DG:::A:::::::::::::::::::::::::::: Hmu0943 :::::::::::::::::::WHEL:::D::::A::I::::::::I:::::::::::::::: HQ1707A ::::::::::Q:::::::::NA:::::S::EA::::::::E:::::::::VDV:A::::: hla0350 :::::::::::::::::::::E:::::::::::::::::I:::I::::::VDV:A::::: HVO_0860 :::::::::::::::::K:Y:K::::::::::::::::N:::::::::::V:V::::::: Hbo0676 ::::::::::K::::::K:::K::::::::::::::::::::::::::::V::::::::: consensus EDLPDEIQDTFDKLGIPEAEKNALSGVGAQYESEVVYQNMQERWEEKGVIFCDMDKAVQE #oth 41..11.21..12.......21....1.......1......121.11..1.11..3..1. Hmu3454 :E:::D:AA:::R::::::::Q::::A::::::::::::::DHL::Q::::::::T:::: VNG0525 :::::::::::EQ:::::::R::::::::::::::::::::::::::::V::N::E:::: Hut1069 D:::::::::::::::::::QQ::::::::::::I:::::::Q::::::V:M:::::::: NP1502A ::::E:::::::::::::::::::::::::::::I:::::::Q::::::::M:::::::: NP3016A ::::E:::::::::::::::::::::::::::::::::::::::::::::::N::::::: rrnAC1829 N:::E:::::::::::::::::::::::::::::I::::::::::D:::::::::::::: Hmu0943 N:::E:::::::::::::::::::::::::::::I:::::::Q::::::V:::::::::: HQ1707A TE:::D:K::::::::::::::::::::::::::::::::::Q::::::::::::E::R: hla0350 TE:::::K::::::::::::::::::::::::::::::::::Q:::::::::N::E::R: HVO_0860 R::::D:K:::::::::::::::::::::::::::::::::::::::::V:MN::Q:::: Hbo0676 T::::D:K::::::::::::::::::::::::::::::::::::::::::::N::::::: consensus HPELVREYFMTKCVPPSDNKFAALHGAIWSGGSFVYVPEDVTVEMPVQAYFRMNSEGMGQ #oth 11121111...22..............1........1..211.3..2.......121... Hmu3454 :::::::H:::T:::::::::::::::V:::::::::::G::::::L:::::::A::::: VNG0525 Y::::K:H:::S:::::::::::::::V:::::::::::::::N:::::::::::::::: Hut1069 ::::::::::::S::::::::::::::V::::::::I::G:::Q::I::::::::::::: NP1502A :::::::::::::::::::::::::::::::::::::::G::::::I:::::::::N::: NP3016A ::::::::::::::::::::::::::::::::::::I::G:::::::::::::::::::: rrnAC1829 :EDILK::::::A:::::::::::::::::::::::::::T::D:::::::::::D:::: Hmu0943 :E:I:::H::::A:::::::::::::::::::::::::::TS:D::I::::::::D:::: HQ1707A :::KLK:H::::A::::::::::::::V:::::::::::::::::::::::::::::::: hla0350 :E:I:::H:::::::::::::::::::::::::::::::NT::D::I::::::::K:::: HVO_0860 :EDI:K:::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0676 :E:::KD:::::::::::::::::::::::::::::::::T::D:::::::::::::::: consensus FEHTLIIAEEGSEVHYIEGCSAPKYSAFNLHSGGVEVFVGEDAHVQYSTVQNWSKNTYNL #oth ...1111..331.1.1.......2.241...1.1.....1.2............1..1.. Hmu3454 :::KIV:::PD::L:L:::::::H:GTH:::::C:::::::G::::::::::::T::::: VNG0525 :::::::::::::::::::::::::GSH:::::::::::::::::::::::::::::F:: Hut1069 ::::::::::N::::::::::::Q:ARH:::::::::::K:G:::::::::::::::::: NP1502A ::::::::::N::::::::::::::::::::::::::::K:G:::::::::::::::::: NP3016A ::::::::::N::::::::::::::::::::::::::::K:G:::::::::::::::::: rrnAC1829 ::::::::::N:::::::::::::::E::::::::::::K:N:::::::::::::::::: Hmu0943 ::::::::::S:::::::::::::::E::::::::::::::N:::::::::::::::::: HQ1707A :::::::::D:A:::::::::::::::::::A:::::::::::::::::::::::::::: hla0350 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0860 ::::::V::K:::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0676 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus NTKRAIVEADGTMEWVSGSMGSKATMLYPSTILKGPGATDNHITIAFAGEGQNIDTGAKV #oth .....12.4311...1.............211...1..1.......1..1..1....... Hmu3454 :::::::::::::::::::::::::::::ASV:::::::::::::::::::::::::::: VNG0525 :::::V::GN:::::::::::::::::::::::::R:::::::::::::D::D::::::: Hut1069 :::::::::::::::I:::::::::::::A:::::::::::::::::::::::::::::: NP1502A ::::::::K::::::::::::::::::::C::::::::::::::::::::::D::::::: NP3016A ::::::A:R:A::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC1829 ::::::C::::::::::::::::::::::::V::::::::::::::::::::D::::::: Hmu0943 ::::::C::::::::::::::::::::::::V::::::::::::::M::::::::::::: HQ1707A ::::::::SE:R:::I::::::::::::::SV:::R::S::::::::::D::D::::::: hla0350 ::::::A:KG:R:::I:::::::::::::::::::R::S:::::::::::::D::::::: HVO_0860 ::::::::KG:R:::I:::::::::::::AS::::R::S::::::::::::::::::::: Hbo0676 ::::::::KN:R:::I:::::::::::::CS::::R::S::::::::::::::::::::: consensus YHNAPNTKSTIESKSISKDGGRTNYRGLVHIADGAENSSTAVECDALMFDNESTSDTMPY #oth .....2.2..1....11..............12..1211.2..........2........ Hmu3454 :::::D:H::V:::::::::::::::::::::::::DA::S::::::::::::::::::: VNG0525 :::::D:S::::::::A:::::::::::::::::::D:K:N::::::::::D:::::::: Hut1069 :::::D:::::::::::::::::::::::::S::::::::N::::::::::D:::::::: NP1502A ::::::::::::::::::::::::::::::::::::G::::::::::::::::::::::: NP3016A ::::::::::V::::VA::::::::::::::::::::::::::::::::::::::::::: rrnAC1829 :::::E::::::::::::::::::::::::::::::D:::S::::::::::::::::::: Hmu0943 :::::D::::::::::::::::::::::::::::::DA::S::::::::::::::::::: HQ1707A :::::E:::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0350 ::::::::::V:::::A::::::::::::::::::::::::::::::::::K:::::::: HVO_0860 :::::E::::::::::::::::::::::::::N::K:::::::::::::::::::::::: Hbo0676 :::::::::::::::::::::::::::::::SE::::::::::::::::::::::::::: consensus MEINESKVDVAHEATVGKIGDEDVFYLQSRGLDDDDAKQMIVSGFIEPITEELPIEYAVE #oth ...2..3................1..................1.....1........... Hmu3454 :::Q::::::::::::::::::::::::::::::::::::::A:::::L::::::::::: VNG0525 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1069 :::Q::Q:::::::::::::::::::::::::::::::::::A::::::::::::::::: NP1502A :::E:::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP3016A :::E:::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC1829 :::Q::::::::::::::::::::::::::::::::::::::A::::::::::::::::: Hmu0943 :::Q::::::::::::::::::::::::::::::::::::::A:::::L::::::::::: HQ1707A ::::::S::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0350 :::::::::::::::::::::::I:::::::::::::::::::::::::::::::::::: HVO_0860 ::::::T::::::::::::::::I:::::::::::::::::::::::::::::::::::: Hbo0676 ::::::T::::::::::::::::I:::::::::::::::::::::::::::::::::::: consensus LNRLIELEMEGSLG #oth 1...1......... Hmu3454 M::::::::::::: VNG0525 :::::::::::::: Hut1069 :::::::::::::: NP1502A :::::::::::::: NP3016A :::::::::::::: rrnAC1829 :::::::::::::: Hmu0943 M::::::::::::: HQ1707A ::::V::::::::: hla0350 ::::V::::::::: HVO_0860 ::::V::::::::: Hbo0676 ::::V:::::::::