| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 3296 | rrnAC0010 | Hmu1292 | VNG1526 | HVO_2469 | Hbo2368 | NP4362A | hla1622 |
| 2544 | rrnAC0010 | 3305 | 2485 | 2055 | 2142 | 2133 | 1661 | 1679 |
| 2499 | Hmu1292 | 2485 | 3297 | 1968 | 2098 | 2111 | 1579 | 1650 |
| 2371 | VNG1526 | 2055 | 1968 | 3311 | 2127 | 2099 | 1593 | 1583 |
| 2636 | HVO_2469 | 2142 | 2098 | 2127 | 3298 | 2611 | 1687 | 1637 |
| 2611 | Hbo2368 | 2133 | 2111 | 2099 | 2611 | 3420 | 1736 | 1559 |
| 1946 | NP4362A | 1661 | 1579 | 1593 | 1687 | 1736 | 3241 | 1786 |
| 1954 | hla1622 | 1679 | 1650 | 1583 | 1637 | 1559 | 1786 | 3316 |
475 symbols consensus ---MAERETWATRAGFILAAVGSAVGLGNIWQFPFKTAQNGGASFLVVYLAAVLLIGLPA #oth 111132.1..11.3..11..1..........1...21133..13.113.1221321.2.. rrnAC0010 ::::SD:::::S:L::L:::I:::::::::::::::::T::::V:::F::V::::::F:: Hmu1292 :::::::A::T::I::LV::I::::::::::::::::GA:::S::::F::I::VA::F:: VNG1526 :::::::::::S:L::::::::::::::::::::::::TE:::A:V::::V:A::L:::: HVO_2469 VID:T::::::::::::V:::::::::::::::::::::F::::::I::IV:A:G::::: Hbo2368 ::::S:::::::::::::::::::::::::::::::::EF:::T:::::::::FG::::: NP4362A :::-M::::::::I:::::::::::::::::R:::QVG::::SA::IM:::C:::::I:: hla1622 :::-MA:::::::T:::::::::::::::::R:::I:G:Y::S:::IT:::F:A:::F:: consensus ILAEFVIGRRTNRNAIDAFEELGHKAWRIVGALGVLTGFWILSYYSVVGGWVLRY-IGGS #oth 2.2..11..1241.213.143.14441242.23213..12.....2..1..12..123.1 rrnAC0010 M::::I:::::::::V:::G:::F:Q::V::G:::F:::::::::N::::::M::::L:: Hmu1292 L:G:::L::::RL::::::G::::RQ:::::::::A:::::::::N::::::M::::V:: VNG1526 ::G:::::::A:L::VE::DR:D:P::T::::M:L:::L:::::::::::::T:::LL:: HVO_2469 :::::::::KA:L:T:S:::K::Y:E::V:::I:LF:::::::::::::::::::::::: Hbo2368 M:::::::::SK::T:S:::R:D::K::F:::I:L:::::::::::::::::::::V::: NP4362A ::V:::::::SQ::P:G::HA::KSRF:AI::VC:V:::V:::::T::A::::::::::: hla1622 ::V::::::::D::PVG:LR:::SG::SYA:W:F:V:::I::::::::A::F:::TLI:I consensus ATGAYFGAPAE---YFGAVSAGPEAVALHAVFMALVVGIVAAGIEDGIEKATKLMVPSIV #oth 31.111343121111.14113.411223113.22322..113.121...111.2...2.2 rrnAC0010 :::::::NS:::::::::IAS:::::VGQ:L:LLIC:::::V:V:::::::::V:::::: Hmu1292 ::::::D::::::::::::::::::I:AQ:L:VLV::::::L:V:::::::::V:::::: VNG1526 ::::::A:::A::::::S::M:W::::F:GA:::ATA::::F:::::::::::::::::L HVO_2469 L:::::A::::::::::Q::::M::L:::::::::::::::::::::::::::::::::: Hbo2368 I::::::GAES:::::::I:::::::::::I::T:::::::F:::::::::::::::::L NP4362A :::::::SEEA:::::LEIAT:YD::V:::::L:VT::::ML::KR:::L:V:A:::A:A hla1622 TE:FTLTD:::ANAL::T::T:LDTLLF:::::L::I::I:::VRR:::LSV:V:::V:: consensus VLLAGLAVWAFTLDGASAGYEYFLSPDFGTL---------------AANAGEIIPFAVGQ #oth 121411.1223..3.2321.411....143111111111111111133242322.2.11. rrnAC0010 L:MI:M:A:VT::E::G:::S:::::::S::::::::::::::::::::::DL::::::: Hmu1292 L:MLAM:::::::E:GA::::::::::LD:::::::::::::::::L::::TA:::::S: VNG1526 :M:V::::Y:S::N:VG:A::FY::::::FI::::::::::::::::D:I:S:V:Y::S: HVO_2469 :I::A:::F::::P::::::A:::::::NA::::::::::::::::SE:FA::V:::::: Hbo2368 :I:GA::::::::P:::E::G::::::LSQ:RLTVESAPSFPWVSFGGPLA:::::::S: NP4362A L:::::::Y:L::::VVD::R:Y:::::A:::::::::::::::::::EWTT:L:A:::: hla1622 :::L:::AYG::::::::A:S:Y:::::::I::::::::::::::::::WT::L:A:A:: consensus AFFTLSLGMGAMITYASYIGDDDSLFVDGGIIVVLNTLVGVLAGLVVFPILFAQ-GIDPG #oth .1.1..1..12.1.11..213.31.32.223.142113113.2.1112.2..331234.3 rrnAC0010 :::::::::A:::::S::::::E::P::::::::T::::::::::::::::::I:NVS:D Hmu1292 :::::::::AI:V:FS::V:N::N:A:::::::GT:::I::::::::::V:::N:::::A VNG1526 :::S::::::::::::::L:::::::A:::L::::::S::L::::::I:L::V:F:TV:D HVO_2469 :::S:::::::::::::::DG:Q:::G::IT::F::SF::I::::::L:L:::::::::N Hbo2368 :::S:::::::::::::::DG:E:::G:SAT:::F:::I:I::::::I:L::::::VE:: NP4362A :L::::::::V:::::::V:E:Q::L::S:S:AL:D:VIAF:S::IL:::::TI:DAT:: hla1622 ::::::V:::V:::::::L:E:RN:AA:A:::AA:D:::A::V:F:::::::SV:::E:: consensus T---GGAGAIFISVAGAFADIP-GGRILGVVFFGVVLIAALSSAISLLEVVVSYAIDNYG #oth 31111.1113.122231.251112.222.11..32121..1.....1..1411142.133 rrnAC0010 ::::S:PS:::VAM:S::PQL:::::L:::::::::::::I:::::::::T:::GV::TS Hmu1292 ::::S:PS::::AM:SG::EL::A::L:::::::::::::::::::::::S::W:T:::D VNG1526 AAAG:::::L:::::Q:::TLGVA::V:::L::::::V:::::::::::::TA:VV:::: HVO_2469 ::::S::::V::::::::G::::::Q:I:F:::A:::::::::::::::::::W:::::D Hbo2368 S::::::::L:::::::::N:::L::VV:F:::L:::V:::::::::::::::::::::A NP4362A D:::::::EF::G:G::::::::L:T:V:::::VTLAV::::::::I:::I:::F::EF: hla1622 ::::::P::::V:LTA:::G::::::::::::::M:G:::::::::I::ML:::L::EL: consensus VSRPQAAAGLGGTLFLLGLPSAWDTAWLGWFDNLAYQLLLPLSVLLILLFVGWVLGDEAV #oth 32.2432332.242.21.4121213221421.4112321.121212332.21..425413 rrnAC0010 Y::VSL::M::VV::V::F:::::L::F::::T:::K:F:::::::::V::::::SSN:: Hmu1292 IG:VPL:::::VG::V::::::::::::T::::::::::::V:::FAM:::::::::::L VNG1526 Y:::AT:FSF::V::A::TL:::N::::D:::S:::GV::::::::GVV:::::Y:PA:: HVO_2469 :::::M:I:::::I::::V:::I:S:::::::T::::::::::::G::V:AA::Y:AP:I Hbo2368 :::::M:V:::::I::::::::::::::T::::::::::::A:::G::T:S:::F:RP:: NP4362A FD:RV:TF:V:VIV:VA:I:A:L:MGTFEVY:QVTGE:::::GMF:LV:::A::VPE:SL hla1622 :::VP:SVA::TAV::::V:VTI:LMF:NLY:L::DGI::V:GS::LA::::::IP:V:R consensus DELRKGSGGGDGFGPAWLWLVRTVVIIAVLLTLVLGL---QTLFAGEFPAIVPPL #oth 3.132.4353553242.1.51.231432.521.2.12111523233352224234 rrnAC0010 A:::Q:T::LRA:::T:::M::::::LG::::::::::::::::LA:D:::I::I Hmu1292 T:I:Q:MS:M:W:::::::T::I::VAG:AV:::::::::R:::V--EG:::::V VNG1526 ::IK::::T:TT:AT::::S:::Y:L:G:FV::Y::V:::TDIY:--A:::-:FV HVO_2469 :::M::::L:E:V:LT::::A::L::V::VA::A::::::::::L::S::::::: Hbo2368 E::LR:TNF::SI:VT::::::S::FL::I::::::::::L:::T:QN::::::: NP4362A :::L::RS-:SNLDVF:::W:::::TV::G:::::SV:::-YG::V::GLLAESA hla1622 ::::::IADIG:LDD::I:A::IPIV:V::VS:Y::IVDYVDFLT:D:ADWLAAR