| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3619 | Hbo4016 | VNG1601 | NP4594A | rrnAC1497 | Hmu1969 | hla1647 | HVO_2401 | Hbo2103 |
| 2807 | Hbo4016 | 3594 | 2655 | 2604 | 2634 | 2689 | 2605 | 2584 | 2645 |
| 3016 | VNG1601 | 2655 | 3652 | 2775 | 2812 | 2802 | 2654 | 2740 | 2829 |
| 3097 | NP4594A | 2604 | 2775 | 3657 | 2832 | 2848 | 2748 | 2869 | 2819 |
| 3125 | rrnAC1497 | 2634 | 2812 | 2832 | 4429 | 3005 | 2791 | 2776 | 2801 |
| 3132 | Hmu1969 | 2689 | 2802 | 2848 | 3005 | 3616 | 2741 | 2815 | 2934 |
| 3047 | hla1647 | 2605 | 2654 | 2748 | 2791 | 2741 | 3659 | 2945 | 2973 |
| 3137 | HVO_2401 | 2584 | 2740 | 2869 | 2776 | 2815 | 2945 | 3605 | 3063 |
| 3152 | Hbo2103 | 2645 | 2829 | 2819 | 2801 | 2934 | 2973 | 3063 | 3623 |
575 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 Hbo4016 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG1601 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP4594A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC1497 MPQTSSWRRSGRWRNDTRLALLGETPWDKPRPTSFTLDTGVSLRLALLGETPWDKPRPTS Hmu1969 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1647 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2401 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2103 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -----------------------------------MNYDQARWARDDED-YEPLLSEKDS #oth 111111111111111111111111111112222234523..2243424442....1.134 Hbo4016 ::::::::::::::::::::::::::::::::::MQQHR::K:NDTES:GH::::::::L VNG1601 ::::::::::::::::::::::::::::::::::MEH:E:::Y:PAEGETN::::::N:Q NP4594A :::::::::::::::::::::::::::::MSDDDPLG::::::MA:E:T::::::A::ST rrnAC1497 FTLDTGVSLRLALLGETPWDKPRPTSFTLDTGVSRVK::::::TD:SD:L::::::::T: Hmu1969 ::::::::::::::::::::::::::::::::::::::S::::TD::DR:::::::::S: hla1647 :::::::::::::::::::::::::::::::::::VIH:::DY::S:::VH::::::::E HVO_2401 :::::::::::::::::::::::::::::::::::::F::::FS::::-::::::::::: Hbo2103 ::::::::::::::::::::::::::::::::::::::::::Y::E:Q-::::::A::N: consensus TTVEVE-DSPLPDDLTRDSLELPALSEPELARHYTRLSQMNYGVDSGPYPLGSCTMKYNP #oth 2213332234...1...1212..222..111...1...12112111..1........... Hbo4016 :RS:L:::TF:::E:::E:V:::SV:::::V::::::::::::I:::::::::::::::: VNG1601 :::S:-::PS::::::::TV:::S:E::::::::V::::Q:::::::::::::::::::: NP4594A ES:T:-:::T:::E::::E:::::::::::::::::::E:::::::::F::::::::::: rrnAC1497 K::DI:::::::::::::::S::DPA::::::::::::::::::E:::F::::::::::: Hmu1969 E::ST:::G:::::::::::T::DV::::::::::::::T::::E:::F::::::::::: hla1647 :::D:RES:::::E:::EE:T:::P::::I::::::::::TWAI:::::::::::::::: HVO_2401 :::::DSEGV::::::::E:T:::::::Q:::::::::::::S:EL:::::::::::::: Hbo2103 :R::ID:::::::::::::V:::D:::::::::::::::::WS:E::::::::::::::: consensus SFTEDVAADPNAAVHPDRSDETAQGTLALLHRLQDYLGRIGGMDAVTLQPPAGAAGEFTG #oth 2....2.1314.11..2115435..2.31413..11.14....1..1..........11. Hbo4016 K::::L::L:S::I::::PS:L:::::QVYYE::E:::K::::S:::::::::::::L:: VNG1601 R::::A::L:A::::::::ETAL:::::VM:D:::::::::::::::::::::::::::: NP4594A K:::::::::K:::::A::EG:V::V:::Q:G::EQ:AT:::::::::::::::::::A: rrnAC1497 ::::::::RAD::I::G:P:S:V::::::C:::::::::::::::::::::::::::::: Hmu1969 :::::L::S:D::::::QPT::T::::E::Y:::::::::::::::S:::::::::::A: hla1647 K::::::V:::::I:::::ARA:::N:E:QY:::E:::E::::::::::::::::::::: HVO_2401 ::::::::::::G:::::::R:I::::G:::G::E::AD::::::::::::::::::::: Hbo2103 :::::::::::::::::::V:SS::::E::YD::::::::::::::::::::::::::A: consensus ILVAKAYHEH-NGD--DRSEVIIPASAHGTNFASAAMAGYDVVELPSGDDGRVDLDALEA #oth .22.1....31413113.3.121.31.......1..11..1112.1221..1..311.2. Hbo4016 :::::::::Y:::EAEQ:D:I:V::::::::::::::::::L::::ADE:::::::V:S: VNG1601 ::I:E::::ATD:G::H:N:::V:DA::::::::::LG::::I::::::::::::::::: NP4594A ::M::::::A::::::::T:::V:D::::::::::::::::::T:::A:::C::::::S: rrnAC1497 :QI:::::::::D:::E::::V::D::::::::T::::::E:::::::::::::IE:::: Hmu1969 :::::::::::::E:::::::L::E::::::::::::::::::S:AGD:::::::::::: hla1647 :A:::::::::H:N:::::::V:::::::::::T::L:::::::::::::::::VE:::: HVO_2401 :::::::::S:R::::::::I:::S::::::::::::::::::::::D::::::ME::D: Hbo2103 :::::::::S:Q:N:::::::V::::::::::::::::::::::::::E:::::M:::D: consensus AVGEDTAALMLTNPNTLGLFERDIEEIAEIVHDAGGLLYYDGANLNALLGRARPGDMGFD #oth .1113...........1.....1.251.12..11.................1........ Hbo4016 ::::S:::::::::::::::::N:::::DM::E::::::::::::::::::::::::::: VNG1601 :L::N::::::::::::::::::::P:::M:::::::::::::::::::::::::::::: NP4594A :LS::::::::::::::::::::::S:::L:::V:::::::::::::::::::::::::: rrnAC1497 :::D:::::::::::::::::::::HV:D::::::::::::::::::::::::::::::: Hmu1969 ::::E::::::::::::::::::::A:::::::::::::::::::::::::::::::::: hla1647 :::D::::::::::::V:::::::A:::D::::::::::::::::::::::G:::::::: HVO_2401 ::S:E:::::::::::::::::::VD:::L:::::::::::::::::::::::::::::: Hbo2103 :LS:::::::::::::V:::::::V::::M:::V:::::::::::::::::G:::::::: consensus IMHYNVHKTFATPHGGGGPGAGPVGVTEELAEFLPSPHVRES--GGGYELYEPDRSIGKV #oth 1..1...................1..211..5...3.2.22412233.1522.3411... Hbo4016 :::::::::::::::::::::::I::R:G::K:::::::GKN:::DQ:T::D:EE::::: VNG1601 :::F:::::::::::::::::::::::D:::G:::D::::Q::A::D::::T:P:::::: NP4594A :::::::::::::::::::::::::::::::D:::A:::::T::DS:::R::::HT:::: rrnAC1497 V:::::::::::::::::::::::::R::::Q:::N:::::R::::N::H:::AN::::: Hmu1969 V::::::::::::::::::::::I:::D:::P:::A:R:A:::::::::YVD::::M::: hla1647 V:::::::::::::::::::::::::VD:::::::::R:::ADE:S:::PF:::NT:::: HVO_2401 ::::::::::::::::::::::::::V::::::::::M:::T::AA:::Q:::ES::::: Hbo2103 ::::::::::::::::::::::::::V::::P:::::R::::::::N:::FD:EET:::: consensus HGFQGNWLVLLKAYAYIARLGDAGLADASAKAVLNANYLAEQIDYEVPFGPFHHEFVASA #oth ..24...1..2.12...2....2..3.11...........3121111.22......1.11 Hbo4016 ::AM::::::::TH:::S:::::::E:T::::::::::::S:::LDI::E:::::::::: VNG1601 :::::::P::V::F:::D::::S:::::::::::::::::D:L:::I:L::::::::::: NP4594A ::Y:::::::::::::::::::E::T::::::::::::::T:V::::::::::::::::: rrnAC1497 :::Y:::P::::TF::::::::E::R:::::::::::::::::E:::::::::::::::: Hmu1969 :::Y:::P::::::::::::::::::::::::::::::::::::::I::::::::::::: hla1647 :::T::::::I:T:::::::::E:::::A::::::::::::R::LD::Y:::::::A:T: HVO_2401 :::A::::::V:::::::::::::::::::::::::::::S:L:LD::Y:::::::A:TS Hbo2103 ::YM::::::V:::::::::::::::::::::::::::::::L:::::YS::::::A:T: consensus GDQDAADVAKRMLDYGVHPPTTKWPEIVDEALMTEPTEIESKRSLDDLAAAFNAAAADSD #oth .13....2..1...1.1........13.31.11.....4.4241..1..3..12142212 Hbo4016 ::N::::F::K:::::M:::::::::::::::::::::A:::TT::Q::D:::SVTEQ:G VNG1601 ::::::::::::::::::::::::::L:A:::::::::T::::T:::::D::::V:G:D: NP4594A :::::::::::::::::::::::::D:::::::::::::::::T::Q::::::::R::DA rrnAC1497 :E:::::A::::::::::::::::::::::::::::::G:T:::::Q:::::::V:G::: Hmu1969 :E::::::::::::::::::::::::::P:::::::::A::R:T::Q:::::D:V:GE:: hla1647 ::R:::::::::::F:::::::::::M:P::ML:::::::GQS::::::E:::L:Y:::: HVO_2401 ::R:::::::::::::::::::::::L:SQ:ML:::::V:D:A::::::H:::::Y:::: Hbo2103 ::K:::::::::::::::::::::::F:P::ML:::::::NRD::::::H:::::M:::: consensus EALAAAPSRTAARRIDQVSAARNPRLSWQAL-DDE #oth 22.35..2312.3....14...2.2...3311133 Hbo4016 D::SE::NA:::K::::TK:::D:V:::---:--- VNG1601 A:::D:::::T::::::TA:::::::::HD:::-- NP4594A DT:::::E::::G::::T::::D:::::::::::A rrnAC1497 AE::D::::P::K:::::T:::::Q:::::::::M Hmu1969 :T::S::ES:::::::::R:::E::::::S:::E- hla1647 :::G:::N::::S:::::::::D::::::::::G: HVO_2401 :::ET:::K:S:::::::::::::::::R::G::: Hbo2103 :E:EN:::::T:::::::::::E:::::H::::E: