|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2178 | HQ3034A | rrnAC3005 | HVO_B0058 | Hbo1623 | NP1116A | VNG1555 | Hmu1995 | hla2068 |
1781 | HQ3034A | 2166 | 1689 | 1594 | 1613 | 1712 | 1602 | 1699 | 1667 |
1889 | rrnAC3005 | 1689 | 2551 | 1703 | 1728 | 1782 | 1705 | 1854 | 1781 |
1805 | HVO_B0058 | 1594 | 1703 | 2275 | 2009 | 1669 | 1594 | 1678 | 1732 |
1853 | Hbo1623 | 1613 | 1728 | 2009 | 2186 | 1709 | 1620 | 1700 | 1749 |
1921 | NP1116A | 1712 | 1782 | 1669 | 1709 | 2163 | 1739 | 1834 | 1832 |
1828 | VNG1555 | 1602 | 1705 | 1594 | 1620 | 1739 | 2105 | 1779 | 1762 |
1977 | Hmu1995 | 1699 | 1854 | 1678 | 1700 | 1834 | 1779 | 2353 | 1887 |
1982 | hla2068 | 1667 | 1781 | 1732 | 1749 | 1832 | 1762 | 1887 | 2182 |
332 symbols consensus -----------------------------------DMPAEDPDDYGTLYVVGIGPGLPHA #oth 111111111111111222122333324344433345552444413...11........33 HQ3034A ::::::::::::::::::::::::::::::::::MSTT::TTS:A:::::::::::::E: rrnAC3005 MRKRRCTHHAPQYRDSTGGPRRPRMSSDGRQSTAAAAE:TR:A::::::::::::::::D HVO_B0058 :::::::::::::::MNDGREPTEPATESATEPAA:DRD:V:::::::::::::::::DH Hbo1623 ::::::::::::::::::::::::::MSEGAETTT:SH::V:::::::::::::::::DH NP1116A :::::::::::::::::::::::::::::::::::-:T:S:GESM::::I:::::::::: VNG1555 :::::::::::::::::::::::::::::::::::MSD:NEAA:::::::::::::::GG Hmu1995 :::::::::::::::::::::MAAESPDDSDASGEKR::SESR:H:::S::::::::::: hla2068 :::::::::::::::::::::::::::::::::::-::EY:::::::::::::::::::: consensus MTQRAKDVIQTADCVIASNLYQEFLRRDGTLPPE-----ADADDG--------V-ERPDG #oth ..12.12114.1..111.........3.....1311223253.2.212212123332221 HQ3034A :::Q::T::E::::::V:::::::::A:::::ET::::T::I:::::::::::KYT:::: rrnAC3005 ::::::::::::::I:::::::::::K::::::QSAELDGET:::EIAGEEGA:L::::: HVO_B0058 ::K:::EL:S:S:::V::::::::::D::::::::::::-GS:::::::::::-:----- Hbo1623 ::::::E::::S:::V::::::::::D::::::::::::-:S:::::::::::-:----- NP1116A :::::R::::::::::::::::::::::::::::::::::ET:G:::::::::TAT::N: VNG1555 ::::::::VR:::::V:::::::::::::::::-:::::--::A:::::::::-:::::- Hmu1995 :::E:::::R::::::::::::::::K:::::::SAAIE:A::G:A:DSESGT:L:::N: hla2068 ::::::E:VA::::::::::::::::::::::::::::D:V::G::::::::::AAKA:: consensus T-QELVRSSMGRQVELAREAFERVRDGEDVAHVSGGDPNVYGKSDLVFTMAEAEDATDVP #oth 231122..1..3.1..12.......3.1111...............111..3313.2.1. HQ3034A :E:::L:::::S:::::I:::::::E:Q:I::::::::::::::::L::::R::E::::: rrnAC3005 SR:T:I:::::K:::::::::::::A:::I::::::::::::::::L::::D:D::D::: HVO_B0058 -:P:V::::::K::::T:::::::::::::V::::::::::::::::::::KGDE::::: Hbo1623 -:P:V::::::Q::::T:::::::::::::::::::::::::::::::::::SD:::::: NP1116A :E::I::::::::::::::::::::N::::::::::::::::::::::L::DE:::D:I: VNG1555 -:::V:::T::::I:::K:::::::::::::::::::::::::::::YL:::E:A:Y::: Hmu1995 :R:::::::::::I:::::::::::A::::::::::::::::::::LY::::::G::::: hla2068 ST::I:::T::Q:::::K:::::::::QT::::::::::::::::::Y::::::::D::: consensus IEIVPGVTAALGGAANLGAPLSNDFCTISLSDKWRGWDEIEEKLRAAAISGFVIVLYNCW #oth ..11.......1...11..........1.........2...........11.11...... HQ3034A ::VI:::::::::::::::::::::::V:::::::::A:::::::::::A::I::::::: rrnAC3005 :::::::::::S:::::::::::::::::::::::::::::::::::::::::V:::::: HVO_B0058 :::::::::::::::MM::::::::::V:::::::::::::::::::::::::::::::: Hbo1623 :::::::::::::::MM:::::::::::::::::::::::::::::::::N::::::::: NP1116A ::V::::::::::::::::::::::::V:::::::::::::::::::::A:::::::::: VNG1555 :::::::::::::::::::::::::::::::::::::E:::::::::::::::V:::::: Hmu1995 ::V::::::::::::::::::::::::::::::::::::::::::::::::::V:::::: hla2068 :::::::::::::::::::::::::::V:::::::::::::::::::::::::::::::: consensus RDYERAIDVIREERADDVPVAIFNDAGRGEAGRNLDDETHTITTLGAATDHDDEVGGMGT #oth .1.1..1212.........11.2..1..13....211..21111.13224.122.....2 HQ3034A :::::::E::::::::::::::::::::ET::::::::::::CQ:DE::T:::K:::::: rrnAC3005 ::::::V::L:::::::::A::V::S:::::::::::::E::::::ELPE:::K:::::S HVO_B0058 :N:::::::V::::::::::G::::::::::::::::::FSV::::D:KA:::D:::::: Hbo1623 :N:T::::IV::::::::::G::::::::::::::::::FS:::::D:KS:::D:::::: NP1116A :::::::E::::::::::::::::::::::::::V:::::::::::::::::EK:::::: VNG1555 :::::::G:L::::::::::::I::::::D::::T:G:::::::::SV:::SG::::::A Hmu1995 :::::::::L::::::::::G::::::::::::::E:::::::::::::::::::::::: hla2068 ::::::::::::::::::::G::::::::A:::::::::::::::::::E:::::::::: consensus SILVGTHETEVWENDYRKHLVTPRGGRDVDDF #oth ..21.11.142.2..2332........1.1.. HQ3034A ::I::N:::T::R::T:AF::::::::::E:: rrnAC3005 ::V:::::::::R:::QEF::::::::::::: HVO_B0058 :::I::::::P:S:::QTY::::::::::::: Hbo1623 :::I::::::P:S:::ETY::::::::::::: NP1116A ::::::::SHE:::::ETY::::::::E:E:: VNG1555 :::I::D::A:::::H:::::::::::::E:: Hmu1995 :::::N::::::::::G::::::::::::::: hla2068 :::::::::N:::::HG:::::::::::::::