|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2314 | HQ1075A | hla1651 | HVO_1830 | Hbo1652 | NP0286A | VNG2553 | Hmu0248 | rrnAC2180 |
1967 | HQ1075A | 2324 | 1793 | 1856 | 1877 | 1787 | 1855 | 1795 | 1829 |
1981 | hla1651 | 1793 | 2323 | 1933 | 1946 | 1884 | 1838 | 1896 | 1827 |
2126 | HVO_1830 | 1856 | 1933 | 2296 | 2014 | 1964 | 1885 | 1852 | 1952 |
2104 | Hbo1652 | 1877 | 1946 | 2014 | 2267 | 2026 | 1865 | 1858 | 1959 |
2047 | NP0286A | 1787 | 1884 | 1964 | 2026 | 2299 | 1857 | 1791 | 1858 |
2015 | VNG2553 | 1855 | 1838 | 1885 | 1865 | 1857 | 2351 | 1876 | 1943 |
1991 | Hmu0248 | 1795 | 1896 | 1852 | 1858 | 1791 | 1876 | 2325 | 1968 |
2087 | rrnAC2180 | 1829 | 1827 | 1952 | 1959 | 1858 | 1943 | 1968 | 2283 |
312 symbols consensus MQLGVIGLGRMGRIVVDRVLDAGHDVVAFDLDAEAVADAADAGATPADSIADLADRLGDE #oth .11..1......1...2.4131..11.1..11321223..11..21.112221444.233 HQ1075A :::::V::::::Q:::::LVT::::I:::::::::::T:::I:::::::LDT:L:T::ET hla1651 :E::::::::::Q:::N:S::::::::::::S:::T:T::E::::A:::V:::C:::D:S HVO_1830 ::::::::::::::::::::::::E::::::S:::::A::::::E::::V:::V:::::D Hbo1652 ::::::::::::Q:::N::::::::::::::SE::::T::::::E::S::E::MN::::: NP0286A ::I:::::::::Q:::E:T::G::::::::::DA::SQ::::::::::::E::VS::P:: VNG2553 :E:::V::::::::::::C:::::::::::I::T:RE:::::::::::TLDA::AE::A: Hmu0248 :E::::::::::::::::T:A:::::::::ISG:::::::E:::::::::::V::Q::A: rrnAC2180 :E::::::::::::::::::E:::E::V::I:E:S:::::::::R::S::::::GK::S: consensus ----KRIWLMVPAGDAVDATLDELDPHLDGDDVVVDGGNSHFEDSVRRAEATDAAYLDCG #oth 1111..1...1...111..1.22.2131132.11......3.23131..143311.1... HQ1075A ::::::L:::I:::E::::::TQ:E:S:TET:II:::::::::A:I::::TS::T::::: hla1651 DEDG::::::::::EP:::::AD:E::::A::::::::::K:QE::::::E::::::::: HVO_1830 ::::::::::::::::::::::D::::::::::::::::::::E:::::::CS::::::: Hbo1652 ::::::::::::::E:::::::::::::::Q:::::::::Y::E::::::::E::::::: NP0286A ::::::::::::::::::::::D::::::::::::::::::::R::E::A::A::::::: VNG2553 :::::::::::::::P:::A::::A::::S:::::::::::::::T::::EH:F:::::: Hmu0248 :::::::::::::::PI::A:::::GLV:A:::I::::::N:H:TL::::R:::::V::: rrnAC2180 :::::::::::::::P:::A::::A:T::S::::::::::Y:::::::::S::::::::: consensus TSGGPAGAELGFSLMVGGPEWAYDELVPVFDAVATGPDGHDRMGPAGSGHYVKMVHNGVE #oth ......1.12.....1..11...1212.1...1....1..11..23.1......1..... HQ1075A :::::::::::::::I::QQ::::::I:::::I::::::::::::V:::::::::::::: hla1651 ::::::S::E:::::I:::::::EA:::I::::::::A::::::ES:::::::::::::: HVO_1830 :::::::::::::::::::Q::::::T:::::::::::::GH::DS:::::::::::::: Hbo1652 :::::::::::::::I:::::::E::T::::::::::::::::::::::::::::::::: NP0286A :::::::::::::::::::::::E:FT::::::::::::::::::S:::::::::::::: VNG2553 ::::::::::::::::::::::::D::::::::::::::::::::::A:::::::::::: Hmu0248 ::::::S::D:::::::::::::EA::::::::::::A:::::::T:::::::::::::: rrnAC2180 ::::::::D:::::::::::::::::::::::::::::::::::::::::::::I::::: consensus YALMQAYGEGFELLANGRYDLDLEAVARTWNNGAVIRSWLLELCEEAFREEGNDLGDVAD #oth .....1........31..1...111.12....................11..3...2.1. HQ1075A :::::T:::::::::::::::::A:::::::::::::::::::::::::A::V:::N::: hla1651 ::::::::::::::TE::::::M:S:::::::::::::::::::::::H:::S::::::: HVO_1830 :::::::::::::::E::::::::S::K::::::::::::::::::::::::S:::::D: Hbo1652 ::::::::::::::::::::::::::S::::::::::::::::::::::::::::::::: NP0286A ::::::::::::::YE::::::M::::::::::::::::::::::::::::::::::::: VNG2553 :::::T::::::::HE::::::::::::::::::::::::::::::::::::S:::T::: Hmu0248 ::::::::::::::::::F:::::S:::::::::::::::::::::::::::T::::::: rrnAC2180 :::::T::::::::::::::::::S::N:::::::::::::::::::::::::::::::: consensus HVAGGSTGTWTVQEALEQEVPVPLIYQALAERFGSRADD-----DGRFSRRLANRLRYGF #oth 211.........2.......11.11111.2...2..32311112411.1..1.1...... HQ1075A YI:::::::::::::::::::::::::::::::::::TGATGDP:::::::V:::::::: hla1651 ::::::::::::R::::::::::I:::::::::D::--N:::::E::::::::::::::: HVO_1830 :::::::::::::::::::::::::::S::::::::::::::::--:::::::::::::: Hbo1652 ::::::::::::::::::::S::::::::::::D::--N:::::E::::::::::::::: NP0286A :I::::::::::E:::::::S:::::E::G:::D::T:E:::::::K::::::::::::: VNG2553 ::::::::::::::::::::::::VS:::S::::::STG::G:DT:::A::::::::::: Hmu0248 R:E::::::::::::::::::T:::::::::::S::ST:::GDDP:::A::::::::::: rrnAC2180 R:E::::::::::::::::::::::::S::::::::::::::::-:::A::::S:::::: consensus GRHEVARRED-- #oth ...1.3.44222 HQ1075A :::D::::DE:: hla1651 ::::::::S:EE HVO_1830 :::::::KD::: Hbo1652 :::::V:E:-:: NP0286A :::::K:Q--:: VNG2553 :::::::TG:DA Hmu0248 :::D:P:::E:: rrnAC2180 :::::P:::-::