| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 5188 | NP2858A | VNG0940 | hla0223 | HVO_1000 | Hbo0443 | Hut2995 | rrnAC0888 | Hmu1573 |
| 3708 | NP2858A | 5105 | 2476 | 3340 | 3178 | 3385 | 3221 | 3225 | 3209 |
| 3191 | VNG0940 | 2476 | 4027 | 2786 | 2901 | 3020 | 2674 | 2771 | 2757 |
| 4220 | hla0223 | 3340 | 2786 | 5254 | 3757 | 3916 | 3501 | 3552 | 3579 |
| 4223 | HVO_1000 | 3178 | 2901 | 3757 | 5197 | 4322 | 3548 | 3557 | 3574 |
| 4419 | Hbo0443 | 3385 | 3020 | 3916 | 4322 | 5172 | 3557 | 3621 | 3589 |
| 3998 | Hut2995 | 3221 | 2674 | 3501 | 3548 | 3557 | 5165 | 3647 | 3648 |
| 4107 | rrnAC0888 | 3225 | 2771 | 3552 | 3557 | 3621 | 3647 | 5153 | 4128 |
| 4101 | Hmu1573 | 3209 | 2757 | 3579 | 3574 | 3589 | 3648 | 4128 | 5160 |
708 symbols consensus MGRLSELFAPDRVAVVGATEREGAVGRAVMENLLDDFDGDVVPVNPNYDEVFGLPCHDDV #oth 115233213151211111132212212122411424241231211144232214534363 NP2858A ::IE:G::D:Q::::::::::D:::::::::::V:::::E:::::::T:S:::RRSR:R: VNG0940 ------------------------------------------------------------ hla0223 ::T:N:M:D::::::::::S:::::::::TS:::::::::T::::::::::L:T::V:E: HVO_1000 ::E:::::::N:I:::::::::::I:::I:D::I:E:::E::::::K:::L:::Q:YG:: Hbo0443 ::E:::::::R:I::::::::::S::::I::::VA:::::::::::K::::::V:AVA:: Hut2995 ::Q:DT::::E:::::::::S::S:::::::::::GYE::::A:::SSET::::D:::SI rrnAC0888 :::::T::::E::::::::DS::S::H::TT::::S:T:E::A::::KET:L::::Y:NL Hmu1573 :::::T::S::::::::::DSD::::::IT:::QAS:A::I:A:::YKES:L::H:::T: consensus AD----ADADLAVIVVPPDIAVDAIEEAGEAGIRNVVVITAGFGETGSEGAARERRLREI #oth 232211433121221112732343444313112421212211121213212311442534 NP2858A GE::::T::::::V:::APE:::VVAA::D:::K:::::S:::S::::::T:::EA:V:A VNG0940 --::::------------------------------------------------------ hla0223 ::::::::::V:::::::S:VL::::AC::::V::::::::::::::ED::::::::A:: HVO_1000 GE::::T:::::::::::KVVLP:MKS::::::Q::::::::::::::::::::QE::D: Hbo0443 GE::::S:::::::::::H:::::VR:S:K::::::::V::::::::::::S::QE:T:V Hut2995 ::V:::GGV:::IV::::Q:VNGVL:::::::V:D:A::::::::A:::::::::DMKA: rrnAC0888 :RLDDPGSV:V::V::::TV::EV::N::::::E::::::::::::::D::E::K::::A Hmu1573 ::VE::::I:V::::::::V:::S:R:::::::E:::::::::::::A::::::KD:::T consensus AEEYDLNLVGPNSLGIMSTPTGLNATFGPENALPGNISFMSQSGAFITAVLDWANDRGIG #oth 143222121111211322134221111224315413311......11...1...21421. NP2858A :DRHGI:V::::C:::L::::::::::S:R::R::::::::::::LV:::::::A::::: VNG0940 ---------------------------------------:::::::::::::::::Q::: hla0223 :D::::::::::::::::::S:M::::::::::::GL:::::::::V:::::::::N::: HVO_1000 :::::::V:::::::::N:DV:M::::::DM::D::M:::::::::::::I:::::ED:: Hbo0443 :::::::::::::::L:::::::::::::D::::::M:::::::::::::::::::Q::: Hut2995 ::DH::::::::C::VL::RRNM::::S:KS:IE::::::::::::::::::::S:HNV: rrnAC0888 :S:::::::::::::V::::V:::::::N:M:SD:D::::::::::::::::::AE:DV: Hmu1573 :A::::::::::::::::::::::::::N:M:TS:G::::::::::V:::::::AE:DV: consensus FKDIVSLGNKAVLDETDFVDAWGDDPDTDVILGYLEDIEDGREFIDTAREVTQDTPIVLV #oth .1.11......1.1.4..234.23.21.2.11....1143.23.123.122.22..2121 NP2858A :N:V::::::::::::::::T::E:D::::V:::::::QN:AS:V:A:ATA:ES::VAVL VNG0940 ::::A::::::::S::::MQ::A:::::N:::::::GVD:::::::D:::::::::A:V: hla0223 :::V::::::::::::::::H::N:EE::::I::::G::::::::EA:::T:::::::A: HVO_1000 :::::::::::::::A::IET:N:::::E::I::::G:SA::::::S::D::K::::::: Hbo0443 :::V:::::::::::A:::::::::E::E::I::::G:SE:::::::::::::::::::: Hut2995 :N:V:::::::::::G::I:Y::E::E::::::::::::N::D:::::::::K:::::A: rrnAC0888 :::::::::::::::S:::AE:::::::::::::::::N::SS:VQ:::::::E:::::: Hmu1573 :::::::::::I:::R::I:E::T:::::::::::::::::AG:VQ:::::::::::::: consensus KSGRTDAGAQAASSHTGAIAGSEAAYEAGLEQAGVIRAESVQELFDYARILADQPLPDTD #oth ...1.2...1..1....131..14....11211.221132121...5143.321.1.232 NP2858A ::::::::::::::::::VT:::V::::AF:K:::LPVA:TE::::VGAM::G::::::: VNG0940 :::::E:::::::::::T:::::::::::FK::::V:::N::::::F::A:DGL:M::SE hla0223 :::::S:::::::::::TL:::DK::::::D::::::::::D::::S:G::GS::::::: HVO_1000 :::K:::::::::::::T::::D:::::::::::::::D:::H:::T::V:G:::::ENK Hbo0443 :::::::::::::::::T::::DQ::::::D:::::::::::::::A::V:ES::::A:: Hut2995 :::::E:::S::A::::::::::R:::::::::::L::T:::::::::T::E:::M:EN: rrnAC0888 :::::::::S::A:::::M::::R::::::DK::TL:V::::::::::Q:::G:::::G: Hmu1573 :::::::::S::A:::::M:::::::::::::S:A::V:T::::::::Q::::::::EGK consensus DVAIVTNAGGPGVMATDAVGDSRLQMASFTDETLDALRESMPDEANIYNPVDIIGDADAE #oth 42.11.........21..1.114.41.31323.52114251.121122....12...242 NP2858A AT:V:::::::::::A::::EAT:AL::LSGT:R:R:::VL::A:SAR::::V::::::: VNG0940 :::VI:::::::::::::::::::S::::E:D:I:::QG:::::::V:::::V::::EID hla0223 S::::::::::::::::::::AD:D:::::KK:S:::::::::::::H::::V:::::V: HVO_1000 :::VI:::::::::T:::I:E:E::::D::::::E:FS::L:A:G::::::::V::::NA Hbo0443 :::VI:::::::::S:::::::::S:::::::::::FS:KL:A:G::::::::V::::N: Hut2995 QI::::::::::::S:::I:::G:E::TL:::::E::EAD:::G::::::::VL:::PS: rrnAC0888 EI::::::::::::T:::::::D::L:Q:G:K:FSR:::E:::::::::::::::::P:: Hmu1573 E:::::::::::::T:::::::G:EL:DL::D:VER:A:T:::::::::::::::::P:A consensus RFRDALDTVLADDNVGMAVVLACPTAVLDFEELAEVIVELQEEYDKPVAACLMGGERVDA #oth .134.113224.22.2311.221...112133.1343334333434.21221.1.42353 NP2858A ::A::::V::E:EG::S:::I:::::::E:::::D:LASVRRRREE:I:V:::A:SES:: VNG0940 :::T:I::::::EH::C:L::SA::::I:YT::SG::TA:::KHN:::VT:::::::TEQ hla0223 :::E::EITVD:::::A:L:::A:::TI::DD::DA:G:VSD:M:A:::::::::D:TRE HVO_1000 ::KE:::VA:::::::::L::T:::::::YNQ::ADT::::::::::I:::F:::::::: Hbo0443 :::::::LA:G:E:::C::::TA::::::Y:Q::ADT:::::K::::::::F::::::KP Hut2995 :YEQ:::V::Q:P:::SV::V:::::::S::K:::TVTDKF:::GV:M::S::::DSAQQ rrnAC0888 ::ET::E::::::::S::::V:::::::S::::S:R:::Q::QFG:::::T::::KS::: Hmu1573 ::EA::E::M:::::A::::V:::::::S:::::::V:DC:Q:::I:::TT::::QS:GP consensus AAEVLGDAGIPNYFDPARAVNGLDALARYREIRAREYAEPTTFDVDRERAREILESVADR #oth 2545152211.3....1.1141.32.4322214321252.34.....21..2..33333. NP2858A :R:H:AA:D::T::::S:::R:::G:::::AV:QHDRG:::D:::::::::N::A::E:: VNG0940 :TD::::::::::::::::IGS:::::VQ::VES:D:QA::A:::::DA::D:::DA::: hla0223 PKQQ:QAK:::C::::::GIES:AT:G:::D:K:::::D:MS:::::K:::::::T:R:: HVO_1000 :SD:MK::::::::::S:::D::E::SK:AD::Q:::DA::E:::::::::::::T:K:: Hbo0443 :::A:S::::::::::::::::::::S:F:::SE::FD::::::::::::::::S::EG: Hut2995 :N:I::E::::S::::::G:::::::RE:A:::EH:::::RD:::::::::::::RTKE: rrnAC0888 G:N::SE::V::::::::::GS:G::K:::::K:T::E::::::::::::::::::G:R: Hmu1573 ::ST:TES::::::::::::DS:::::::DD:QS:::TD:E::::::::::D::Q:A::: consensus DDNRLGVEAMELLDAYGIPTPAGDIVDSPAAALEVAEDIGGDVVMKIVSPDILHKSDIGG #oth 3511..1...2..1....2.14121.22153.641.33.312.............1.... NP2858A P:::::I:::G:::::::::LDSE::E:::::SDA:AA:D:::::::::::::::T:::: VNG0940 GAT:::::::D::::::::::T::V::::D::RR::R::E:::::::::::::::::::: hla0223 :::::::::::::::::::::::E:::::ER:A:::A::::::::::::::::::::::: HVO_1000 :ET:::::::::::::::E::::::::D::D::::::::D:N:::::::::::::::::: Hbo0443 ::T:::::::D:::::::Q::D:::::A::E::::::::E:::::::::::::::::::: Hut2995 :T:K:::::::::E:::::::Q:A::SDKN::V:A:K::P:N:::::::::::::::::: rrnAC0888 GS:::::::::::::::::::Q::V:S::VE:EA:::E::D::::::::::::::::::: Hmu1573 NQ::::::::D::::::::::E:EV::::SE:QS:::S::DE:::::::::::::::::: consensus VEVGVPNEEVADTYEDLITRARNYQPDATILGVQVQEMVDLDAGVETIVGMNRDPQFGPL #oth .2.2.35221412.11.12..211.2..211.1...1.212.3.1...1.31........ NP2858A :::::AAA:A::I::T:VA:::TR::::R:::::::A:A:T:::::::::AT:::::::: VNG0940 :K:::ETDA:::A::::::::T::::::::::I:::::::V:::T:::L::::::::::: hla0223 :A:::SDAD:T::::::::::::::::::V::::::::::::D::::::::::::::::: HVO_1000 :K:::E::D:Y:A::::::::K::::::N::::::::::N::D::::::::::::::::: Hbo0443 :K::::::::Y:A::::V::::::::::N:I:::::::::::S::::::::::::::::: Hut2995 :::S::DD:::S::D:::A:::::::::::::::::::A:::::T:::::I::::::::: rrnAC0888 :::A::V:::R::::::VV::::::E::::::::::::::::N:::::L::::::::::: Hmu1573 :::::SP:D:W::::::VV::::::Q::::::::::::L:V:::T:::L:V::::::::: consensus LMFGLGGIFVEVLEDTTFRVAPVSEPEAEEMLDDIDSAPLLRGARGRDPVDEAAVVETIQ #oth 22.........11..21321..1..41.44.221121..1......11.1.22222.1.1 NP2858A VV:::::::::::::::ATL::L::Q:::A::::::A::::::::::::::::::::::: VNG0940 :L:::::::::I::::SV:::::::R::GD:I::L::::::::::::::A::::IT:A:: hla0223 ::::::::::::M:::::::::::::::R::TEE:Q:::::::::::::::VD::I:::G HVO_1000 M::::::::::I:::::::::::::T:::D:TKE::A::M::::::N::::IGGIT:::: Hbo0443 :::::::::::::::::::::::::S::H::TEE:::::::::::::::::V:G:T:::: Hut2995 V::::::::::::::A:::::::::::::::I:E:::::::::::::E:::::G:::::: rrnAC0888 :L:::::::::::::N:VS::::::T::KG:::::::::::::::::::::::TL::::: Hmu1573 VL:::::::::::::::L::::::::D:RS:::::E::::::::::::::::D:L::::: consensus RLSQLVTDFPAILELDINPLVATPDG-----VAAVDVRLTVDPEEL-- #oth .1.1..11....1...1...1.12.21111114.2.211.2.123.11 NP2858A ::::::S:::::::::::::::::::::::::::::IQ:::::AT::: VNG0940 ::::::::::::::::V:::L::G:S:::::AT:L::Q::I::D:::: hla0223 ::::::::::::::::::::::L::ADGGTNA::::::::::::K:EP HVO_1000 ::::::::::::::::::::::L:::::::::K::::::::::D:::: Hbo0443 ::::::::::::::::::::::::::::::::Q::::::::::DQ::: Hut2995 :I:K::::::::::::::::::::::::::::V:::I:A:::Q::::: rrnAC0888 ::::::::::::V:::::::::::::::::::Q:::L:::L:Q:K::: Hmu1573 :::::::E::::V::::::::::N::::::::::I:L:::L:Q:::::