|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 4681 | VNG1306 | hla1262 | Hut0488 | HQ2994A | HVO_2808 | Hbo2546 | NP4264A | rrnAC1097 | Hmu1786 |
3928 | VNG1306 | 4740 | 3599 | 3541 | 3556 | 3532 | 3656 | 3664 | 3666 | 3607 |
4000 | hla1262 | 3599 | 4667 | 3572 | 3752 | 3712 | 3779 | 3627 | 3634 | 3604 |
3953 | Hut0488 | 3541 | 3572 | 4661 | 3601 | 3508 | 3680 | 3703 | 3816 | 3696 |
4059 | HQ2994A | 3556 | 3752 | 3601 | 4720 | 3913 | 3988 | 3764 | 3689 | 3708 |
3962 | HVO_2808 | 3532 | 3712 | 3508 | 3913 | 4689 | 4045 | 3660 | 3635 | 3640 |
4188 | Hbo2546 | 3656 | 3779 | 3680 | 3988 | 4045 | 4698 | 3835 | 3769 | 3773 |
4066 | NP4264A | 3664 | 3627 | 3703 | 3764 | 3660 | 3835 | 4701 | 3872 | 3825 |
4137 | rrnAC1097 | 3666 | 3634 | 3816 | 3689 | 3635 | 3769 | 3872 | 4663 | 4168 |
4105 | Hmu1786 | 3607 | 3604 | 3696 | 3708 | 3640 | 3773 | 3825 | 4168 | 4770 |
625 symbols consensus --MHEHDVIVVGAGGAGLRAAIAAQEEGADVAIVTKLHPVRSHTGAAEGGINAALREGDS #oth 1111........1...........4.1.....2.1...................1112.1 VNG1306 :::Y::::::::G:::::::::::::::::::::::::::::::::::::::::::D::: hla1262 ::::::::::::::::::::::::::A:::::::S:::::::::::::::::::::DA:: Hut0488 :::Y::::::::::::::::::::K:::::::L::::::::::::::::::::::QDE:: HQ2994A ::::::::::::::::::::::::::::::::::S::::::::::::::::::::::::: HVO_2808 :::Y::::::::::::::::::::H:::::::::S::::::::::::::::::::::::: Hbo2546 ::::::::::::::::::::::::::::::::::S::::::::::::::::::::::::: NP4264A MTI:::::::::::::::::::::H:::::::M:::::::::::::::::::::I:D::D rrnAC1097 :::Y::::::::::::::::::::N:::::::L::::::::::::::::::::::Q:::: Hmu1786 ::::::::::::::::::::::::D:::::::L::::::::::::::::::::::::::D consensus WEDHAYDTMKGSDYLGDAPAIETLAQDAPEEVIQLEHWGMPFSREDDGRVSQRPFGGLSF #oth .22..........1.1....21111321.2111211...11...11..1........1.1 VNG1306 :::::::::::::::::::::D:F:KT::D:::::::::::::::::::::::::::::: hla1262 ::::::::::::::::::::V:A:CRES:::::R:::::::::::::::::::::::::: Hut0488 :Q:::::::::::F:::::::::::S::::D::::D:::::::::E::T::::::::::Y HQ2994A :::::::::::::::::::::::::::S::::::::::::A:::D::::::::::::::: HVO_2808 :::::::::::::::A::::A:::CK:S:K:T:K::::::A:::D::::::::::::::: Hbo2546 ::Q:::::::::::::::::::::C::S:::::::::::LA:::D::::::::::::M:: NP4264A ::L::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC1097 :DL::::::::::::::::::D:F:K:::::::::::::::::::::::::::::::::Y Hmu1786 ::L::::::::::::::::::D:F::::::::V:I::::::::::::::::::::::M:: consensus PRTTYAGAETGHHLLHTMYEQVVKRGIEVYDEWYVTELAVTDEDDPEDRTCHGVVAYDIQ #oth ............11...1...2.....2..1.11.34...1.213.21.4...3111112 VNG1306 :::::::::::::M:::L:::::::::::::::::S::::::::N:N::E::::::W:V: hla1262 ::::::::::::QM:::::::::::::T:::::H:M::::::::::A::::::::::::: Hut0488 ::::::::::::::::::::::::::::::E:::::D:::::D:::::::::::A::::K HQ2994A ::::::::::::Q::::::::L:::::::::::H:LD:::::DER::::R:::::G:::: HVO_2808 ::::::::::::Q::::::::L:::::K:::::H::R:::S::EK::::::::I::::V: Hbo2546 ::::::::::::Q::::::::L::::::::::::::R:::S::E:::::::::::::::K NP4264A :::::::::::::::::::::::::::K::::F::S::::::H::::::E:::C:::::K rrnAC1097 :::::::::::::::::::::A::::::::::::::Q:::::H::::::V:::C:::::K Hmu1786 ::::::::::::::::::::::::::::::::::::N:::::H::::E:H:::A:::E:A consensus SGEIEGFRARNGVILATGGLGQVFDHTTNAVANTGDGVAMAYRAGVPMEDMEFIQFHPTT #oth 1.4141.5.432.......4..11.............3.......1.2....11.....1 VNG1306 ::::A::K:SDS:::::::I::A::::::::::::::::::::::::V::::M::::::: hla1262 ::::S::S:K:::::::::M:::::::::::::::::::::::::::::::::::::::: Hut0488 T::V::::::EA:::::::::::::::::::::::::Q:::::::::L:::::V:::::S HQ2994A ::S::::Q:::::::::::::::Y:::::::::::::::::::::A:L:::::::::::: HVO_2808 T:QV:::::::::::::::::::Y:::::::::::::::::::::A:::::::::::::: Hbo2546 ::::SA:H:::::::::::P:::::::::::::::::P:::::::::::::::::::::: NP4264A ::D:V::::TG::::::::D:::::::::::::::::P:::::::::V:::::V:::::: rrnAC1097 :::VQ::::N::::::::::::A::::::::::::::C::::::::::::::M::::::: Hmu1786 T:NV:::W::D:::::::::::A::::::::::::::C::::::::::::::M::::::: consensus LPSTGVLISEGVRGEGGILYNDEGERFMFEHGYANNDGELASRDVVSRAELTEVNEGRGI #oth ........1.1..........321....1.1...1.2.........1......1.2...1 VNG1306 :::::::::::::::::::::G::::::::::::T::::::::::::::::::I:::::V hla1262 :::::::::::::::::::::S:::::::::::::::::::::::::::::::::::::: Hut0488 ::::::::::A:::::::::::D:::::::Y:::::E::::::::::::::::::D:::: HQ2994A ::::::::T:::::::::::::::::::Y::::::::::::::::::::::::::::::: HVO_2808 ::::::::T::::::::::::EN:::::::Y:::::L::::::::::::::::::::::: Hbo2546 ::::::::T::::::::::::ED:::::::Y::::::::::::::::::::::::::::: NP4264A :::::::::::::::::::::S::::::::Y::::::::::::::::::::::::::::: rrnAC1097 ::::::::::::::::::::::NE::::::::::::E:::::::::A::::::::::::V Hmu1786 :::::::::::::::::::::::E:::::::::::::::::::::::::::::::A:::: consensus EDEYVHLDMRHLGEERILDRLENILHLAEDFEGVDGLEEPMPVKPGQHYAMGGIETDENG #oth 2..113.......11..4.....12..11....112121.1........2...1..1.2. VNG1306 D::HIY:::::::::::T::::::::::::::::N:::::::::::::::::::::N:F: hla1262 :::::::::::::::::::::::::::::::::A:::T::::::::::::::::::N:F: Hut0488 D:::I::::::::::::M:::::MV:::A::::::A::::I::::::::Q::::::N::: HQ2994A ::::::::::::::D::T::::::I::SA:::::NP:::::::::::::::::::::::: HVO_2808 :::::::::::::::::I::::::V::S::::::NP:DA::::::::::::::::::::: Hbo2546 :::::::::::::::::I::::::V::S:::::::P:::::::::::::::::::::::: NP4264A N::::F:::::::D:::N::::::I:::::::::NPV::::::::::::H:::V::N:H: rrnAC1097 :::::D:::::::::::::::::::::::::::::::D:::::::::::::::V:::::: Hmu1786 :::::D:::::::::::::::::::::::::::::::D:::::::::::::::::::::: consensus ETCISGLYAAGECACASVHGANRLGGNALPELIVFGARAGHHAAGRDMGEAEIETGPSAE #oth ..114.......1..1.1..2...........2...11..2....2113412131.3324 VNG1306 :::V:::::::::::V:L:::::::::::::::::::L::R::::KE:ADPL::::::DA hla1262 ::V:G:::::::::::::::::::::::::::::::K:::R::::EE:::::VT::KDG: Hut0488 ::::E::::::::::V::::::::::::::::F:::K:::Y:::::::KA:::PV::::R HQ2994A ::::T:::::::::::::::S::::::::::::::::::::::::::L:R:::P::KRGD HVO_2808 ::::::::::::::::::::G:::::::::::::::K::::::::K::E::K:T::KEG: Hbo2546 ::::::::::::::::::::S:::::::::::::::K::::::::::L:::K::::QRG: NP4264A ::::D:::::::::::::::S::::::::::::::::::::::::::L:T::VP:::::: rrnAC1097 ::::D:::::::T::V:L::::::::::::::L::::::::::::K::KT:::Q:::::K Hmu1786 ::::::::::::T::V:L::::::::::::::L::::::::::::K::KT::::::R::K consensus WEPGD-VEPPVEPGAVDA-G-GDVAADGGA----------AAVEPTEVVERAVETERERI #oth 4.642122421231455612542211..13333311111334631433125233512321 VNG1306 L:HDE:LSV:TGAPDG::::VAEP:T::::QGAV::::::DTRA::D::ADTAT::E::: hla1262 :::A::Y:FE::V:ETG-::QDPA::::::::::::::::V:TD:DG:L:AE::SAKD:V Hut0488 T:TS:::S:A:D::T:EG:ASD:::::::-::::::::::VTAD::A::::E:::::::: HQ2994A ::::A::DT:::::S:RP:S:::AV::::TAAAS:::::T::QS::GL::::T:EA:THV HVO_2808 Y:L:E::DS:::L:EAGI:::E:AV::::TAADA:::::G:S:SGADL:Q::::D:::T: Hbo2546 ::V:E:::T:::::::SS:::E::V:::::AA::::::::GSLSGE:Y:Q::LDA::::V NP4264A T:REEGL:T::D:::L:T::DS::::::--:::::::::::L:::D:L::Q::::::Q:V rrnAC1097 S::::::::::D:::I:::SS:::::::--::::::::::::I::KA:L:ST::Q::Q:: Hmu1786 S:D::::S:::::::IT:N:E::::::::ERSSSDRRSDA:M:::K:TL:HT:QQ::::: consensus ESLLE-RDGINHAEIRADVQQTMTENVNVFREEEGLKEALRDIREARERYQDVAVADPSR #oth 15.13341.311112.351.32..41.....2133.2411321251.25.22.3.3.2.. VNG1306 :A::GRE::V:::DV:::L::S:::::::::T:D:::Q::A::QD::K:::::Y:::K:: hla1262 :E::S::K:R::::T:SK::::::A::::::::GR:E:T:S:LH::::T:K::::S:::: Hut0488 :G:::::::T::::V::E::E::::H:::::T:D::ET::EELQK::RA::::::E:::: HQ2994A D:::AND::R::S:::DA::S:::::::::::::S::Q:VE:::N::RA::N:G:::Q:: HVO_2808 DT:::RE:::QQ::::ER::KS::R::::::::SA::D::::::::::L::Q:F:G:K:: Hbo2546 :::::KD::VQ::::::E::::::QH::::::KD::::::::::K:::K:E::Y:::K:: NP4264A :E::::S:::::::::E:L:KA::::::::::::::::::EV:::C:::::N:::S:::: rrnAC1097 :D:I::S:::::::V:::::E:::D::::::T::::EK::::L:S::KE:EN:::E:::: Hmu1786 ::::::A:::::::V:SN::E::::::::::K::S:ND::::L:R:::::E::::::::: consensus TFNTDLIHTIETRNILDVAEAITLGALARDEFRGAHWRKEHQERKDDEWLKHTMLSWNDG #oth .1....21.2.1..11.3..2112.....4........213.1.2.23.1...121.11. VNG1306 ::::::Q:::::::L:::::M::I::::::::::::::::::::::::::::::V::::: hla1262 :::::::::M:::::::I:::L:M:::::R::::::::::R:::D:EN:::::LV::::: Hut0488 :::::::::L:::::I:L::T:A::::::T::::::::A:::T:::::::::::IA:D:: HQ2994A ::::::L::::::::I:L:::::::::::::::::::::QY:::D:QS:::::L:::::: HVO_2808 ::::::LQ:L:M:::::I:::::::::::N::::::::::Y:::R:E::::::::::::: Hbo2546 :::::::::::::::::T:::::::::::::::::::::::::::::K:::::L:::::: NP4264A ::::::::::::::LI::::T::::::::E::::::::QQY:::R:::::::::I::::: rrnAC1097 :Y:::::::::::::::::::::::::::E::::::::A:::::::E::I:::::A::E: Hmu1786 :Y:::::::::::::::::::::::::::E::::::::A:F:::R:E::I:::::A:D:: consensus DPELWYKPVILEGENKTYEPKTRSY #oth 512.112.12.113422...14... VNG1306 ::D:::R::L:::HDD::::::::: hla1262 E:::::::T:::::::::::::::: Hut0488 :LD:YFV::::D::::::::VD::: HQ2994A S:::::::::::::S:K::::I::: HVO_2808 R:::::::::::::::::::::::: Hbo2546 E:::::R::V:::::::::::V::: NP4264A S:K:Y:::::::::::E::::V::: rrnAC1097 Q:::Y::::::::DEE:::::V::: Hmu1786 T:::Y::::L::SQW:E::::E:::