|
Pairwise sequence scores | ||||||||
---|---|---|---|---|---|---|---|---|
Consensus score | 2729 | VNG0446 | rrnAC0917 | Hmu1593 | HQ1663A | hla2519 | HVO_1083 | Hbo0588 |
1868 | VNG0446 | 2710 | 1552 | 1476 | 1571 | 1651 | 1663 | 1703 |
2094 | rrnAC0917 | 1552 | 2969 | 2063 | 1657 | 1707 | 1859 | 1809 |
1994 | Hmu1593 | 1476 | 2063 | 2765 | 1598 | 1737 | 1754 | 1750 |
1988 | HQ1663A | 1571 | 1657 | 1598 | 2739 | 1804 | 1750 | 1874 |
2282 | hla2519 | 1651 | 1707 | 1737 | 1804 | 3006 | 2008 | 2022 |
2260 | HVO_1083 | 1663 | 1859 | 1754 | 1750 | 2008 | 2736 | 2058 |
2220 | Hbo0588 | 1703 | 1809 | 1750 | 1874 | 2022 | 2058 | 2748 |
394 symbols consensus -------------------------------MKAIAVSRGDDEPVLIEKPRPEPDPGEAL #oth 1111112222222222222122222222222.41121522324.423111..2.43.11. VNG0446 ::::::::::::::::::::::::::::::::D::V::KA:RT:R:VDR:::D:T::SV: rrnAC0917 ::::::MRPSASVGQRPEERLNPQCSHSLPG::V:G:T:D::G:Q:L:RE::S::::::: Hmu1593 ::::::::::::::::::::::::::::::::::V:IR::S:::E:::::::::KH:::: HQ1663A ::::::::::::::::::::::::::::::::Q::::::DSKG:IC::::::::E::::: hla2519 VCDEEKPAVGSCRFFTHNKRNLLVTDCQGHC:N::::YD:A::::VT:::::::A::::: HVO_1083 :::::::::::::::::::::::::::::::::::::E::E:K::V:::::::::A:::: Hbo0588 ::::::::::::::::::::::::::::::::R::::KK:ERR:::VD::::::ET:::: consensus VRTLRVGVDGTDHEVIAGSHGGFPEGEDHLVLGHEAVGVVEDPNDTGLEAGDVVVPTVRR #oth 1......1......112.21.12.211.1111....1...21.22.3123.23.1.1... VNG0446 ::::::::::::::::::T::::::DA:E:::::::I:::A::T::RFS::QL:A::::: rrnAC0917 :::::::::::::::LN:::::::D:A::MI::::::::::E::G::::::Q::A::::: Hmu1593 :::::::::::::::LS::::::::::::M:M::::::::::::G:::DE:QY::::::: HQ1663A I::::::I::::::I::::Y:EY:AD:::::::::::::::::GT::::R:E::A:I::: hla2519 ::::::::::::::::S:::::S::::::::::::::::::E:T::PF:V::I::::::: HVO_1083 ::::::::::::::::::G:::::::::::::::::::::V:::::E::E::I::::::: Hbo0588 ::::::::::::::::S:G:::::D:::::::::::::::::::G:RF:::::::::::: consensus PP-NGTNEYFRRGEPDMAPDGEYHERGIVGAHGFMAEYFTSPADFLVPIPASLAELGFLV #oth 212224221.3111....12.4.4....2.31.11111.1.2223.1521623144.112 VNG0446 :R:GDPTPQ:D::Q::::AP:T:V::::D::D::::D:::::::A::AL:D:::AH:::T rrnAC0917 K:NGE::::::::::::::::::T::::::D:::::::::::::::::V:K:V::Y:::: Hmu1593 K:NGE:::::::N::::::::::F::::::E::Y:S::::::::::I::E:EI:PY:IF: HQ1663A S::::ESV::D::::::::E:S::::::I:S::YFS:F:::Q:QH::S::S:::QV:::: hla2519 :::::A::::A::::::::::Q:::::::::::::::::::::E:::E::PA:::W:::: HVO_1083 ::AS::::::EENQ:::::::M:A:::::::::::S::::::S:Y::R::R:Q::::::I Hbo0588 :::::G::::E::::::::E:M::::::::E::::::::V:HEQY::Q::E::TD::::I consensus EPLSITEKAIEHAYASRSAFDWEPESALVLGNGSLGLLTLAML---DDGYDRLYCLGRRD #oth ..2.221..4.1.3.1.12.2.3.3..31....1....111513133332123..1...2 VNG0446 ::V:VA:::::L:L::::::::R:D::::::::::::::::I:A:AR:DTET:::::::S rrnAC0917 :::::::::N:::::T:EP:::R:D::C::::::::::::W::::::QE:::T::V:::: Hmu1593 ::::N::::L:::R:T::::::Y::::A:::::P::::::WQ::::TQEF::T::::::: HQ1663A ::::VVN::::L:T::::S:T:::T:::::::::::::M::HIT:ST:T:E:C::::::: hla2519 ::V::A::::::::::::::H:::::::I::::::::::V:T:::::::F::I::::::E HVO_1083 ::I::::::R::::::::::::N:S::::::::::::::::::RAD:K::ED:::::::: Hbo0588 ::I::::::V:L::::::S:T::::::I:::::::::::::L:R:DKL:::::::::::: consensus RPDPTIDIIERLGATYVDSRETPVDEIPAAHEPMDFIYEATGYAPHAFDTVDALAPNGVG #oth .....111.13211..11.12...442.322141.312....211..13214..111..1 VNG0446 ::::::::::::::::I:::T:::AD:::::Q:V:MV:::::H:K::::AI:::::A::A rrnAC0917 :::::V:::DEI:S::::::::::::L:G:Y:A::Y::::::F:::::Q::K::DQ:::: Hmu1593 ::::::EF:DEV::::I:::::::::::DE::G:::::::::::::::E::Q:::::::: HQ1663A ::::::::::::::::::::K::::M::STY:S::::C::::H:::::K:I::::::::: hla2519 ::::::::::S:D::::N:N::::PSV:::::::::VF::::::::::E:IE:::::::: HVO_1083 ::::::::::K:::::::::::::E:::G:::D:::::::::FPK::IQS:Q:::::::A Hbo0588 ::::::::::K:::::::::::::SAV:DEF:S::LV:::::::K::::S:R:::::::A consensus ALLGVPGS-WEFEIDGGALHREIVLHNKALVGSVNSHVRHFEAAVDTLAALPEWFLDDLV #oth 2...1.33113..111142.223..1..113.1..1234..3413332443132131311 VNG0446 ::::::AAG:T::VP:SD:::SL::E:::V::::::NA:::R::A:::::::D:LC:AI: rrnAC0917 V:::I:EP:::::V:::S::N:::::::C:I:T:::::S:::D::E::QE::A:L::::: Hmu1593 ::::I:::::D::::::S::ND::::::C:F::::AGI:::AEGAAVVE:M:DDL::H:: HQ1663A ::::::E::SS:::::::::N:L:::::::I:::::NIT::KT:S:D:QTF::::I:S:I hla2519 :::::::D:::::::::R::::F:::::::::::::GYE:::::::S:SRFS:T:::::: HVO_1083 ::::::SD:::::V:A::F:::M:::::::::::::::K:::::TV:FTK::R:::R::: Hbo0588 T::::::::::::::::EI:K:::::::::L:::::::K:::S:::::::Y::::T:::: consensus TGVHDLDEFEAAFE-DDDTTIKTAVEFDTY---- #oth .3.32233123..3111112..121113241111 VNG0446 :::::TAA:AD::R::GE:S:::::Q:::R:::: rrnAC0917 :T:T:PEHV:::::::G:DQ::AV::::SL:::: Hmu1593 :T:T:PENV:P:::::G:DQ::AI:::ESP:::: HQ1663A :D:YP:S::RY::DNN:::::::::QLSA:EER: hla2519 ::::G::::::::A:::::::::::::G::EER: HVO_1083 ::::P:S:::::::::::::::::I::G:V:::: Hbo0588 :S:C:::N:A:::::::::::::::Q:S::EERR