| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 5205 | VNG0303 | HVO_0783 | hla2290 | Hbo0751 | HQ1163A | Hut0551 | NP0910A | rrnAC1914 | Hmu0664 |
| 4180 | VNG0303 | 5220 | 3878 | 3926 | 3856 | 3826 | 3840 | 3933 | 3915 | 3927 |
| 4540 | HVO_0783 | 3878 | 5159 | 4323 | 4383 | 4299 | 3993 | 4158 | 4155 | 4138 |
| 4532 | hla2290 | 3926 | 4323 | 5701 | 4371 | 4408 | 3938 | 4164 | 4034 | 4079 |
| 4555 | Hbo0751 | 3856 | 4383 | 4371 | 5167 | 4583 | 4014 | 4174 | 4040 | 4164 |
| 4496 | HQ1163A | 3826 | 4299 | 4408 | 4583 | 5582 | 3963 | 4061 | 4065 | 4120 |
| 4311 | Hut0551 | 3840 | 3993 | 3938 | 4014 | 3963 | 5249 | 4103 | 4195 | 4140 |
| 4488 | NP0910A | 3933 | 4158 | 4164 | 4174 | 4061 | 4103 | 5391 | 4344 | 4241 |
| 4487 | rrnAC1914 | 3915 | 4155 | 4034 | 4040 | 4065 | 4195 | 4344 | 5268 | 4483 |
| 4580 | Hmu0664 | 3927 | 4138 | 4079 | 4164 | 4120 | 4140 | 4241 | 4483 | 5121 |
776 symbols consensus MSNNTDTDDTPPAEREDSPDE-----------G----------APADPSED--------- #oth ..2233422432514456344111123343342212122221223546444544433433 VNG0303 :::EST-N:A::DDDP:D:--:::::::::::-::::::::::---E::V:HD::::::: HVO_0783 :::D:N:::-SLH:::::::D:::::::::::-::::::::::::SEEGI:::::::::: hla2290 :::EK:AN:-::T:DPEE:::SGVGTPDPTGN:EDA:RDDGAR::::DGV:EPDDTGDPA Hbo0751 :::DM:::ENS:E:GT:V::::::::::::::-::::::::::V:DSS::L::::::::: HQ1163A :::D::S:EN::::GSGFT::::::TPDSSQH:DDGLSEEHAN:E:GTDT:TGANAGADG Hut0551 ::E:K::A:DA:P:H:EATVS:::::DDGQTD:::::::::::--S:A:AERSTGASSIG NP0910A :::EK:A:E:TD:DERRT:R:::::EPASSGEP::::::::::::E:RP:QPDGAVEEPR rrnAC1914 ::D:::::A::DPD::A:DAG::::EEEASTN::::::::::::KQ::N:P::::::::: Hmu0664 ::D::EI::::DD:::VTG--:::::::::::-::::::::::---T:P::::::::::: consensus -DDDSLADDPADPVD------------------------------------EADEGGDID #oth 424444524562534111111111111111121222222222233322346546465444 VNG0303 ::T:G:Q:::::S::::::::::::::::::::::::::::::::::::::D:G:VD:LE HVO_0783 ::GG::QH:E:EE::::::::::::::::::::::::::::::::::::::----KKT:: hla2290 S:EEAV::::T::DNSDEVWDDGIVVDDGPGPDDAGAGREEATGATSEGVT::N:::::: Hbo0751 :::EV:PESGP:DGA::::::::::::::::::::::::::::::::::::--:DKRT:: HQ1163A RS:::GRE:HD:RG:::::::::::::::::RDRGHDSYNDSVDTVDPDGPTDR:N:S:E Hut0551 T::RPVEETD:AD:A:::::::::::::::::::::::::::::::::::E:S:TDDEVA NP0910A AS:::VT:A:R::GQ::::::::::::::::::::::::::::RGADERLD:DEDLL:GS rrnAC1914 :ASEPS::E:S::SE:::::::::::::::::::::::::::::::::DRWAGEGETSET Hmu0664 :::H:A:::AG:T:E:::::::::::::::::::::::::::::::::::SGGA:::GL: consensus DLGSDVEVD-ADVADDVD--EDDLLGGLQIDSTADIEVPDRLVDQVIGQEHARDVVKKAA #oth 3...2.32232226425211.231....5122131131.1.........21..11131.. VNG0303 N:::::G:E:G::SI:E:NA::::::::R::D:S::T:::::::::::::A::EI::R:: HVO_0783 :::::::I::::::EN:::::N::::::::ET:DE:P::::::::::::::::::IM::: hla2290 E:::S:::EG::IDE:P:::::::::::K::T::EL:I:::::::::::::::::II::: Hbo0751 ::::::::T::::::::::::::::::::V:::SE:::::::::::::::::::::M::: HQ1163A E::::::::::E:K::::::::::::::K:S:::E:D:::::::::::::::::::M::: Hut0551 ::::::TL:DEESTVVD::::::V::::N::::E:::::E:::::::::S::::I:L::: NP0910A ::::::::E:G:IEI:EEN:::S:::::::::SD:::::::::::::::D::::I:L::: rrnAC1914 T:::::Q:::GESEL:G::::EN:::::E:E::::::::::::::::::D:::::I:::: Hmu0664 ::::E:::ESGASL::--::::G:::::G:E::S:::::::::::::::D:::::I:::: consensus KQRRHVMMIGSPGTGKSMLAKAMSQLLPKEELQDVLVYHNPDDGNEPKVRTVPAGKGEQI #oth ..1..............1......2...1.2............1.3.......1...1.. VNG0303 ::H::::::::::::::L::::::R:::::S::::::::::::S:::::::::::::::: HVO_0783 ::::::::::::::::::::::::E:::R::::::::::::::::R:::::::::::D:: hla2290 ::::::::::::::::::::::::E::::::::::::::::::::K:::::::::::D:: Hbo0751 ::::::::::::::::::::::::E::::::::::::::::::::N:::::::::::::: HQ1163A ::::::::::::::::::::::::E::::::::::::::::::::N:::::::::::D:: Hut0551 ::::::::::::::::::::::::::::::D::::::::::::::::::::::::::::: NP0910A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::D:: rrnAC1914 ::::::::::::::::::::::::::::R::::::::::::::::::::::::G:::::: Hmu0664 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus VDAHKEEARKRNQMRSFLMWIIIAIVLGYALIIAG--QVLLGILAAGVIYLAFRYGSRGS #oth .1..1......1...11....1.1223..1122331143.11211.121..2.1.32..2 VNG0303 :::::::::::::::::::::M:LLAV::::L::TPARP::AL:S:AG:::L:::TN::: HVO_0783 :E::::::::::::::::::::::V::::S::::R::::::::::::I:::::::::::: hla2290 ::::R:::::::::::L:::::::V::::::::V::::I:V::I::::V::V:::LN::: Hbo0751 :E:::::::::::::::::::::::::::::L:E:::A:::::::::::::::::::::G HQ1163A :::::::::::::::::::::::::::::S::::::::I::::::::::::::::::::G Hut0551 ::::::::::::::::::::::::::I::::F-::::NP:::V:::::::::::::A::G NP0910A :::::::::::D::::::::::::V:F:::IL::Q:::L::::I:::I:::::K:M:::: rrnAC1914 :E:::::::::::::T::::::::::I:::::LVQ::::::::::::::::::::::::: Hmu0664 :::::::::::::::T:::::::::II::::::Q:::S:::::::::::::::::::::N consensus DAMIPNLLVNNADQQTAPFEDATGAHAGALLGDVRHDPFQSGGMETPSHDRVEPGAIHKA #oth .1.1.1.211111332...21........1..............1....1...1.1.111 VNG0303 :::V:K::I::::R:V:::::::::::::M::::::::::::::A::::E:::A:S:Q:: HVO_0783 :::::::I::::::KS:::Q:::::::::::::::::::::::::::::::::::::::S hla2290 :::::::::::G:TK::::R:::::::::::::::::::::::::::::::::A:::::: Hbo0751 :::::::V:::::TT::::::::::::::::::::::::::::::::::::::::::::: HQ1163A :::::::I:::::TA::::::::::::::::::::::::::::::::::::::::S:::: Hut0551 :S::::::I:::NE::::::E::::::::::::::::::::::::::::::::A:::::: NP0910A :::V:::I:G:::::V:::::::::::::::::::::::::::::::::::::::::::: rrnAC1914 ::::::::::::N:K:::::::::::::::::::::::::::::::::::::::::::Q: Hmu0664 :S::::::::R:N:T::::::::::::::::::::::::::::::::::::::A:::::: consensus NKGVLFVDEINTLDIRSQQKLMTAIQEGEFSITGQSERSSGAMVQTEPVPTDFIMIAAGN #oth .....11.......1....1...........................1..1..1.1.... VNG0303 ::::::I:::::::V::::::::::::::::::::::::::::::::A::C::::V:::: HVO_0783 ::::::::::::::V::::H:::::::::::::::::::::::::::::::::::::::: hla2290 ::::::I::::::::::::H:::::::::::::::::::::::::::::::::V:::::: Hbo0751 ::::::I::::::::::::H:::::::::::::::::::::::::::::::::::::::: HQ1163A :::::YI::::::::::::H:::::::::::::::::::::::::::A:::::::::::: Hut0551 :::::::::::::::::::::::::::::::::::::::::::::::::::::::V:::: NP0910A :::::::::::::::::::::::::::::::::::::::::::::::::::::V:V:::: rrnAC1914 ::::::::::::::::::::::::::::::::::::::::::::::::::C::::::::: Hmu0664 ::::::::::::::::::::::::::::::::::::::::::::::::::C::::::::: consensus LDAMENMHPALRSRIKGYGYEVYMDDTIEDTPEMRRKYARFVAQEVEKDGRLPHFTAEAI #oth 1...........1...........1.....2.1....12..1....41..1..41441.1 VNG0303 M:::::::::::::::::::::::::::::::D:::::::::::::::::N::::APD:: HVO_0783 ::::::::::::::::::::::::::::::::::::::::::::::TN::::::::E::V hla2290 ::::::::::::::::::::::::E:::::::::::::V::I::::A::::::E:S:D:: Hbo0751 ::::::::::::::::::::::::::::::::::::::T:::::::Q::::::A:N:::: HQ1163A ::::::::::::::::::::::::::::::::D:::::T::I::::N::::::DYN:::: Hut0551 M:::::::::::D:::::::::::::::::D:::::::::::::::::::::::::ED:V NP0910A M:::::::::::::::::::::::::::::S:::::::::::::::TN:::::P::D::: rrnAC1914 ::::::::::::::::::::::::::::::D::::::::::I:::::N::::::::E::V Hmu0664 :::::::::::::::::::::::::::::::::::::LT::I:::::N:::::::DR::V consensus EEIILEARRRAGRKGHLTLELRNLGGLVRVAGDIARAEDADLTTREDVLQAKGRSRSIEQ #oth 2.2....1..1...21.1.21.2.......1.....21241413.31..1..4.1..... VNG0303 R:L::::K::::::DS:::K::D:::::::::::::S:GH:::Q:S:::E::K::::::: HVO_0783 ::L:::::::::::::::::F:::::::::::::::G:N:E::::DH:::::R:A::::: hla2290 ::V::::K::S::::::::LF:::::::::::::::G:::E:::::H::::::::::::: Hbo0751 ::V:::::::::::::::::::::::::::S:::::::N::FV::DH::::::::::::: HQ1163A :::::::::::::::::::::::::::::::::::::A:::YVR:DH::::::::::::: Hut0551 ::::::::::::::E::S:K:::::::::::::::::A:KEF:E::::::::D::::::: NP0910A ::V::::::::::::::S::F:D:::::::::::::::NREY:Q::::::::A::::::: rrnAC1914 Q:L::::::::::::::S:KF:D::::::::::::::::R:R:E:A::::::R::::::: Hmu0664 :::::::::::::::::::K::E::::::::::::::::Q:V:::::::::::::::::: consensus QLADDYIERRKDYELTVNDGDVVGRVNGLAVMGEDSGIMLPVMAEVTP--SQGPGQVIAT #oth .21.31.1.....1131331422..........1....11.....12.11..11.211.. VNG0303 :FV:N::Q:::::::GTTSEEA:::::::::::G:::::::::::I::AQ::EE:RIY:: HVO_0783 :I::Q::::::::::S::::F:T::::::::::::::::::::::::::::::::::::: hla2290 :::::F:::::::::Q:S::Y:::::::::::::::::::::::::A::::::::E:::: Hbo0751 :::::::Q:::::::Q:A::YQA::::::::::::::::::::::::::::::::E:::: HQ1163A :::::::::::::::Q:S::YQA::::::::::::::::::::::::::::::::::::: Hut0551 ::::N::::::::KM:::E:SA::::::::::::::::VM::::::A::::::::E:::: NP0910A ::::E:::::::::::::E:::::::::::::::::::V::::::::::::::::E:::: rrnAC1914 ::::N:::::::::::::Q:::::::::::::::::::V:::::::S::::::::::::: Hmu0664 ::::::::::::::::::E:::::::::::::::::::V::::::::::::::::::::: consensus GQLKEMAQEAVQNVSAIIKKFSDEDISEKDVHIQFVQAGEGGVDGDSASITVATAVISAL #oth .1.1.1.2.1.3..........1112.12.3.1....2112..1.....1...1.....1 VNG0303 :::::::E:::E::::::::::::NM::::T::::::::::::::::::::::::::::: HVO_0783 :::::::E:S::::::::::::NQ:L::M:::V::::T:QQ::::::::::::::::::: hla2290 :::::::::S:S::::::::::::N:::M:I::::::::QQ::::::::::::::::::: Hbo0751 :::::::::::D::::::::::::N:::R:I::::::::Q:::::::::::::::::::: HQ1163A :::::::::::D::::::::::::N:::::M::::::T:QQ::::::::::::::::::: Hut0551 :K:Q:I:M::::::::::::::::::::::I::::::SY:-::E:::::V:::::::::: NP0910A :::::::::::::::::::::::::::Q:::::::::::::::::::::::::A:::::: rrnAC1914 :::::::E:::::::::::::::::::::::::::::::::::::::::::::::::::I Hmu0664 :::::::E:::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ENVPVDQSLAMTGSLSVRGDVLPVGGVTHKIEAAAKSGCDTVIIPKANEQDVMIEDEYEE #oth .31114.32...........................2.1311...3..31.....1..11 VNG0303 :DI::A:E::::::::::::::::::::::::::::A::ER::::::::D:::::::::: HVO_0783 :DI:I:::V:::::::::::::::::::::::::::A::S:::::A::::::::::::K: hla2290 :::G::::::::::::::::::::::::::::::::A::TR::::Q::::::::::::KD Hbo0751 :E:G:::::::::::::::::::::::::::::::::::ERI:::Q::M:::::::::K: HQ1163A :::G:::::::::::::::::::::::::::::::::::ERI:::A::S::::::E:::: Hut0551 ::I::E:N::::::::::::::::::::::::::::T:L::::::::::::::::::::D NP0910A :G:::R:DM:::::::::::::::::::::::::::::L:::::::::::::::::::KD rrnAC1914 :D::IK:N::::::::::::::::::::::::::::::L::::::E::T::::::::::D Hmu0664 ::::IE:N::::::::::::::::::::::::::::::L::::::E::T::::::E:::: consensus MIEIIPVSHISEVLDVALAGEPEKDSLVDRLKSITGSALEQ--EVGVSGPSSPSPQ #oth 21111..1.1....11..2..1.....12.......2.15523453451332..1. VNG0303 Q::::::T::::::::::V:::::::::::::::::K::DSASDS:TT:-GN:::: HVO_0783 :VD:::::::::::::::E::::::::::::::::::::NK::GQ::K:::::::: hla2290 :::V:::::::::::I::E::A::::::S::::::::::KE::-G::::::::::: Hbo0751 :V:::::::::::::I::E:::::::::::::::::::FT:::-ES:::::::::: HQ1163A :V:::::::::::::I::E::A::::::A::::::::::S:SKNET:::::N:::: Hut0551 Q::::::::L::::E:::::::::::::::::::::Q:::R::---KI:QTN::L: NP0910A E:::V::::::::::::::::::::::I::::::::::::::R:::QA:S--:::: rrnAC1914 ::::::::::::::E::::::A::::::::::::::K::DH:::::RQ:-G::::: Hmu0664 ::::V:::::::::E:::::::::::::::::::::K:::R:::::QQS-G:::::