|
Pairwise sequence scores | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3022 | VNG2502 | HVO_2481 | Hbo2380 | VNG1537 | hla1684 | NP2030A | HQ3011A | HVO_2482 | Hbo2381 | Hut1451 | rrnAC3549 | Hmu1283 |
1992 | VNG2502 | 2978 | 1819 | 1774 | 1820 | 1670 | 1672 | 1728 | 1722 | 1816 | 1787 | 1843 | 1754 |
2025 | HVO_2481 | 1819 | 2933 | 2273 | 1649 | 1721 | 1725 | 1747 | 1862 | 1793 | 1827 | 1779 | 1753 |
2001 | Hbo2380 | 1774 | 2273 | 2929 | 1642 | 1729 | 1748 | 1733 | 1807 | 1743 | 1811 | 1722 | 1781 |
2238 | VNG1537 | 1820 | 1649 | 1642 | 3078 | 1953 | 1956 | 1979 | 2013 | 2000 | 1968 | 2014 | 2025 |
2283 | hla1684 | 1670 | 1721 | 1729 | 1953 | 3131 | 2025 | 2050 | 2135 | 2160 | 1910 | 2111 | 1968 |
2264 | NP2030A | 1672 | 1725 | 1748 | 1956 | 2025 | 3026 | 1982 | 2042 | 2134 | 1979 | 2099 | 2113 |
2373 | HQ3011A | 1728 | 1747 | 1733 | 1979 | 2050 | 1982 | 3084 | 2169 | 2232 | 1947 | 2118 | 2036 |
2431 | HVO_2482 | 1722 | 1862 | 1807 | 2013 | 2135 | 2042 | 2169 | 3027 | 2373 | 2074 | 2195 | 2105 |
2462 | Hbo2381 | 1816 | 1793 | 1743 | 2000 | 2160 | 2134 | 2232 | 2373 | 3075 | 2057 | 2196 | 2149 |
2356 | Hut1451 | 1787 | 1827 | 1811 | 1968 | 1910 | 1979 | 1947 | 2074 | 2057 | 3037 | 2303 | 2253 |
2524 | rrnAC3549 | 1843 | 1779 | 1722 | 2014 | 2111 | 2099 | 2118 | 2195 | 2196 | 2303 | 3065 | 2442 |
2469 | Hmu1283 | 1754 | 1753 | 1781 | 2025 | 1968 | 2113 | 2036 | 2105 | 2149 | 2253 | 2442 | 3062 |
420 symbols consensus -MTTIKDSVHDHIEVEGVAAALLDTPPVQRLRHIKQLGTVRLVYPSANHTRFEHSLGVYH #oth 11511..1...1.33312133.1..124.1..213..1.151...1.1............ VNG2502 ::RA:::::::Y::AD:::::::::E:::::::::::S:I:::::::::::::::::::: HVO_2481 :::AV::::::Y:SLDP:::E:V:::AF:::::::::S:::::::::S:::::::::::: Hbo2380 :::AV::::::Y:SLDPL:QD:V:::EF:::::::::S:::::::::::::::::::::: VNG1537 MT:::::::::::::T::V::::::::L::::NVA:::::S::::::::::::::::::: hla1684 ::I:V::T::::::ID::::D:::::A::::::V::::::Q::::::::::::::::::: NP2030A ::V::::::::::T::::::D:::::A:::::R:T:::::EY:::::::::::::::::: HQ3011A ::::::::::::::IQ:::::::::::I::::RVT:::::H::::A:::::::::::::: HVO_2482 :::::::::::::::::A:E::::::EM:H::::::::::Q::::::::::::::::::: Hbo2381 ::A::::::::::::::::E:::::EE:::::::::::::Q::::::::::::::::::: Hut1451 ::K::::::::Y:::::::LS::::::L:::::VS:::::T::::::::::::::::::: rrnAC3549 :::::::::::::::Q::::::::::::::::::S:::::T::::::::::::::::::: Hmu1283 :::::::::::::A:::::E::::::::::::R:A:::::T::::::::::::::::::: consensus LADRALSHLGIEGQRAERVRAAALLHDIGHGPYSHNVEAVIHRRTGKYHDDVHDLLAEGA #oth .1321.51.124.5314221...2...1..2.11.13.5225.31134..1154125626 VNG2502 ::::::A::D:S:T::DT:::::::::::::::G:QT:GI:Q::LDRH::::AH:VSN:E HVO_2481 ::S:::::::VD:D::AH:::::::::::::::G:QT:DL:R::::RD::EI:H::DGT: Hbo2380 ::S:::DY:D:G:D::RH:::::::::::::::G:QT:E::R::::AH::EIGH::D:TD VNG1537 ::::::D::::T::::T::::::I::::::::F:::::D::E:H::NR:::::::V:S:Q hla1684 ::S:::G::::G:K::D:IE:::M:::V::::F:::L:SLT:::::::::::DEV::T:: NP2030A ::T:::D::::::TQ:::L::::I::::::T:::::I::LVA:::::L::E:E:::ET:D HQ3011A :MN::::::DLD:P::::L::::::::V::S:::::L:P::::Y::::::::TN::VDS: HVO_2482 ::S::::::::::DA:AH:E:::::::V::::::::I:D:T::H::::::::EG:V:R:T Hbo2381 ::S:::T::::::VQ:::I::::::::V::::::::I:S:TY:Y:::::::::E:I:::S Hut1451 :::Q::E::::S::QG::::::::::::::::::::::GL:::H:::::::::::IG::Q rrnAC3549 ::::V:::::::::Q::::::::::::V::S::::::::L::::::::::::DE::GD:P Hmu1283 :::E::G:::::::K::::::::::::V::S::::::::::Y:E::::::::::::DR:E consensus VARVLADHDLDPDRVAALVAGDGE-LGQLVSGELDVDRMDYLVRDAHHTGVPYGTIDHER #oth 1151.5341221431.2113.3.31212.11...............1..........21. VNG2502 PGA:::A:G::::::::::::H:K::::::A:::::::::::::::::::::::::::G: HVO_2481 :GD::T::G:::::::DM:D:A:G::::::::::::::::::::::::::::::::::G: Hbo2380 ::A::VA:::N:::I::::R:::::::::::::::::::::::::::::::::::::TG: VNG1537 ::S::::::IQ:AEI:::::::::P:A:::A:::::::::::::::::::::::::::G: hla1684 :GE::R::::::EKI:G::::E:P:Y:G::::::::::::::::::Y::::::::::T:: NP2030A :::T::L::I::SA::D:I::::::F:P:::::::::::::::::::::::::::::AG: HQ3011A :GDT:S:RGY::E:I:::IR:::K:Y:::I:::::::::::::::::::::::::::::: HVO_2482 :GET:E:EG:::E::::::E:::::F:::::::::::::::::::::::::::::::::: Hbo2381 :GQ::R:N::::N:I:D::::E:K:Y:::::::::::::::::::::::::::::::::: Hut1451 :::::TEAG:N::A::D:::::::::::::::::::::::::::::::::::::::::G: rrnAC3549 :::::TE:G:N:::::G::::E:::::::::::::::::::::::::::::::::::::: Hmu1283 :::::::::::H:A::D::::::::::::::::::::::::::::::::::::::::::: consensus LIRELTFVD-----GELVLAEGNVQTAESLLLARALMNPTVYRHHVARIAKAMLRRASER #oth 12.2.212.1111111...22...11...1.11....121..4...1..112..211224 VNG2502 :L:A:::R:::::::D::::::::A::::V:VG:::::A:::::::S:::G:::D:::A: HVO_2481 :V:::RYR::::::::::::::::::::::::::::::A:::::::S:::G:::E::::: Hbo2380 :V:::RYR::::::::::::D:::::::::::::::::G:::::::S:::G:::E::::: VNG1537 :::G:::I:::::::D:::GA::::S::::::::::::::::S::::::S:S:::::A:T hla1684 FV:::::::VGTGTN::::D:::::::::::::::::::V::T::::::S:::::::ASD NP2030A :::::R:::::::::::::::::::::::::V:::::::V::N::::::S:::::::T:Q HQ3011A :::A::::::::::::::::A::::::::::::::::::::::::::::S:T:::::A:Q HVO_2482 ::::::::::::::::::::::::::::::::::::::::::Q::::::S:::::::::: Hbo2381 :::::::::::::::::::D::::::::::::::::::::::Q::::::S:::::Q:T:: Hut1451 :V:::R:R:::::::::::::::::::::::::::::T::::S:::::::::::::G:A: rrnAC3549 :V:::C:::::::::::::D::::::::::::::::::::::Q::::::::S::::GT:E Hmu1283 :::::R:::::::::D:::D:::::::::::::::::::::::::::::::T::::GT:: consensus LL--DATDTTAEELRRMDDHDLLVALRSTDATADLARRLDRRDLYKRAVWAELDAVPDDV #oth .21134353424412.22.421322117454156526.266.2.1...1.11564.2332 VNG2502 :::::T::LD::TFA:FT:A:::AV::DCP::Q:A:::IRN:::::::::T:R::::::: HVO_2481 :V:::DG-VPI:SFV::A::::::::--GERVP::G::IE:::::::::::PI::::T:: Hbo2380 :::::TGEVGID:F:::A::::::S:--SEHVP::G::IE:::::::::::P:AS::AS: VNG1537 ::::AT::V::PA:::::::::VA:::AH:::SRV:A::FE::::::::::::GD:D::L hla1684 :::::::T::PAQ::::::::F:A:I::CSE::E:S::Y:E:::::::::::Y:D:AER: NP2030A ::::T:GV:D::T::::::AA:RS:::DCA:::P::T:::::T::::::::::RD::::I HQ3011A :ITT:T:AI::SQ:::::::::H::::::K::THI:S:::T:::::::::::::T::ES: HVO_2482 :::::E-:ID:::::::::P:::::::L::S:SAF:E::AT::::::::::::PN:::SI Hbo2381 :::::QP:L::A:::::::::::A:::M:PE:KPF:D:::S:::F:::::::M::::::: Hut1451 ::::EE:E:SP:TF:::::AE::::::::EE::EIG:::TY:::::::::::RG:::A:L rrnAC3549 ::::A:::::::T:::W::N:::::::QC::::AY::::SQ:::::::::::WQ::::E: Hmu1283 ::::E::::DPA::::W::S::::S::R:::::GY:H::TE:R:::::I:::MT::::EL consensus VAADHDTIRAFERAIADAAGVDPEAVILDVPSRPSMTESSSRVVVNGEVRRLEEQSPLVS #oth 452235363461251.241224454.22.3124.124..232.4.2.4313.442.2..7 VNG2502 AT::YR:V:DL:SQV::::::PAT::VI:T:GA:::P:::V::T:::DT:::D::::::D HVO_2481 :ELGFEGT::A::D:::::D:P::S::V:A::::RIK::R:::::::V:::::DA:E::G Hbo2380 :EM:YAET:SAA:E:::K:::E:DE:LV:::::::FK::RT::I:::V:Q::::A:E::A VNG1537 :G:::::V:G::::::AD:::PERD::V:A::E:::P:::TG:L::::::::H:::T::T hla1684 HE:::::ES:L::E::EE:::ARQH::::::PE:::R::TA::T:::::::::R:::::: NP2030A :D:::E:C:EH:::::ER:::::A:::I::::::::R::T:::::G::::T:GS::T::A HQ3011A IN:::::::S:::TV::RV:L:S:E::I:I:GH::::::::::::S::::::AD:::::: HVO_2482 ID:E::ALA::::D::A::D:S::S::::::::::::::::::M::::M:Q::RE::::Q Hbo2381 ID:::T:Y:D::SR::AR:DI:::S::V:::::::::::T:::M:S::I:::GK:::::: Hut1451 L:MEQGA::ER:::::AD::::::::::::APD:::A::::Q:L:::T::::::::T::R rrnAC3549 L:::::AVG:M:Q::::E:N::SD::V::I:PE::::::::::L:::G::::G:::T::N Hmu1283 L:M::AE::EE::::::::N::AD::L::::GE:::P:::::::::::::G:G:::T::T consensus ALRAAQRDQWRLGVYAPAAETDRVGRAAVRVLGLDIDGALVSDVR--GVHATLDEF---- #oth 222321251..2...2.543424125213241..34222425244714463422316211 VNG2502 GML:S::A:::F:::T:DDHVPA:AA::E:T:::-----------:::PIDDPPA-:::: HVO_2481 :::S:E:T:::::::::E:VR:E:AA:::DA:::-----------::P:RV:TPT-:::: Hbo2380 G::::E:T:::I::::::EAA:D:RD::AD::::A----------::E:RVG:A:-:::: VNG1537 ::QT:::E:::::::T:R:H::V::::TE::::::P:DG::TE:N::APDDSPPG:SE:: hla1684 T::T:::N:::::::::HPA::::::::AD:::::P::-::AE::G:AMPT:::::RDGA NP2030A :::RT::E:::::::::E::::A::S::EDI::::L:-:::V:::Q:::NTR::::QE:: HQ3011A :::T::KQ:::::::V::TA:::A:ID::ETM::::S::P:::IQHKT:T::::::SD:: HVO_2482 :::T::EQ:::::::::RE::E::::::AD:::::V:::::AE::S::LN::::::E::: Hbo2381 :::T::KQ:::F::::::D:::A::::::EEM:::::D::I::::H::::T:::::AE:: Hut1451 ::Q:::::R::::::::TDVRE:::D::::T::::::::R:::TPR::I:::::::E::: rrnAC3549 :I:::::::::::::::D::SE:::A::I:E::::L:::R:R:::T::I:::::::N::: Hmu1283 :::::::::::::::::E:VA::::ER:I:::::EP:::M:R:A:P::::::::::N:::