| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3450 | NP4676A | VNG2276 | Hmu2728 | rrnAC2568 | Hut0764 | hla0636 | HQ3673A | Hbo1326 | HVO_0199 |
| 2037 | NP4676A | 3758 | 1768 | 1783 | 1710 | 1136 | 1872 | 1763 | 1747 | 1788 |
| 2471 | VNG2276 | 1768 | 3472 | 2004 | 2011 | 1228 | 2109 | 2043 | 2178 | 2136 |
| 2549 | Hmu2728 | 1783 | 2004 | 3626 | 2461 | 1211 | 2254 | 2045 | 2203 | 2202 |
| 2529 | rrnAC2568 | 1710 | 2011 | 2461 | 3653 | 1265 | 2142 | 1990 | 2123 | 2225 |
| 1483 | Hut0764 | 1136 | 1228 | 1211 | 1265 | 1937 | 1254 | 1276 | 1330 | 1283 |
| 2754 | hla0636 | 1872 | 2109 | 2254 | 2142 | 1254 | 4218 | 2411 | 2483 | 2572 |
| 2650 | HQ3673A | 1763 | 2043 | 2045 | 1990 | 1276 | 2411 | 3426 | 2684 | 2627 |
| 2809 | Hbo1326 | 1747 | 2178 | 2203 | 2123 | 1330 | 2483 | 2684 | 3433 | 2782 |
| 2858 | HVO_0199 | 1788 | 2136 | 2202 | 2225 | 1283 | 2572 | 2627 | 2782 | 3427 |
608 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 NP4676A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2276 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2728 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2568 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut0764 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0636 VPRSIIPVSAPASAAASSATDSAARVVLSALRLPETATIRVIRRVRGERPKTRAVYERRI HQ3673A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1326 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0199 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -------------------------------------MEAIAFGTDGWRATLDTFTDDRV #oth 111111111111111222222221222222223332353612111111122234214412 NP4676A ::::::::::::::::::::::::::::::::MDTANI:T:::::::::D:REAL:PI:L VNG2276 ::::::::::::::::::::::::::::::::::::MD:V:S::::::::P:SE::S::: Hmu2728 ::::::::::::::::::::::::::::::::MTDADA:::::::::::::::E:::E:: rrnAC2568 :::::::::::::::MRRDFLSGGREPRDMDNDADVDAG::::::::::::::V::KP:: Hut0764 :::::::::::::::::::::::::::::::::::::----------------------- hla0636 SRSHRLFINLHRQLVPATSVTGKGTPGIIVPAADVVDVDQ:::::::::::::::::::: HQ3673A :::::::::::::::::::::::::::::::::::::::H:S:::::::::::::::::: Hbo1326 ::::::::::::::::::::::::::::::::::::::D::S:::::::::::::::E:: HVO_0199 ::::::::::::::::::::::::::::::::::::::DE:S:::::::::::::::::: consensus RIVGQAVADHLAAEGHDA-PVAVGYDARETSEGFAESLAEVLAANGFDVLLPERDCPTPL #oth 241222123424351663221421111133262214331522321121132221131114 NP4676A QA:AA::STVV:ER:RRED:::::::::AGASEA:REV:AG:::::H:::FA:::::::A VNG2276 :::A:G:::::::D:GAGDT::::::::D::A:::ADA:D:::::::::V:::::::::A Hmu2728 :M:::G::T::RES:::GET::::::::AH:R::::E::R::C::::::V::D::T:::V rrnAC2568 :M::::::TT::ER:ASG:T::I::::::::P:::DE::H::R:::::::::D::T:::I Hut0764 ------------------:----------------------------------------- hla0636 :::::::::::::A:::E:::::::::::::::::::::::::G:::::::::::T:::V HQ3673A ::::::::NY:H:::FT::::V:::::::::::::::::::::G:::::I:::::R:::: Hbo1326 :::::::::Y:SD::YE::::F::::::D::L:::::::::::G::::::::D::R:::: HVO_0199 :V:::::::Y::D::FT::::L:::::::::P:::::::::V:G:::::::::::::::: consensus VAYAIVDRGLAGALMITASHNPPEYNGVKFIPADGAPALPDVTDAVEARLAEPDLLPEDE #oth 324224314121134211111222221.11115213112255133344314532332442 NP4676A L:::V:::D:::::T::::::::SDS::::::E:::::R:KQ:::I:TA:QSV:IP:LAP VNG2276 :SH:::E:D::::VV:::::::::::::::::::::G:::SD::GIM:N:GT:--AAG:P Hmu2728 ::WTVES::::::::V::::::::::::::V::G:Q:::A:A::::::A::R::P:::P: rrnAC2568 L:WTVK::::::::Q:::::::::::::::::G::S:::::W:A:F:EN::VL:P::::: Hut0764 ---------------------------:TT:RRSAV:----------------------- hla0636 I::::::::::::C:V::::::::::::::::H:::::::A::ED:V:::::::::::A: HQ3673A ::T:V:E:E::::::::::::SA:::::::::S:::::::S:::::AN::T::E:A:VS: Hbo1326 ::H:::E:N::::::V::::::::::::::::::::::::Y::E:IVE:::::::::::: HVO_0199 :::::A::::S::::V::::::::::::::::S:::::::::::::AE::::::::::S: consensus W-----------------------------GEIERVDLVGPHADHARELVDA-------D #oth 511111111111111111111111111111144423146533532354432412222212 NP4676A KPDIGPKPLATEAQITDGATESPVRDRPLS:HC:E::FCR::V:AVL:RLG::::::::: VNG2276 T::::::::::::::::::::::::::::::::R:::FT:::VA:C:R:::::::::::S Hmu2728 :::::::::::::::::::::::::::::::SV:ET::LAAYL:::V:FAGE:SRDDPV: rrnAC2568 ::::::::::::::::::::::::::::::::RTEE::I::FH:::LDF::T:::::::: Hut0764 -:::::::::::::::::::::::::::::----------------------:::::::- hla0636 H:::::::::::::::::::::::::::::::VS:::::SD:::A:::V:G:ATGGNGV: HQ3673A :::::::::::::::::::::::::::::::TV:::::QT:::EA:HS:::T:::::::: Hbo1326 R::::::::::::::::::::::::::::::S::E::I:T::FE:::::::::::::::: HVO_0199 R::::::::::::::::::::::::::::::T:::::V:S::::::MD::GD:::::::: consensus LDGLTVAYDAMHGSGRGVTDALLEAAGADVVRLRCERDADFGGGPPEPSAENLEALVDAV #oth 142222221122111112133213411122434234214411153.1.2222233.3231 NP4676A :E:V:::::::Y:::::C:::A:A::::::I::::G::PT::::A:N:TPGR:A::T:R: VNG2276 ::::::V::::::::::::GDA::::::::I:R::TQ::A:::T::::TP:H:AG:A::: Hmu2728 ::::::::::::::::::::R:::R::::L::::::::::::::A:::V::RV:::IER: rrnAC2568 ::D:S:::::LY::::::::::::::::::T::N::Q:PE::::S:::::::A:G::GE: Hut0764 --------------------------------------------H::::::::::::ET: hla0636 ::::::::::::::::::::::::S:::E::::::D::VT:::DS:::::AH:QE:A:R: HQ3673A :T:::IV::::::::::::::::RE:::E:HTV:V:::PT:::S:::::G:H::P::::: Hbo1326 :S::::VH:::::::::::S::::S:::E::SI:D:::S::::T::::::::::P::E:: HVO_0199 :SD:::V:::::::::::::::::::::E::::::::::::::IS::::::::GG:AE:M consensus EE--HDADLGIANDGDADRIAVVTPDRGVLDENLFFAALYDYLLES---------GSGPA #oth 711132112.12.......2131.111.4.13.211124.13..2622111111143121 NP4676A VD::GP::I::::::::::V::::E:-:P::A:RL::V::::::AATD:::::::TPA:: VNG2276 D::::::::::::::::::V:A:::E:::::G:W:YVLA:::::::::::::::::T::: Hmu2728 RD::G::::::V::::::::G:::::::F::P::::::V::D::ATRGRGRPEGA::AGV rrnAC2568 S:::G::A:::I::::::::G:::::::Y::P::::::M::F:::D::::::::::T:DV Hut0764 ::::R:::I::::::::::L:::::E::F:N::::::::::::::Y:::::::::ND::: hla0636 TDPDS:V:M::::::::::::::::E:::::A:::Y::C::R:::N:::::::::D:::: HQ3673A K::::N::I::::::::::VGF::::::H::::::Y::::E:::K::::::::::E:::: Hbo1326 ::::::::::V::::::::V:F:::E::H:::::::::A:::::AE:::::::::E:::: HVO_0199 A:::::::::V:::::::::GIA:::::::::::::::V::::::::::::::::D:::: consensus VRTVSTTFLIDRIAEAHGEEVVETAVGFKWVAEAMAEHDALMGGEESGGFSIRGHVREKD #oth 1.1...1221.11.2..13413.12....1..42141....3.......12322.2.3.. NP4676A ::::::::::::::D:::TTA:::P::::::::T:::::::I::::::::T::D:I:L:: VNG2276 :::::::GHV:AV:A::DC::::VP:::::::A:VDD::::F:::::::YTM:::::Q:: Hmu2728 ::::::SSIV::V:A::::S:H:::::::H::A:::::::::::::::::GLTA:L:N:: rrnAC2568 ::::::SSIV::V:::::QN:H:V:::::::::::::::::F::::::::GLPD:L:N:: Hut0764 I:S:::::::::::D::::D:Y::P:::::::Q::::::::I:::::::::::D:::::: hla0636 :::::::::V:::::::::::Y::P::::::::::G:::::F::::::::TL:::::::: HQ3673A ::::::::::::::::::QS::::E:::::::N::R:::::V:::::::::::::::::: Hbo1326 I:::::::::::::::::Q::F::::::::::D::K:::::::::::::::::::::::: HVO_0199 I::::::::::::::::::::F::::::::::DG:R:::::::::::::::V:::::::: consensus GVLMGLLAAAATAEEPLDDRVDRLLDEHGDIHQDKISVDCPDDRKERVLDDLEDALPESV #oth ...31111.3333232313.22312221.2132314.22.1.22.331344.3352.122 NP4676A :::T:V:::M:A:DQ::T::LAT:V:TY:::K:ARR:LE:::AK:APTMAA:TSHP:::I VNG2276 :::::::::::AS:TA::::I:AIE:A::E:::::T:::::::::QA:::G:DA:::D:: Hmu2728 :::LA::::::AHDR:::E:::A::A:::E:::GR::::::::::::::GA::S:::D:: rrnAC2568 :::VA:A::::ER:::::A::::::::::E::::R:::::S:::::P::E:::T::::TL Hut0764 ::::A::::VM:::R:I:::I:DI:ET::EV:::RR:IE:::::::P:V:E::SQ::DT: hla0636 ::::A::::GTH:A::F:N::::::::::A:ASG:V:L:::::::VG::A::::HI:::: HQ3673A :::::::G::V::A::I::::N:::ET::::VAS:S::::::SE:A::INN:K:D:::TI Hbo1326 :::::::G:::::D::M:E:::::::A::::VA::::L::::SE::::I:E:D:E::DR: HVO_0199 :::::::::::::::DF:A:L::IEA:::::VA:::::A:::AE:A::I:::::V:::T: consensus AGRAVDKVNTLDGFKLLLADGSWLLVRPSGTEPKLRVYAEAGSDDRVDELLDAGRELVEP #oth 1.331251223..1.33.21.2.2.1......1.1.1...141523153..41.331131 NP4676A T:T:::EI:DA::S:F:::::A::::::::::A:::I::::AT::::EA::T::EA:IND VNG2276 ::V:::S::DT::::IV:::::::::::::::::M::::::::AA::AA:::::::::A: Hmu2728 :::S::S:S:V::::MT::::T:::::::::::::::::::T:RE::::::A::::I:T: rrnAC2568 ::V:::GI::V::::IR:E::T:V::::::::::::::::::::A::G::::::Q::::: Hut0764 ::V::ER::DA::::I:::::::::::::::::::::::::D:P::I:T:::::VD:::: hla0636 ::HG:A::V:::::::::EN:::::::::::::::::::::D::AA::N::AE:::I::: HQ3673A :::DIAD:VS::::::::D::::I::::::::::M:::::SS:QEH::T::Q:::::::: Hbo1326 :::DIE::V:::::::::E::::::A::::::::M::::::S:E:D:R:::E:::K::A: HVO_0199 :::DIA::V:::::::::D:::::::::::::::M::::::::E:A:ST::E:::::::: consensus LV------ #oth 22211111 NP4676A ARESAELD VNG2276 V::::::: Hmu2728 ::ASAE:: rrnAC2568 :::::::: Hut0764 :::::::: hla0636 :I:::::: HQ3673A :I:::::: Hbo1326 :I:::::: HVO_0199 ::::::::