|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3410 | Hmu0603 | VNG1083 | Hut1504 | rrnAC0837 | HVO_1470 | HQ1872A | hla1778 | NP2724A | Hbo0079 |
1543 | Hmu0603 | 3483 | 1163 | 1199 | 1325 | 1305 | 1242 | 1340 | 1227 | 1245 |
1829 | VNG1083 | 1163 | 3360 | 1514 | 1577 | 1539 | 1488 | 1559 | 1618 | 1608 |
2046 | Hut1504 | 1199 | 1514 | 3448 | 1943 | 1694 | 1618 | 1749 | 1733 | 1714 |
2344 | rrnAC0837 | 1325 | 1577 | 1943 | 3402 | 1978 | 1818 | 1928 | 2032 | 1960 |
2401 | HVO_1470 | 1305 | 1539 | 1694 | 1978 | 3392 | 1972 | 1997 | 2121 | 2162 |
2353 | HQ1872A | 1242 | 1488 | 1618 | 1818 | 1972 | 4345 | 2074 | 2055 | 2266 |
2551 | hla1778 | 1340 | 1559 | 1749 | 1928 | 1997 | 2074 | 3425 | 2196 | 2286 |
2620 | NP2724A | 1227 | 1618 | 1733 | 2032 | 2121 | 2055 | 2196 | 3418 | 2335 |
2667 | Hbo0079 | 1245 | 1608 | 1714 | 1960 | 2162 | 2266 | 2286 | 2335 | 3371 |
581 symbols consensus ----MEPLRSDET-----ETTLVSRSCRLDA--PSVRAALAAADRPRTLWAAPDEATVLG #oth 1222255434555643113542122243233242443442446531236.4312344232 Hmu0603 :MSRQDAAETEPASVG::AE:Y::A:R:I:V:S:-LA::G:VP::R:FC:LH:E:PDL:A VNG1083 :::::SS:AGET:A::::DGPV:AT:::VAD::V:T::F:::HAE:GFH::D::GLELS: Hut1504 ::::::SV:A:AVGTEHAGEI:AV:G:Q:::VD:ATLL:GDVEK::W:A::G:E:-:IAT rrnAC0837 :::::::::G:::TVG:::::V:A:G::::D:A:-::SV:VTDA:::FF:::GT:-SIAA HVO_1470 :::::::::T::M:::::G:H:::::V::S::::P:S:S::TMR:::A::T::::P::V: HQ1872A MKTSIQMME:RQ:RLD::DV::::::A:IPSLSS:::DIFDI:TS::VV:S::::T:::: hla1778 :::::KRA::SP-:::::AS:::::TTGI:::::AFA::FD:LPA:::T:N:::D:L::A NP2724A ::::::::::T:LCPD::::Q:::::R::S::P:DP:T::SM::A:::::::::::::V: Hbo0079 :::::--------::::::MH:::::VPVS:::::F::V:R:::A:::V:S:::K:::V: consensus SGAAATVTADGPDRFARVREAAEELFADGDV-HAGPEAARPRLFGGFAFHDGGT-DA-D- #oth 5.32222313142.1352145344..355123232244.1..21..11.14364143262 Hmu0603 V::T:A::V:S::::ETADDRLT:::GAV:GPD:-::I:A::AV:::::F::N:VP:DTQ VNG1083 A:T::S:::A:G::::A:::WSTG:::--:LT:D::D::::::::::S:F:TH::A::G: Hut1504 T:TV::I::TSG:::E:::RQ:AS::::R::SEIL:AF:::::::::S::S:::::RHAD rrnAC0837 R:S::::::::QS::DD::T:V:A::D:CS:PDSL:SI::::A:::::::N:TH:EG:ED HVO_1470 G:V:VA:E::::E:L:::::S:TS::DGA:::D:-:DV::::F:::L:::EEA::GR::: HQ1872A ::::::IV:T:S:::ES::D:::S::ST:::::::S:V::::::::::::AERA::S:K: hla1778 ::::::L::S::::::EI:AG:DD::DS:::::::T:::::::::::::::::C::G::: NP2724A ::::E:IR:::N:::RA:::::N::::T:::::::TLS:::::::::::::EHD:P::G: Hbo0079 :::::::::::::::D:I::::::::SS:::::::T::::::::::::::ADS:::G:S: consensus -PWRGFPDARFVLPRVQVTFA------------DDGTWLTVNAVGPDAAPEAVEARLARE #oth 23.73.1614.32.33123651111111111112341.1.25332322544232441463 Hmu0603 SH::D:D:GT:::::A:IVAG::::::::::::::A:::::TV--:EDEHSELSSQ:DGW VNG1083 :V:Q:::P::::::AI:L:SV::::::::::::G:E::::AIEA::::TVASAS:S::DA Hut1504 AD:T:::::Y:H::T:S:IER:::::::::::::GE::::TA:::::::TT:-::ARN:W rrnAC0837 S::D:::S:A:F::EI:::RR::::::::::::::DA:::TV:T::E::T::-::L:EEW HVO_1470 :::AD::A::::V:E:::A:D::::::::::::G:DA::::T:::A::D::::GD::DEV HQ1872A :::KQ::N:Q:IF::::I:WSTDTHTETDTADN:SHA:I:::::D:G:T:D:::Y::SQ: hla1778 :::GP::E::::::::::::::::::::::::::N::::::::::D::D:D:::::::T: NP2724A :::::::G::::::ET:L:Y:::::::::::::E:::::::HG::R:--V::::SA:EAA Hbo0079 :::ED::G::::F::::::Y:::::::::::::EN:::::::::::::NA::::E::::: consensus RDRLDSLDAPRPPGGPPGITARHRTTSRDAWREGVDAAVDRIRAGDLRKVVLAQALEADL #oth 3223542436755552.1245253324314.523.611241.4314.2.....221523. Hmu0603 A:::T--::GTHD:TE:EA::F:WSL::EE:ERT::DVIG::ESDG:D::::::E:TV:: VNG1083 ::AV:::P:MQAA:PR::V:DTTP:PG::::TA::QD:::::QS:P:::::::T::R::: Hut1504 ES::T--::HPTASR::::A::SQIPE:E::A:Q:G:::E::DR:::::::::G:QTVE: rrnAC0837 ::::VA-:SE:N::T::::SH:K::PTQ:G:::Q:A::TES:DR:E:Q::::::S:S:T: HVO_1470 :ET:E:::DA-::E::::VSN::::::VE::H:S:::::S:::::::Q:::::::::VE: HQ1872A IE:VKT:ESTNNSRS:::V:C:::R::::::NR::T::IN::S:DN:Q:::::::::VE: hla1778 ::::AG:ATTVDRPPR:::A:TR:::::E:::RS:E:::::::G:::Q:::::::::::: NP2724A A::F:GATT::::A:::::ER:E::::K:R:::S:T::I:::E::E::::::::::QTA: Hbo0079 :E:IE::PD:G:VSD:::VVH:R:::AK:D:NA::N:::E::S:::::::::::::A::: consensus AAPLSVPDVLDRLGETYPDCYRFLFEPDPG----------------------------AT #oth 34344432424..344..3.311542.542332211111111111111111111111144 Hmu0603 D::VP:AP::S::R::::N:TT:C:S:T::::::::::::::::::::::::::::::R: VNG1083 :E:ATPCAL:E::RQR::A:F:::VA:AD:::::::::::::::::::::::::::::GV Hut1504 :G:::::AA::::::::::::::G:A:AAAGS::::::::::::::::::::::::::G: rrnAC0837 D:E::::::MA::SK::::::::MLS::S:::::::::::::::::::::::::::::G: HVO_1470 DR:AAA::L:A:::R:::::H:::A::NG::::::::::::::::::::::::::::::S HQ1872A EETPVLG:IIT::::H::S::::II::V::TPVDQRIHTDVNAMTTVGSEDIHNTSQSPA hla1778 :::FPRAAT::::A:K::::H:YY::::A:G:::::::::::::::::::::::::::SA NP2724A SR:V:L::::T::AD:::::::::I:::D:G::::::::::::::::::::::::::::G Hbo0079 :SD:::::I:::::DS::::::::V::E:DADRPQ::::::::::::::::::::::::S consensus FFGATPERLVSLRGRTVETGALAGTTGRGETPAEDEWLAAELLDDEKNVHEHELVADTIR #oth .1.....1.2322113.2.4....121..11421.22..4213513.341.242.11111 Hmu0603 :::::::T::A:ADGH:Q:E::::::D::::A:::TD::DAM:G:::YQV:NRI:::::A VNG1083 :L:::::::A::::GR:::V::::SV:::DS::A:AR::DR:RESD:LR::QGV:V:::A Hut1504 :::::::::LRRD::R:Q:T::::SI:::::R:::::::E::TASP:DG:::A::VEA:: rrnAC0837 :::::::::::V:::::R:E::::S::::D::::::::::::::S::DR::QK::::A:: HVO_1470 :L:::::::::::::E:::::::::::::D:DD::::::N:::GS::DN:::::::E::: HQ1872A :::::::::::V:::::::::::::::::::T::::::::::AR::::::::::::E::: hla1778 ::::::::::A::::::::D:::::::::::::::::::R:::::A::::::::::::V: NP2724A ::::::::::GR:::::::::::::::::D::L::::::E::RS:A:::::::::::A:: Hbo0079 :::::::::::::::::::::::::::::::::::::::R::::::::::::::::E::: consensus DQLEPFAASVRTGDRRVRRLATVQHLWTPITATLAADEHVLSLVEALHPTPAVGGLPPDA #oth 32.52423615422151121212...411.3.21552411.11212.......1.1.144 Hmu0603 :A:R:V:DD:TVAEPSIK:ITNL:::HR:::::VPSETS::::A:R:::::::::S:RR: VNG1083 RR::GIGD-:AV:::D::Q:S:I:::E:::S:AVS::T:::DVI:T:::::::N::::AD Hut1504 A::DD::DH:E::E:T::Q:::::::Q:::E:::DEEV:::::::::::::::::::::D rrnAC0837 :::::::ST::I:::T::::::::::R:S:::E:DD:::::::::::::::::::::::: HVO_1470 E::A:LS:EI:V:::GI:K:::::::::::D:::ER::::::::D:::::::::::::E: HQ1872A E::S:Y:TAITSDS::::K:::::::::::::::EE:K:A::::::::::::::::::TT hla1778 E::::::::ISA:E::::::::::::H:::::E:N::R:::D:::::::::::::::::R NP2724A :::Q:Y:::::::E:G::::::::::E:::::E::::::::::::::::::::::::::K Hbo0079 :::A:::S::N::::C:K:::::::::::::::::TS:::::::::::::::::::::EK consensus ALATIRDTEPFDRGWYAAPVGWIDAAGDGTFAVAIRSAVAHDRAATLFAGVGIVADSDPD #oth .232.212.2.1.....1.1..2.11.2.3.2.11.1123533531.11.2.2.31.2.1 Hmu0603 :SDV:::V:::::::::S::::V:GD:::::V:G::AGLTW:ERLA:YG:A:::TG:::T VNG1083 :::::::::T:::::::::I:::::D:::::G:GL::G:VD:DSV:::::N:::G::T:: Hut1504 :::A:QES:A:::::::::I::F::::::E:::G::::L::::E::::::A::::::::: rrnAC0837 ::R:::E::A::::::::::::V::::N:::::G::::::TE:E::::::A::::::::: HVO_1470 ::DV::::::::::::::::::F::D:::S::::L:::IVEETL::::::::L::::::: HQ1872A :AE:::E::::::::::::::::::::Y:::V::L:::::::D::::::::::::::N:: hla1778 ::E::H:::::::::::::::::::::N:A::::::::::TP:R::::::::L::::::: NP2724A :::::::::::E::::::::::F::::N:S:::::::::::GE::::::::::::::::: Hbo0079 ::E::::::::::::::::::::::::Y:S::::L::::SR:DTT:::::::V:E::::: consensus REWDEVQLKYRPILDELE------------------------------------------ #oth 3.12.11111112..1.2443211111111111111111111111111111111111111 Hmu0603 T:YG::RSRFE::::A::VELP:::::::::::::::::::::::::::::::::::::: VNG1083 A::E::::::::V::::Q:::::::::::::::::::::::::::::::::::::::::: Hut1504 A::::I:::::::::A:R:::::::::::::::::::::::::::::::::::::::::: rrnAC0837 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1470 A:::::::::::::::::RDD::::::::::::::::::::::::::::::::::::::: HQ1872A S:::::::::::::::::SNDADDDTINQAQSEISTHTQGTVDDTMNESASTSISTPDTT hla1778 ::::::::::::::::::DGN::::::::::::::::::::::::::::::::::::::: NP2724A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0079 :::::::::::AL:::::R::::::::::::::::::::::::::::::::::::::::: consensus ----------------------------------------- #oth 11111111111111111111111111111111111111111 Hmu0603 ::::::::::::::::::::::::::::::::::::::::: VNG1083 ::::::::::::::::::::::::::::::::::::::::: Hut1504 ::::::::::::::::::::::::::::::::::::::::: rrnAC0837 ::::::::::::::::::::::::::::::::::::::::: HVO_1470 ::::::::::::::::::::::::::::::::::::::::: HQ1872A VPSESNSQSNTTMEPTSDADADADADVDADADTNTNIDDTE hla1778 ::::::::::::::::::::::::::::::::::::::::: NP2724A ::::::::::::::::::::::::::::::::::::::::: Hbo0079 :::::::::::::::::::::::::::::::::::::::::