|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2089 | hla0993 | rrnAC1956 | HQ2713A | HVO_2706 | Hbo2427 | VNG1452 | rrnAC0289 | Hmu1384 |
1389 | hla0993 | 2989 | 911 | 1134 | 1231 | 1253 | 1124 | 1021 | 1113 |
1242 | rrnAC1956 | 911 | 2092 | 945 | 1063 | 998 | 1036 | 1262 | 1119 |
1482 | HQ2713A | 1134 | 945 | 2049 | 1393 | 1483 | 1092 | 1174 | 1178 |
1571 | HVO_2706 | 1231 | 1063 | 1393 | 2071 | 1559 | 1202 | 1209 | 1240 |
1625 | Hbo2427 | 1253 | 998 | 1483 | 1559 | 2062 | 1257 | 1170 | 1250 |
1487 | VNG1452 | 1124 | 1036 | 1092 | 1202 | 1257 | 2127 | 1248 | 1293 |
1504 | rrnAC0289 | 1021 | 1262 | 1174 | 1209 | 1170 | 1248 | 2100 | 1397 |
1519 | Hmu1384 | 1113 | 1119 | 1178 | 1240 | 1250 | 1293 | 1397 | 2108 |
405 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 hla0993 MFRCSLLDHWRSICRVHFQSPRRTATAASHLPSRVAGGFAADCQRHFAPRGHRTTSDCKR rrnAC1956 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ2713A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2706 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2427 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG1452 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0289 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1384 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------MIDETV #oth 111111111111111111111111111111111111111111111111111111..11.2 hla0993 GLRSRPTRGLLAARRHAPPWTNMYDGSQSVDLIHALSVRQDPGTPLNWDDDSSS:::::: rrnAC1956 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::N::: HQ2713A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::I HVO_2706 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::I Hbo2427 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::D:I VNG1452 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::A rrnAC0289 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1384 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus EEIREMQTHSSSVVAVKAARALADLLDRDYPTVEEFERDLERNSGALRRANPSHASLHNA #oth 21.31.2.1.1.21....121.42.211134.22313.3111.221.2.1.1...2.311 hla0993 A:::A:R:::T:A:::::T:S:::::::E:V::D:::::::H:A:V:::S:::::A:::: rrnAC1956 RQ:E::E:Q:::IA:::::K::RE:T::ECH:::D:C:VV::::S::Q:::R:::P:YTT HQ2713A :::Q:::::::::::::::Q::T::::::HT:I:N::::::::V:::K:::::::::F:: HVO_2706 ::::::::::::::::::T::::E:TE:::A::::::::::::V:::K:::::::::Y:: Hbo2427 ::::::::::::::::::T:::TE:::::HA::::Y:::::::V:::K:::::::::Y:: VNG1452 ::::::R:::::::::::::::EA:::S:::::AAYV:A:::::T::::::::::::VTT rrnAC0289 :::S:::::::::::::::Q::R::T::E:::::DYL:S:D:::S:::::::::::::TT Hmu1384 :::S::::::::::::::::::SA:A::EF::T::YV:A:::::S:::::::::::::TT consensus QRRIVTRVSDAEADSVDEAKELTEEAIDRVVEDVETGKDRAAARAAETIEDGDTLLTHDY #oth 23513642511233224212331332133.1351252.53..342364242241211.12 hla0993 M:EVERSIVG-::T::EDG:QRL:DT:::::D:I::A:GE:::N:T:R::::::::V::: rrnAC1956 :Q::::DLK::DL:::SA:::RLL:T::E::TEI::S:::::E:::TL:D:::V:V::EN HQ2713A MQT:KIN:V:-RKSDL::::K:L::V:H::::::TE::S::::K::P:L:TDS:I::::: HVO_2706 LQDVLHS:QG-:::DL:::R:::LST::::::T:::::RH::QQ::A:::::Q:F::::: Hbo2427 MEGVL:::TG-::ST:::::::::S:VE:::::I:N::S::::N::K:FK::E:F::::: VNG1452 ::EV:S::R::DPA:IP::Q:V:AA:::D::AR:NM::HD:::AT::H:T::Q::::::: rrnAC0289 :H:::NT:::::P:D:AA:::::N::::D:IDS::SS::::::::VSE:A:D:V:::::F Hmu1384 ::A::E:::G:DL:::AD::AE::A::QA:::Q::A::E:::K:CGDRLDPTA::::::: consensus SSTVLEAIERAAADG---AHLTVYVTEARPRFLGRKTARALAGIDRVDPHLIVDGAAGHF #oth .2..212225.452211154243111.1..13...142.7114223212213..1.3.43 hla0993 :T:::::::N::R::::::::::::::::::T:::::::V::::A:::TRMV::S:M:YA rrnAC1956 ::::MATLMA:LD:::::KEFHL:AS:S::H::::R:::Q::DR:GA:VT::::::V::Y HQ2713A :::::::::::TSTK:::TS:K:::::::::Y::::A::R::ELMQ:E:::L::S:::S: HVO_2706 ::::M::V:L:V:::::::Q::A:::::::::::::F::E::A::D:E:::M::::S:M: Hbo2427 :::::::V:I::::::::N:M:T::::::::Y:::::::T:S::::IE::::::::::I: VNG1452 :::::::::L::Q::::::::D:F:::::::H:::::V::::QL:::::T:::::::::V rrnAC0289 :::::A::DD:IEA::::HSFE:::::S::::::::MT:H:SDR:G::VT::::S::::: Hmu1384 :A::I:S::::IETADGEVDM::::::::::Y::::L::SM::::G::VR::::S::::Y consensus LSECDRVLVGMDCIVDDTLYNRIGTFPIVAAAADLDVPVTVVGSAAKLVDGGFAFENEFR #oth 1422.2.32.12.223212...1..2.1221.23512...11.241.51333.5.2.22. hla0993 :RD::Q::L:IT:MTGG:Y::::::::L:VT:RE:G::::A:::D::RIEE-:R:::::: rrnAC1956 :::A:::F:::N:LI::VV::::::L:LA:T:NEM::::::::TSS:FIGS::T:R:T:: HQ2713A ::D::::V::::::::E:::::V:::::I:T::AV::::::::::::V:::S:V::::Y: HVO_2706 :PG::::II::::::EE::::::::::L::::NEVG::::::::G::V:::::R::::I: Hbo2427 :E:::::V:::::::E::::::V:::::::T::Q::I:::::::G::I::D::I::::I: VNG1452 :DD:::::L::::::A::Y:::V::Y::::::::AGT::::A:::::::AD::Q:T:D:: rrnAC0289 MP:V:::::::::::::::::::::Y::AT::::N::::::::A:::Y:::A::::::I: Hmu1384 :::::H::::::::::::::::V::Y::A:::::QG::::::::ES::I::::::::::: consensus SPSEVMREPVEGFEIENPAYDATPTRLLDTVITDDGVR-EF---- #oth 3521.31..3212522..2.....2512.411.121251322211 hla0993 DAV::::::::DVT::::S:::::IGM:::I:::::IV::-:::: rrnAC1956 QG:D::L::P:::D:G::G::::::S:::::V:E::IL:Q::::: HQ2713A ::A::SL::L:DIM::::::::::VS:I:Q::::N::E:S::::: HVO_2706 ::::::L:::::I:L:::::::::VD:I:E::::E::I::::::: Hbo2427 :TA::SL::::DVF:::::::::::E:V:E::::E::::T::::: VNG1452 DT:::I:::PA::TV::::::::::::::A:V:E::R:T::PLES rrnAC0289 PL:::L:::AD:::VA:::::::::H:::::V:::::H::Y:::: Hmu1384 :V:::::::A:::S:::::::::::::::N:V::ER:V::YDE::