|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 5144 | VNG2173 | hla0462 | HVO_0283 | Hbo1200 | HQ3065A | NP5144A | Hut2659 | rrnAC2756 | Hmu2832 |
3549 | VNG2173 | 4475 | 3291 | 3284 | 3388 | 3232 | 3282 | 3236 | 3281 | 3276 |
4176 | hla0462 | 3291 | 5174 | 3868 | 3932 | 3871 | 3856 | 3679 | 3393 | 3770 |
4195 | HVO_0283 | 3284 | 3868 | 5151 | 4118 | 3830 | 3725 | 3609 | 3254 | 3787 |
4446 | Hbo1200 | 3388 | 3932 | 4118 | 5184 | 4212 | 3954 | 3733 | 3385 | 3984 |
4258 | HQ3065A | 3232 | 3871 | 3830 | 4212 | 5164 | 3804 | 3682 | 3353 | 3849 |
4336 | NP5144A | 3282 | 3856 | 3725 | 3954 | 3804 | 5064 | 3854 | 3465 | 3883 |
4240 | Hut2659 | 3236 | 3679 | 3609 | 3733 | 3682 | 3854 | 5216 | 3583 | 4158 |
3804 | rrnAC2756 | 3281 | 3393 | 3254 | 3385 | 3353 | 3465 | 3583 | 4451 | 3787 |
4422 | Hmu2832 | 3276 | 3770 | 3787 | 3984 | 3849 | 3883 | 4158 | 3787 | 5249 |
704 symbols consensus VSQQVARVDTLFLHETGDDYAVVVRRDGERVFRGRLELKETSAGPRPARFRVKRGDEEDP #oth 213124423111212544225112311141324241122214111114222232345252 VNG2173 ------------------------------------------------------------ hla0462 ::::L:E:E::::::ARS::T::AT:::N:IL:::::::::::::::GK:::I:DG:DH: HVO_0283 ::K::T::::::::Q:::::L::A::::K::L::K::::::N:::::L::L:T:KG:DS: Hbo1200 ::K::G:I::::V:::N:::L:::Q::::::::AV:::Q::N::::::K::::::SN:E: HQ3065A M:R::S:::::::::R:E:F::::::::G:::Q:T::::Q::::::::K:::::::S:E: NP5144A M:K:::D:G:::::::DGE::::A::::::L::::::::::::::::G:::::D::DDV: Hut2659 :::::TQ::::::::D:E:FQ:::Q::::::LD::::V:::E:::::::L:I:::SQ::L rrnAC2756 ------------------------------------------------------------ Hmu2832 :::::::::::::::H::::R:::::::G:::H:V::::Q:D:::::R:L:I:::AS::L consensus RDPSQFVELARRAGRIRISEQTSKAGRDELREMLDGYQLEAKVVRTCRYCASNGRYSPIT #oth 241431122114151112121125531643521.11..13.23.....3..34.1.1.1. VNG2173 --------------------------------:::A:::A:::::::::::GR:::::L: hla0462 :Q:GE::D:::A:::::::::::PKN:KR:QA:::::::::MA:::::R::ND:::G::: HVO_0283 :::::::::::S:A:::::Q::P:D:::::K::::::::::LT:::::R::V:::::::: Hbo1200 :::::::::::::E:::::Q:::::R:::F:::::::::D:L:::::::::::::::::: HQ3065A Q:::S::DI::E:S:::::Q:::PPN:TA:S:L::::::D:L:::::::::::::::::: NP5144A :R:E:::::::::T:::::::::R:::A::EA:::::::D::Q::::::::G::::::L: Hut2659 :S:D:::::::::::::V:::::AR::RVV::L::A::::::::::::F:::A:K::::: rrnAC2756 --------------------------------:::A::V:::::::::L:::D::::::: Hmu2832 :S:D:::::::::S:::::::::GR::E:::A::K::::S::::::::::::S::::::: consensus SETAIEADDEHICPDCARRELERELAFS---GAITGAAQDRLEELLLEVQDLDRITNLLS #oth 311..3224.5..12..331.11.1325111.65113.23...1..4231..32142..3 VNG2173 A:::::::G:F::R:::VE::::::S:::::::VS:::::::::::FAE:::EKV:G::G hla0462 :DG:::HN::L::R:::::::::::SYK::::EF::::EE::::::Y:SG:::::V:::Q HVO_0283 DD:::K:EH::::R:::VQ:::G::S:A::::GL:Q:::E::::::Y:TG::T::::::Q Hbo1200 ED:::K::N:Y::::::K:::::::D:::GT::M:Q:::E:::S::::T:::G::S:::K HQ3065A D::::AT:R:Y::::::K:::::::D::TGT:RL:::::Q::::::I:T:::::::D::: NP5144A ::::::::N::::::::K::::::ANYR::::LRS:-:R:::::::V::G::ESVI:::: Hut2659 :::::D::G:D:::S::IT:::::::YH::::DV::T:R::::::::D::::E::V:::: rrnAC2756 ::::::T:::T:::E:::QQ:D:::::K::::S:S:D:R:::::::::::::::V::::: Hmu2832 :::::K::::::::::::E::D::::LN::::G:::D::A:::::::D:::::::E:::: consensus GELDPDLTKFDEISATTDDIDLVRTDTLDLHPGLQSHLEGRFDTLLPVQSLAVENGLLDG #oth .3...1..11.11..1111121.4143.11..432433262.11.......1131.2311 VNG2173 :::::::::Y::V::::::V:P:AVSE:::::DV:GLF:D::EE:::::::::::::VE: hla0462 :G:::::::Y::V::NV:::SP:::ED:::::D:SA::Q:::EE:::::::S:R:::::: HVO_0283 :::::::::::T:::::E:VE::E:N::::::N:K:M:TE::::::::::::ID:::::: Hbo1200 :G:::::::::TV::::::::::S:S::::::A:::MV:N::E::::::::::::::F:E HQ3065A :G::::::R::TV:::::EV:::E:T::::::K::EL::A:::::::::::::N:::F:: NP5144A :D:::E:::::::::::::::::S:::::V::K::::IQ--::E::::::::::::::E: Hut2659 :::::E::::::::::VE:::::P::S:S::::M:QK:::Q::E::::::::::::VT:: rrnAC2756 :Q::::::::::::::V:EV:P::V:S::::::M:E:::S::::::::::::::H:ATE: Hmu2832 ::::::::::::::::V::::::PV:S::::::I:Q::::::::::::::::::::AT:: consensus RDQLVVSATATGKTLVGELAGIDRVLNGDGKMLFLVPLVALANQKHEDFQERYGDLLDVT #oth 4..1...........1..2..22.31333.11.............112.422..144211 VNG2173 D::M::::::::::::::I::LH:LQS:N::L::::::::::::::::::DE::H:AN:: hla0462 T:::::::::::::::::::::::A:K::::L:::::::::::::::::KD::::R:N:S HVO_0283 D:::::::::::::::::::::N:M::D:::::::::::::::::::::K::::H:GK:: Hbo1200 :::::::::::::::::::::VN:A::::::::::::::::::::::::E:::::H:N:: HQ3065A H::::::::::::::I:::::VN:::TEG::L:::::::::::::::::T::::::I::: NP5144A ::::::::::::::::::::::::A:S::::L:::::::::::::::::E:D:::I::I: Hut2659 Q::::::::::::::I::M:::::::::K::::::::::::::::YQ:::AE:::IA::S rrnAC2756 :::::::::::::::I::M::::::::NK:T::::::::::::::Y:Q::D::::MV::S Hmu2832 :::::::::::::::I::M::L:::::NK::::::::::::::::Y:S:A:::::MV::S consensus IRVGASRIRDDGNRFDPNADVIVGTYEGIDHALRTGKDLGDIGTVVIDEVHTLKEGERGH #oth 1...1..1311122...5..1.............112...111.1......1.1121... VNG2173 ::::S:::::::HA:::A::I:::::::::::::::R::::::::::::::::::DD::: hla0462 ::::S::VN::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0283 ::::::::N::::::::::::::::::::::::::::::::::::::::::::::E:::: Hbo1200 ::::::::N:::::::::::I:::::::::::::::::::::A::::::::::::::::: HQ3065A ::::::::A::T:::::D::I::::::::::::::D::::::::I::::::::::::::: NP5144A L::::::::::::::::G:::::::::::::::::::::::::::::::::N:GAD:::: Hut2659 L:::S::::G::GG:::S::I:::::::::::::V:H::::::::::::::::G:::::: rrnAC2756 L:::::::A:E:G::::E::::::::::::::::::::::TV:::::::::::G:D:::: Hmu2832 L:::S:::DG:::::::::::::::::::::::::::::::::::::::::::G:::::: consensus RLDGLISRLKYYCE------TRANRREGYDG-----------TQWIYLSATVGNPGSLAE #oth ....111...1.1221211143667472331212222211121.21........136..3 VNG2173 ::::::::::::::::::::Q:REE:A:::::::::::::::A::V::::::::::E::G hla0462 ::::::::::::S:::::::N:METH:::G::::::::::::::FV:::::::::EW::: HVO_0283 ::::M:A:::H:::::::::S::D:::::G::::::::::::A::::::::::::KW::Q Hbo1200 ::::M:::::H:::::::::::EKQ:NS::::::::::::::A::V:::::::::EM::Q HQ3065A :::::::::::::A::::::::::H:R:::::::::::::::A:S::::::::::ET::: NP5144A :::::V::::H::R:::::::NQCD------::::::::::::::V::::::::A::::: Hut2659 ::::::::::::::SGGKTAA:S::SG:RG:SASSSQSG::D:::::::::::::::::D rrnAC2756 ::::::::::::::::::::SGGAPDS:D--:::::::::::::::::::::::::Q::D Hmu2832 ::::::::::::::QGE::::VEQS:K:RT:DAREQNVGLDG::::::::::::ASD::: consensus KLRATLIEFEERPVPIERHVTFADGREKPDIENKLVRRAFDTKSSKGYRGQTIIFTNSRR #oth 4.313.1.1.1..1..1.......23..531322.1111..31..1.......1...... VNG2173 ::::N:V::::::::::::::::::A:::::::T::::E::QE::M:::::::::::::: hla0462 ::::::::Y:::::::::::::::S:::AQ:AD:::K:E::::::::::::::::::::: HVO_0283 N:::N:V:Y:D::::::::::::::Q:::R:::R:::Q:::S:::::::::::::::::: Hbo1200 :::::::::::::::::::::::::::::::I::::::E::::::::::::::V:::::: HQ3065A R:QT:::::::::I::D:::::::::::V::T::::::E::::::::::::::V:::::: NP5144A S:G:Q:::::::::::::::::::D:::L:::D:::K::::::::::::::::V:::::: Hut2659 S:S:K:::::::::::::::::::DY::V::::::AK::::::::::::::::::::::: rrnAC2756 Q:::::::::::::::::::::::::::IET:K:::K::::N:::::::::::::::::: Hmu2832 ::::N:V::::::::::::::::::Q::TR:::::::::::::::::::::::::::::: consensus RCHEISRKLEYDSAPYHAGLDYGRRKRVERQFGNQDLAAVVTTAALAAGVDFPASQVIFD #oth ..11.1.214.3111......133.33..23.11.1.1................1..1.. VNG2173 ::N::::::D:P:R:::::::::E::S::::::D::::::::::::::::::::N::::: hla0462 :::::::::R::::::::::::K:::K::::::::::S:::::::::::::::::::::: HVO_0283 :::::A::MD:NA:A::::::::Q::::::::A::::::::::::::::::::::::::: Hbo1200 :::::A::::::A:::::::::::::K:::M::::::::::::::::::::::::::V:: HQ3065A :::::::::S:S::::::::::NQ::::::D::::::::::::::::::::::::::V:: NP5144A :::::::Q:A::::A::::::::E:::::::::::::::::::::::::::::::::::: Hut2659 :::::::R:::S:::::::::NK::GE::SL:AD:E:::::::::::::::::::::::: rrnAC2756 :::Q:::::::S:::::::::NRK:Q::::::AD:::::::::::::::::::::::::: Hmu2832 :::::::::::::::::::::NK::H:::Q::AD:::::::::::::::::::::::V:: consensus SLAMGIEWLSVQEFSQMLGRAGRPDYHDKGTVYLLVEPDGSYHNSMEMTEDEVAFKLLKG #oth 1........1....1.............2.3..2.....22..111121.1.1..1.... VNG2173 T:::::::::::::E:::::::::::::R:K::V:::::A:::S:::G::E:I::T:::: hla0462 ::::::::::::::::::::::::::::R:R:::::::::V:::::DR:::::::T:::: HVO_0283 T:::::::::::::::::::::::::::::V::::::::A::::T::::::::::::::: Hbo1200 T:::::::::::::E::::::::::::::::::::::::C:::::::::::::::::::: HQ3065A ::::::::::::::E:::::::::::::E:::::::::::A:::::DR:::::::T:::: NP5144A ::::::::::::::E:::::::::::::::::::::::::A::::::::::::::::::: Hut2659 :::::::::T::::::::::::::::::::::::::::::V::::Q:::::::::::::: rrnAC2756 :::::::::T:::::::::::::::::::::::M:::::C:::::::::::::::::::: Hmu2832 :::::::::::::::::::::::::::::::::::::::C::::::::S::::::::::: consensus EMEPVITRYDESAAVEETLANVVVAGKAAKRLNDRMIGEVPTKHAVGKLLEYEFIDGLEP #oth 1..3.514..141.2......12.1.33..2..2..2.12..11.2....212....13. VNG2173 D::N:V:H:::D::::::::::T:G:T:::::::::V:DI:::::L:::::::::::::: hla0462 :::D:A:H:::T:::::::::::::::K:::::::::::::::::::::::WK::::FS: HVO_0283 :::E:R:V::Q:S::::::::I::::TK::A::N::L::L::T::::::::WG:::::D: Hbo1200 :::D:M:V::::::A:::::::I::::K::::::::::D::::::::::::W:::::FD: HQ3065A :::D:M:I::::::A::::::::::::Y::Q::E:::::::::R:::::::W::::::T: NP5144A :::::V:::::T::I::::::::::::::::::E::V:D:::::::::::K::::::::: Hut2659 :::::TN::::::::::::::I::G:S:::::::::L::::::::I:::::::::::::: rrnAC2756 :::::::::::G::::::::::T::::Q::::::::V::::::::L::::::::::::S: Hmu2832 D::::::E:::A::::::::::T:::DQ:::::::::::::::::L::::Q::::::::: consensus TPLGRAVTRHFLAPDEAFAILDGIRKGLDPYEIVAEMELRDEE- #oth .11.211122..3.241.62..21.2264.2411.23.132334 VNG2173 :DR:::::T:::D::S::R::::V:::HA:GR:I:TL:::EDDQ hla0462 :::::GI:::::::::::FM::A::::T:::Q:::DL::::D:E HVO_0283 ::::L::::Q::S:K::::::::::::SS::K:::DL::DE:GR Hbo1200 ::::Q::C::::::KD::R::::::Q::S:::L::::::AEDDL HQ3065A :::::::C::::S:QD::ML::Q::NNV:::::I:T:::E:N:: NP5144A ::::Q:I:E:::K:::::VL::A::::TP:::L:::I:::G::: Hut2659 ::::::::::::S::R::LL:::::::R::FD::::V:FA:::L rrnAC2756 ::::::::::::::::S:QL:::::::QH::::::D::::::H: Hmu2832 :::::::::F:::::Q::::::::::D:H::D:::::::::R::