|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1891 | Hut0576 | HQ2927A | hla1384 | HVO_2763 | NP4346A | VNG1503 | Hbo2495 | rrnAC0963 | Hmu1749 |
1183 | Hut0576 | 1913 | 981 | 990 | 1035 | 1012 | 1020 | 963 | 1064 | 1088 |
1331 | HQ2927A | 981 | 2149 | 1113 | 1114 | 1128 | 1062 | 1254 | 1044 | 1090 |
1331 | hla1384 | 990 | 1113 | 2240 | 1126 | 1143 | 1211 | 1249 | 1080 | 1084 |
1326 | HVO_2763 | 1035 | 1114 | 1126 | 1868 | 1121 | 1242 | 1247 | 1066 | 1121 |
1425 | NP4346A | 1012 | 1128 | 1143 | 1121 | 1914 | 1267 | 1253 | 1157 | 1143 |
1442 | VNG1503 | 1020 | 1062 | 1211 | 1242 | 1267 | 1877 | 1257 | 1171 | 1181 |
1504 | Hbo2495 | 963 | 1254 | 1249 | 1247 | 1253 | 1257 | 1953 | 1236 | 1245 |
1387 | rrnAC0963 | 1064 | 1044 | 1080 | 1066 | 1157 | 1171 | 1236 | 1928 | 1417 |
1430 | Hmu1749 | 1088 | 1090 | 1084 | 1121 | 1143 | 1181 | 1245 | 1417 | 1963 |
314 symbols consensus MRLTFLGTGSAMPTGDRAQTGLLLEDDG---RRLLVDCGSGVLHRLARTDVGYEGVDTVL #oth .21.1..1.11..335.4.2.2.1243412233..1.......44.25.13..12322.. Hut0576 :Q:::::::::::::N:H:::::::AE::::N:::I:::::::DA::A:ER::IDL:A:: HQ2927A ::::::::::P::VA::::::S::TT:N:ND:A::::::::::Q:::A:E::::DISS:: hla1384 :E::V::S:::::VP::V:A:Y::D:GD::::S::::::::::Q:::G:ET:::::S::: HVO_2763 ::V::::::::::VTG:::::::::S:::::NA::::::::::A:::E:E::::::SS:: NP4346A ::V::::::A:::S:::F::::::::S:GTASP:::::::::::G:::::G:::APG::: VNG1503 :Q:::::::::::::Q:M:::::V::GD:::S::::::::::::T::::::::::::::: Hbo2495 ::V::::::::::LP::V:::::V:S:E::::S::::::::::N::TN:::::::IG::: rrnAC0963 :::::::::::::::S:M:S:Y:::R:::::N::::::::::::S::Q::T::::::::: Hmu1749 :::::::::::::::T:F:S::::::GS:::D::::::::::::A:E::::::::::::: consensus LTHHHLDHVSDLLPLMKARWLAGETDLEIVGPAGTKDLIDDLLDVHDYLQGRVDLTIREV #oth .1...1...21.2212.......234.221..3..54.232.133.3.132222343212 Hut0576 :::::::::A:::::V:::::::AS::C:A::P::R::L:E:::::T::RKH::PDATDI HQ2927A :::::I:::T:::::::::::::::Y::::::::::R::::::EI:E::SDQIE:R:::: hla1384 :::::::::AA:::::::::::::EH::V:::::::S:L:G:::::E::D::I::AV::: HVO_2763 ::::::::::::MA:V:::::::ADS::::::E::EE:VEG:F::::::R::L:IQ:::: NP4346A :::::::::A:::::L::::::::::::L::::::AA::E:::S::E::::::AI:V::L VNG1503 :S:::::::::::A:L::::::::ET:TV::::::DA:VT:::G::::::::::V:L::: Hbo2495 :::::::::::::A:L:::::::::H::V:::T:::R:L:G:::::::::D::E:R:::: rrnAC0963 ::::::::::::DV:::::::::::::T:A::P::S::VR:::ET:::M:D:L:::L:DL Hmu1749 ::::::::::::DVF::::::::D:::T:A::P::R:::EG:::L:G:MR::L::::D:: consensus G-AGPFTVAGFDVEARETRHSMDGLAYRFSGDG------------------DADLVFSGD #oth 4243333311122426213..23211..3564553311111111111222252431311. Hut0576 E:P:AT:L:::::V::AVQ:::A:FG::V:PA:AD::::::::::::::::APTV:V::: HQ2927A ::PTE:::TD::I:::R:E::V::::::ITEPTQEQDISADAQSEESDADES:TV::::: hla1384 SA:R::AA:::::T::::::::::F:::::PPSADFD::::::::::PA::NGP:TL::: HVO_2763 ::PTE:GI:::::MGF:V::::PT::::::NERG:::::::::::::::::E::F::::: NP4346A S:::SA::::Y::T:V::D::::::::::ET:-::::::::::::::::::::IFT:::: VNG1503 D:V:SVG::::::T:I::E:::P::::::G::-:::::::::::::::::::G:::::A: Hbo2495 T:::S:E::::EI::T:::::K:C:::::H::SDAGD::::::::::DDRSGG:F::::: rrnAC0963 D:G:::EL:::SGDTC::::::QCF:::L:V:D::::::::::::::::::GPAITLGA: Hmu1749 :VDE:::L::::I::M::::::QCF::::QAG:E:::::::::::::::::EPA::Y::: consensus TEAFDGLAAFADGAAVLVHDCSFPDDVDVSNHPTPSQLGEAL--AGADIGRVYLTHLYPH #oth 1112643352.11131.1.......211112.11.331133.33225411311.1..1.. Hut0576 :R::PAFLST::::E::::::::::::ETDT:A::GS:::::AA:E:S::T::::::::: HQ2927A :::TNRI:RL:::::::::::::::G::::G:::::::ANV:::N:ITV::::::::F:: hla1384 ::::A:M:S::::SDL:::::::::GT::::::N:T::::S:::::T::DTLL:S::::: HVO_2763 ::::SA:GD:::::S::A:::::::::::::::::::V::::::::R::DS::::::::: NP4346A ::PI:EI::L:E:S:::A:::::::G:::D::::::R:::T:::S:Y::::::::::::: VNG1503 ::::::MG::::::S::::::::::E:::::::::T:::AS:::::V:VDDL:::::::: Hbo2495 S:::E:::N::::::::A:::::::E:::::::::A::::::::::Y::::::::::::: rrnAC0963 S:::TD:IE::::S:::::::::::::::::::::TT:::T:RD:D:EV::::::::::: Hmu1749 S:::TE:IE:::R::::::::::::E:::::::::A:::TV:DR:E:AV::::::::::: consensus TEGRHEEMLASIADA-YDGDVRFARDGLTVEI---------------------------- #oth 131522315321636111.2.42.4.1.51423443322122212222221111111111 Hut0576 :D::::D:I::VHEH::A:A:AV:S:::C::V:::::::::::::::::::::::::::: HQ2927A :::N::T:RER:QKK::::E::::::::::T:DVGGDGDGSKNADDTTTE:::::::::: hla1384 :G::ER::AQ:VR::GF::::EV:S:::R:A:AERSGSAGDGSAAGAGEANEADEADEAD HVO_2763 ADRVTDDLR::VSEQ:F::E::V:E:::V::L:::::::::::::::::::::::::::: NP4346A :D:H::::V:AVE:C:F:::::I:N:::::S:SGV::::::::::::::::::::::::: VNG1503 :N:E:DA:T:::HE:GF::E:HI:::::G::L:::::::::::::::::::::::::::: Hbo2495 :::K:::::Q::G:R:::::::::::::RID::::::::::::::::::::::::::::: rrnAC0963 :::::::::E::::S::::::Q::E:S::ITVS::::::::::::::::::::::::::: Hmu1749 :::::::::D:::AS:::::::::A:::S:T:DPTES::::::::::::::::::::::: consensus -------------- #oth 11111111111111 Hut0576 :::::::::::::: HQ2927A :::::::::::::: hla1384 ETDEADEAAEADGT HVO_2763 :::::::::::::: NP4346A :::::::::::::: VNG1503 :::::::::::::: Hbo2495 :::::::::::::: rrnAC0963 :::::::::::::: Hmu1749 ::::::::::::::