|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2150 | Hut2933 | NP2250A | VNG2060 | HQ3105A | hla0742 | HVO_1905 | Hbo1784 | Hmu3128 | rrnAC2820 |
1560 | Hut2933 | 2254 | 1441 | 1316 | 1344 | 1422 | 1393 | 1415 | 1328 | 1408 |
1686 | NP2250A | 1441 | 2150 | 1422 | 1419 | 1470 | 1512 | 1468 | 1432 | 1432 |
1656 | VNG2060 | 1316 | 1422 | 2110 | 1413 | 1505 | 1463 | 1525 | 1379 | 1301 |
1666 | HQ3105A | 1344 | 1419 | 1413 | 2171 | 1562 | 1493 | 1589 | 1286 | 1348 |
1790 | hla0742 | 1422 | 1470 | 1505 | 1562 | 2157 | 1652 | 1642 | 1385 | 1401 |
1777 | HVO_1905 | 1393 | 1512 | 1463 | 1493 | 1652 | 2119 | 1701 | 1398 | 1383 |
1807 | Hbo1784 | 1415 | 1468 | 1525 | 1589 | 1642 | 1701 | 2125 | 1434 | 1415 |
1623 | Hmu3128 | 1328 | 1432 | 1379 | 1286 | 1385 | 1398 | 1434 | 2153 | 1481 |
1577 | rrnAC2820 | 1408 | 1432 | 1301 | 1348 | 1401 | 1383 | 1415 | 1481 | 2272 |
299 symbols consensus MRVTLLGTGDTTGTPTVGCDCDTCEAARER------------------GVERTRFSVHVE #oth .4..............12.3.31.44..31122112221211222221.11.1....114 Hut2933 :E:::::::::::::::::G::V::Q::DPDDALREQLRDRGVEVGDR:::::::::::R NP2250A :E::::::::::::::PS:K:E::QR::::::::::::::::::::::::::S::::::H VNG2060 :K::::::::::::::P::::A::Q::::::::::::::::::::::::::::::::::A HQ3105A :L:::::::::::::::::::N:::H::Q::::::::::::::::::::I::::::::I: hla0742 ::::::::::::::::::::::::A:::::::::::::::::::::::::S:S::::::A HVO_1905 :::::::::::::::::::::E::L::::::::::::::::::::::::I:::::::::Q Hbo1784 :::::::::::::::::::E::::RE::A::::::::::::::::::::::::::::::: Hmu3128 :Q:::::::::::::::::::A:::R::D::::::::::::::::::::::::::::::: rrnAC2820 :E:::::::::::::::Q:::::::R::DPDEELRANVRERGIDPTG:::::S::::A:: consensus NERTGESLLIDFSPDFRQQFLRED-VPLPDAAVITHIHFDHLDGLGNAYRLFDDLPVHAA #oth 23332121.1.2.....4...4531122..12211.1....1.....2..14232112.1 Hut2933 ::::D:T::::A:::::T:::::::LDA::::::S:V::::::::::F:::TR:M::Y:: NP2250A :D:::::::V:A:::::S:::SN:::D::::I::S::::::::::::::::LE:V::F:: VNG2060 D:AS:DA::::::::::A::::T:ALS::::G:V::V::::::::::::::::::::Y:: HQ3105A :P:RN::I:::::::::::::QRN::SF:::GI::::::::::::::::::C::::I::: hla0742 :::::::::V:::::::S:::DN::::::::GIV:::::::::::::V:::V:G:::::P HVO_1905 :::::::::V:::::::H:::TQ:::::::E:LV:::::::::::::V:::L:::S:::: Hbo1784 :D:::::::::::::::::::THE:::::::GL:::V::::I::::::::V::::::::: Hmu3128 R-VN:D:::::::::::::::::S:::::::::V::V::::::::::V:::V:S:::Y:: rrnAC2820 :DT::::::V:L:::::H:::::S::::::::I::::::::::::::::::::E:::::: consensus DETDPATGESVAETVRSKYDYL-DRISVRARTPFEPFEACGFEVTLVPVDHPPLLCYGLV #oth 411..4.221.132124112..1.51414433.234.341.11121...3....31..14 Hut2933 G:V:::::Q:::QS::ER::::::V:D:K::D:::S:RVA:LD:::::::::::S::::: NP2250A ::V::::::::::::GD:::::::A:T:EP:S::::::T::::::::::E::::V::::H VNG2060 TD:::T:::::::::AG:::::::S:AL:GVA:RRS:A:A::D:::::::::::::::V: HQ3105A N::::Q:T:T:::::AR::S::::QVT:NPHS:::V::I::L:IQ:::::::::Y:::V: hla0742 S::::::D::::::I:::::::E:::G:HS:D::D:::S:::::RF::::::::::::V: HVO_1905 ::V::V::::::DAI:::F:::::::::ED:::::S:R:::LD::F:::V::::V:::VA Hbo1784 :::::K::Q::::::A::F:::::::::::Q::::T:RT::LD::::::E:::::::::T Hmu3128 :::::Q::T::VG:I:DR:H:::::::::G::::QR:::A:::::::::V::::VS:::R rrnAC2820 :::::V:D:::::A:::R::::::TV::H:Q::L:::TVA:::::::::T:::::::::R consensus IEDPETGAKLSLSGDTSYAIPEASRDVLRDPDLLLADGIVPASLCEHHPAGGDHHDDDGV #oth 112242113.121..13.3113412211321..22111.11145142..3..415242.2 Hut2933 V:::::::::::::::::EV:Q::::A:AGA::::V:::L::DR:DT:::::S::::E:: NP2250A ::::::::T:A::::SN:::DD:::::::N:::FF:::::::AY::Y:::::::A:A::T VNG2060 V:--RA::::AV::::T:::::::::AM::::::V:::::::H:TH:::K::R:P:A::: HQ3105A ::::V:DT::::::::::GV:SE:Q:A:SN:::F:::A:::::M:::::L::K::NK::: hla0742 ::::::::::::T:::::DV::R:::A:A:A::::::A:::::::D:::I::R:EGP::: HVO_1905 ::::::::::::::::T:::::::::::::::::::EA:::::V::Y::I:::DY:E::: Hbo1784 :::S::::::::::::::G:::D::S::S:::::::EA:::::::Q:::L::K:F::E:: Hmu3128 VD::DS::S:AI::::::::D:NA:E:::GA::A:VE:::H:D::S::::::::Y::A:R rrnAC2820 ::E:Q:::V::I::::C:DV:DR:KS::TGA::A:VE:::HPEA::Y::K::T::NE::: consensus PRTFGTKHMTREGARALADDLDADRTRLVHTAHYYPADEAFEDPLAVDGERFEL----- #oth 21.1.1....32..421222131242.3..32.13.213..322312..1425.11111 Hut2933 :M:Y:S::::I:::QR:SEE:::GEL:I::LS::L:VET::DV:::::::::V:::::: NP2250A Y:::::::::V::::R::::::::DY::::LS::I::::::D:DM:::::::::::::: VNG2060 ::::::::::::::L::G:::::::::V::A:::::VE:::A:EI:::::TIR:::::: HQ3105A ::::::::::::::CD::EA::::K::F:::G::::::::::::::I:::EYR:::::: hla0742 :::::S::::::::L::::E::::::::::L::F::P:::::E:::::::VY::::::: HVO_1905 A:::::::::::::I::GEE:NT:E:::::V:::::::::::E:::::::VYD:::::: Hbo1784 ::::::::::::::L::::::N:EQ:::::::::::VE::::E:::::::VYK:::::: Hmu3128 ::::::::::LT:::::::::A:::Y:I:::::FV:PEQ::R:DV::::Q::::AGAKR rrnAC2820 ::::::::::LP:::DF:A:IE::DY:I::::::V:::R::A:DIGL:::Q:M::::::