|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2142 | HQ2302A | rrnAC0771 | Hmu0952 | NP1906A | VNG0681 | hla0823 | HVO_1444 | Hbo0110 |
1632 | HQ2302A | 2146 | 1396 | 1388 | 1542 | 1438 | 1472 | 1505 | 1523 |
1667 | rrnAC0771 | 1396 | 2116 | 1560 | 1494 | 1484 | 1479 | 1532 | 1534 |
1695 | Hmu0952 | 1388 | 1560 | 2113 | 1522 | 1513 | 1520 | 1545 | 1577 |
1716 | NP1906A | 1542 | 1494 | 1522 | 2126 | 1612 | 1555 | 1612 | 1579 |
1756 | VNG0681 | 1438 | 1484 | 1513 | 1612 | 2129 | 1602 | 1614 | 1669 |
1807 | hla0823 | 1472 | 1479 | 1520 | 1555 | 1602 | 2119 | 1592 | 1661 |
1832 | HVO_1444 | 1505 | 1532 | 1545 | 1612 | 1614 | 1592 | 2140 | 1740 |
1866 | Hbo0110 | 1523 | 1534 | 1577 | 1579 | 1669 | 1661 | 1740 | 2149 |
288 symbols consensus --MRDLEDIDTVGVVGAGTMGNGIAQVAATAGYDVVMRDIEQEYVERGLDAIDDSLDRLV #oth 1234425333211........2.....1.21..3..1..33622.34.133.31113131 HQ2302A :MT::I:SVERI:::::::::S:::::T:A::::::L:::KTKF::D::V::A:R:::D: rrnAC0771 ::-MH::KV::::::::::::::::::::::::N:::::MTD:L:AA:FEE:QS:FET:: Hmu0952 :::S:IGE:Q::A::::::::S::::::::H::::::::VAEDL:TE:FE::::::S::: NP1906A :::LTTDSL:R::::::::::S:::::::A:::::::::::::::DS:FET:A:::::K: VNG0681 ::::S:A:TE:I:::::::::A:::::::::::T:::::::::::DA:F:S:ES::::F: hla0823 ::::E:S::GV::::::::::::::::::::::E:::::::S::::::::S:::::A::D HVO_1444 :::Y:T:::::::::::::::::::::::M:::::::::L:P:::::::S::::::S:F: Hbo0110 MDI:E:P:VE:::::::::::::::::::M::::::::::KM:F::::::S:E:::S:F: consensus EKDRLTESEADAARDRITGTTDLDDLADADLVVEAAVEDMDVKRDIFADLDEVTDEDVVL #oth 342432261332152.13...2122.2311111..11.1311.211.3...3435412.. HQ2302A :AE:RS:::TAMIQ:::::::A::::TTC::I:::::::::I:Q:::S::::M:NN:T:: rrnAC0771 AR:TV::Q::E::TA::::::EM::::::::::::VT::::I:QSV:E:::A:CGP:T:: Hmu0952 AN:T:::::ST:::E::::::::::::::::::::V:::VE:::SV:S:::::CRSG::: NP1906A KSGDY::K::E:I::::E:::A:G::::CG::I::::::I:::K:V:::::GLV-D:A:: VNG0681 SN:D:S:AD:::IV:::::::::AE:::C:V:I:::::::EI:Q:::R:::DALP::::: hla0823 ::G::D:-DPA:I::::E::::::A::A::V:::::::NL:::K:::::::G:::D:::: HVO_1444 S:EK::GD:::::KA:VA:::E:A::G:C:::::::::N::::::::::::DIVP:G::: Hbo0110 :::Q:SQT:::D:L:::R:::E:A:::V:::::::::::::::::::::::::::::::: consensus ATNTSTLSITTIASATDRPERVVGLHFMNPVPIMKGVEVVVGEKTADDVVAFAHEFAEDL #oth .1....1...1..12.22125.2.2.......2.2...2.2..1.345214212312341 HQ2302A ::::::::::S:::I:EY:D::I:I:::::::V:D:::L:A::R:::::LS::QS:INI: rrnAC0771 :S::::::::::::V:E:::Q:L:::::::::V:::::L::::::S:ET:TLGR:::H:I Hmu0952 ::::::I:::::::::T:::H:::::::::::L:::::L::::R::EAT:EA:::::AS: NP1906A ::::::::::::::::TS::::::::::::::V:::::I::::::RPGI:D::::::AE: VNG0681 ::::::::::::::V:::AS::::::::::::::T::::::::::DA:::::::AL:::: hla0823 ::::::::::::::::::ASD:I:::::::::::D::::::::R:::P::D:::A::::: HVO_1444 :::::::::::::A::E:::L:::::::::::::::::::R::::D::::::::D:S:A: Hbo0110 :::::::::::::A::::::N:::V:::::::L::::::::::::DSK::EL::::S:E: consensus GKETWESDDKPGFVTNRILMPWINEGIRAYDEGVASKEDIDRGMTLGTNVPMGPLELADH #oth 1..1.11.......1..1....1...1..1..1..212...3.11....1.....1.... HQ2302A :::A:V::::::::::::::::::::::::::D::T:::::K:::::::A:::::T:::: rrnAC0771 ::::::A:::::::V::V::::::::V::::::::D:A:::::L:::::::::::::::: Hmu0952 D:::::::::::::::::::::L::::::::::::T:D::::::K::::::::::::::: NP1906A ::::::::::::::::::::::L::::::F:::::::::::A::K::::::::::::::: VNG0681 D:::::::::::::::::::::::::V::F:::::::D:::T::K::::::::::::::: hla0823 ::::::A:::::::::::::::::::V::::::::DR::::::::::::::::::::::: HVO_1444 ::::::::::::::::::::::L::::::::::::::::::::::::::::::::T:::: Hbo0110 D::::::::::::::::::::::::::::::::::T:::::::::::::::::::T:::: consensus IGLDVCLDASETLHEELGDRYKPAYLLKRKVEAGDLGKKTGQGFYDYD #oth ....11.1.11..2211....1....12...2..1....1.5...2.1 HQ2302A ::::I::H:T:::YN:F::::::::::::::::::::::::R:::::: rrnAC0771 :::::V:::::::Y:::::::::::::::::A:::::::S:::::::: Hmu0952 :::::V:::T:::::Q:::::Q:::::R::::::H::::S:N:::E:E NP1906A :::::::H:::::Y:::::::::::::::::::::::::::E:::::: VNG0681 :::::::::::::::::::::::::::Q:::D:::::::::A:::T:: hla0823 :::::V::::::::T:::::::::::V::::::::::::::K:::E:E HVO_1444 ::::I::::::::F:::::::::::::::::A:::::::::K:::E:: Hbo0110 ::::I:::::Q::::::::::::::::::::D::::::::::::::::