|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2935 | VNG0891 | Hut0428 | NP3508A | rrnAC0450 | rrnAC1301 | Hmu1123 | hla2392 | HQ2648A | HVO_1578 | Hbo3465 |
1987 | VNG0891 | 2926 | 1627 | 1668 | 1796 | 1789 | 1783 | 1745 | 1585 | 1770 | 1745 |
1956 | Hut0428 | 1627 | 2895 | 1808 | 1812 | 1814 | 1784 | 1698 | 1666 | 1615 | 1721 |
2259 | NP3508A | 1668 | 1808 | 2918 | 2088 | 2081 | 2124 | 1898 | 1777 | 1832 | 1883 |
2424 | rrnAC0450 | 1796 | 1812 | 2088 | 2963 | 2942 | 2257 | 1938 | 1785 | 1862 | 1980 |
2412 | rrnAC1301 | 1789 | 1814 | 2081 | 2942 | 2958 | 2249 | 1933 | 1780 | 1854 | 1972 |
2381 | Hmu1123 | 1783 | 1784 | 2124 | 2257 | 2249 | 2965 | 1937 | 1868 | 1923 | 1951 |
2255 | hla2392 | 1745 | 1698 | 1898 | 1938 | 1933 | 1937 | 2936 | 2004 | 2107 | 2096 |
2118 | HQ2648A | 1585 | 1666 | 1777 | 1785 | 1780 | 1868 | 2004 | 2994 | 2105 | 2254 |
2245 | HVO_1578 | 1770 | 1615 | 1832 | 1862 | 1854 | 1923 | 2107 | 2105 | 3011 | 2307 |
2308 | Hbo3465 | 1745 | 1721 | 1883 | 1980 | 1972 | 1951 | 2096 | 2254 | 2307 | 2978 |
401 symbols consensus MTTQVVVLGSGYAGAGAIKSLEDEL-GP-DADLTWISETDYHLVLHEVHRCIRDPSVQEK #oth .124...1.1....1..1441.2112.5222221.111411......2..2..2.42313 VNG0891 :::R:::::A::::::::AG::S::::::::E:V:VAD:::::::::A::V::::G:::: Hut0428 ::ES::::::::::::::QR::S::::D:R:::::V:DQP:::::::::::::::::K:H NP3508A ::DD::::::::::T:::N:::S::D:-:E::I::::DV:H::::::S:::::::DI::: rrnAC0450 ::EN::::::::::::::::F::::D:QT:V:V::::::::::::::S:::::::::::N rrnAC1301 ::EN::::::::::::::::F::::D:QT:V:V::::::::::::::S:::::::::::N Hmu1123 ::DN:::::A:::::::::::::::N:-:E::I::::D:::::::::S:::::::T:::: hla2392 :S:::::V:::::::::V:AF:::V::EGE::::::::H:::::::::::A::N:A:A:: HQ2648A :S:::::V:A::::T::VNR:::K:::S:ETE::::::H::::::::::::::::::ES: HVO_1578 :S:::::::::::::::VTT::E::::::::Q:::VA:H::::::::::::::::::ESS Hbo3465 :S::::::::::::T::V:R::E::::::::E:::V::N::::::::::::::E::AESN consensus ITIPVDEIKSPSTEFVQGRVEDIDTDERVVELADG-DTVEYDYLLVGIGSQTAFFGIEGL #oth 1111141..43315.24231331.1231415322213313..1.1122..5..112.1.1 VNG0891 :::::ED:::RT:::IEDS:T:::::::S:S::::::D:A::::V:::::E::TY::::M Hut0428 V::::::::::::T:IE::::T::VEH:T:GF::::ESIA::H:::A::::::::R:D:: NP3508A ::FD:T:::::::R:::::::::::::::IT:D:D:S::::::::::::::::::::D:: rrnAC0450 :A:::H:::Q:::S:I:DE:VG::::AQE:D:::S::::::::::::L:::::::::::: rrnAC1301 :A:::H:::Q:::S:I:DE:VG::::AQE:A:::S::::::::::::L:::::::::::: Hmu1123 V::::GD:::RQ:D:::AS:A::::E::::::D:D:S:::::::::A::::::::::::: hla2392 :::::::::::ESN::R:::V:V::N:Q:::TD:::T::D:::::L:V::T::::::::: HQ2648A VA::I:D::TSE:D:HT:::TNV:VND:T::IDN:EE::G:::::LA:::G:::YN:D:: HVO_1578 ::::::D::DD:::::K::AT:V:V:::A:::EG:::::D::::::A:::S::::::::: Hbo3465 VA::I::::E:Q::::K:H::N::VED:::::E::::-::::::::CL::A:::Y::::: consensus EEHAHTLKSLDDALEIHDAVAEAARDASRNDPAQVVVGGAGLSGIQTAGEIAEYRDEHRA #oth 3.3212..2.2..32..341541.51.134..14111....11.1.2.1.1.21.1432. VNG0891 A::PL::::::::M:::EQ:R:::Q::T:D:::N::I:::::::::S:::V::F::R:N: Hut0428 ::N:L:::::::::A:::::ESE:D::TMA:::R:::::::QT:V:V:::V:A::A:MS: NP3508A :::SL:::T::::::::E::S::::E:::::::::I::::::::::S:::::::::SN:: rrnAC0450 K:::L:::::::::::::K:QQ:::E::T:::::::I:::::::::::::V::F::::N: rrnAC1301 K:::L:::::::::::::KIQQ:::E::T:::::::I:::::::::::::V::F::::N: Hmu1123 A:Y:::::::::::N::::I:S:::::TQ:::::I::::::::::::::::::::::R:: hla2392 ::N::Q::::A::KA::ED:RS::AE:T:S::VE:I::::::::::::::::::::K::: HQ2648A :::::E::G:N::RA::SD::T::KE:TQE:::::I:::::::::::::::::::::::: HVO_1578 ::F::Q::G::::R:::QEIK:::A::::D::::::I:::::::::::A:V:::::TN:: Hbo3465 Q:FS:E:::::::R:::SDIKA::E::::D:::K:I::::::::::::::::G::::::: consensus PIDIHLVEGLDEVFPGNDPELQGALRKRLEAADVNILTGEFISEVDEDTVYIG-----DE #oth .3113...112312.231233.211.5111232151411211231121312311221224 VNG0891 :::VT:::A:P:I::PG:S:I:::::H:::D:G:T:::DDP:TAAS::AIEFD:::::ER Hut0428 :::VV:::::ES:L::ANSAF:S:I:D::DKRS:DVQ::N:V:S::D:A::FD::::::G NP3508A :LE::::::::N:::N:::VV:AK:::L::DK::Q:H:::::G:::D::::V:::::::: rrnAC0450 :::::::::::Q:L:NS:::::::::::::::::::KC::::G::::E:::::::::::: rrnAC1301 :::::::::::Q:L:NS:::::::::::::::::::KC::::G::::E:::::::::::: Hmu1123 :LE::::::::::M:NG:::::::I::::::::I::MC::::G::::::::V::::::E: hla2392 :V::K::::::::::::::Q::::::Q:::D::IE::::D:::KA:::A::F:GGEDEEP HQ2648A :ME:T:::::::::::::T:::::::E::::R::R:::::::::::SEM::V:GNDDN:A HVO_1578 ::::K::::M::I:::::::::::::R:V:DL:ID::::D:::K:::E::F::GGEDEAP Hbo3465 ::::T::::::::::::::::::::::::::R::E::::D:::K:::EN::L:GGEDE:P consensus EELDYDVLVWTGGITGQDEMEDVELDKDERSNRVHAESDFQTSDERVFAIGDCALIDQGG #oth 43.4..212....1..3523521433212222.35255211121111..2..31112.15 VNG0891 DS:::::F:::::V::PS:LS:::M:AEH--::LQ:S:TL:AD::::::V:::SM:S::N Hut0428 RD:A:::::::::::::RA::::RVT::HK:::LKTTTT:::D::::::L::A::V::P: NP3508A K:::::::L:::::::::AA:TANV:::D::::IE:A:N:::::::::::::A:::::PD rrnAC0450 D:::::::::::::::R:C:Q::D::::::NH:::::GN:::E::H::::::S:::::P: rrnAC1301 D::E::::::::::::R:C:Q::D::::::NH:::::GN:::E::H::::::S:::::P: Hmu1123 T:::::E:I:::::::R:AVR::::::::::H:IDS:R::::::D:::::::::::::P: hla2392 :::S::::I::::::::P:L:N::VE::::::::::G:::T:::D:::::::T::VE::D HQ2648A :K:P::T:::::::::HN:VT::GIN::D::Q::F:DA:::::N::I::V::T:::E::S HVO_1578 :::::::::::::::::P:AS::::EQ::::H:FF::E::::::D::::V:::::VE::P Hbo3465 ::::::::I::::::::E:VA:ADIE:::::::IFTDA::::::::::::::S:::E::T consensus -DDPAPPTAQAAWQAAEVAGENLARAIRGQPLKTWTHEDKGTVVSVGDDAVAHDV----I #oth 1131...1.....1..1.111.2..33314..43.22412..11.1.33.1.13.34326 VNG0891 :::V::::::::::::D:VAR:V:::ME:R::E:::Y::Q::L::::ET:I::::EMSG: Hut0428 :E:::::N::::::::D::A::I::S::::::TE:RY:N:::::::::E:::T::LY::- NP3508A Q:N:::::::::::::::::::I::E::::::TE:EY:::::LI:::GK::::N:::::K rrnAC0450 ::Q:::::::::::::::::::::::V::::::::::K:::::::::EK::::::::::V rrnAC1301 ::Q:::::::::::::::::::::::V::::::::::K:::::::::EK::::::::::V Hmu1123 ::::::::::::::::::::R:::::V:::::D:::YD:M::::::::K::::::EYMG: hla2392 :::V::::::::::::::::::::::A::A::QS:E:T:::::::::E:::::::::::M HQ2648A :ESV::::::::::::::::::V::::NEE::Q::R:D:::::::::::::::G:KFPVF HVO_1578 ::NV:::::::::D::D:::::I::::A:K:::R::FT:::::I:I:H:::::G:KFPVF Hbo3465 ::SV::::::::::::::::::V::TV::::::::::N:::::::I:::::::A:KLPGL consensus G-LPINTFGGPPAKLLKKGIAARWIADVTSTGRAAKAWPDM #oth 425.141.2143.24...42.12..32223532142.1431 VNG0891 A:A::R:::NM:::V::::A::::::KI::WS::M:::DAL Hut0428 -:S::E::N:LG:E::::V:::::::::S:FS::FS:::N: NP3508A ::::VD:::::A::A:::TV::::::K::GFSD::::F::: rrnAC0450 N:M::E::::M:::::::A::::::N:M:GV:::::::::: rrnAC1301 N:M::E::::M:::::::A::::::N:M:GV:::::::::: Hmu1123 S:V:VD::::FL:EN:::A:::K::RR:ST::::::::::: hla2392 ::M::K::::T:::::::S::V::::KIS::::GVS:FG:: HQ2648A :K::::V:A::A:RT:::::::::::::A::RH:LE::ES: HVO_1578 :EF:V:V::::L:RT:::::::N:::::::PK::LS::N:L Hbo3465 :K::::V::::A:RA:::::::K::S:::DAR::VE::DSL