Home |  Text search
[R] (BioY) COG1268 Uncharacterized conserved protein
6 genomes BUD1593 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG2316

-

HVO_0218

Hbo1343

- -

hla0041

NP1394A

HQ3664A

Pairwise sequence scores
Consensus score1396 NP1394A HQ3664A hla0041 VNG2316 HVO_0218 Hbo1343
845NP1394A 1418 670 839 768 735 735
1044HQ3664A 670 1403 850 832 892 957
1031hla0041 839 850 1380 818 927 879
1094VNG2316 768 832 818 1461 911 999
1122HVO_0218 735 892 927 911 1407 936
1124Hbo1343 735 957 879 999 936 1475

203 symbols
consensus       -MATETESVELVGDEAVGNIARAALFAALTGAFAYVSFPNPLSPAPVTLQVLGVFLAGIF
#oth            113.2222.1...12523.21.1.1..1.2..21..1111.2..31.11...1.....22
NP1394A         MTD:S:AD:D:::E:MAL:V::T::::::M:::::::::Y::::::::::::::::::LL
HQ3664A         ::S::A:::::::E:II:::V::::::T:::::::::I::::::V::S::::::::::A:
hla0041         ::::S::::D::::::AT:L:::::::::V::::::T::::V::VS:::::::::::::Y
VNG2316         ::Q:::DG::::::QT:E::::::V:::::::M:::::Q::V::::::::::::::::LY
HVO_0218        :::::R:::::::::L:::::::::::::M::SG:::::::I::I:::M:::V:::::::
Hbo1343         ::S:N:::::::::DV::::::::::::::::::::::Q:::::H::S::::::::::::

consensus       LGPVWGGASMVLYLAAGALGAPVFAGGSAGLGPLVGPTAGYLWSYPFAAALVGLVVHGGT
#oth            ...2..221111..31.22...1.21.21.214221321...1...3..232.321.134
NP1394A         :::L::::A::V::L::V::::::SA:E::I:VIL::QG:::L:::::::I::GI::R::
HQ3664A         :::F::SV::A:::LS::V:::::::::::I:::F:Y:::::::::V::TVI:MI:::RG
hla0041         ::::::A::I::::::::::::::Q:::::V:Q:::QS::::::::L:::A::A:::R:V
VNG2316         ::::::::::::::I::GV::::::::GS:::TF:A::G:::L::::::::T:::A::T:
HVO_0218        :::::::G:IA::::::G:::::::::::::A::::::::::::::V::VV::::::::I
Hbo1343         ::::::::::::::T:::A:::I:::::::::S:L:L:::::::::P::::I::L:::VS

consensus       TLADPRTVGTARLVGAMVAGTVVIYAFGTVGFAIVQRVGL---------IDAFIVAAAAF
#oth            4352224.2323122.1222.111.22.24121412442222111122143.1532231.
NP1394A         DIKPLE::SA:LMIA::ILS::::::::IPFMWWNLEMT::::::::::LN:V:AGGVV:
HQ3664A         ::HN:DS:::V::AL:LTC::IL::SL::I:::L::N:::::::::::::E::FLS:I::
hla0041         :PR:LD:::LPT::::::L:::::::L:VA:L:F:LSL:P::::::::::E:VT:G:V::
VNG2316         E:::::D::V:K::A::::A::::::A::::::::::PS:AAAFAPSALV:::L::G:::
HVO_0218        SAG:Y:-:S:P::::::::::::V:::::L:::Y:N:::::::::::::ES::WT:S:::
Hbo1343         G:V::EH:PV:::::::::::::::V::::::::::TG:ILSAFAPNVLW:::V:S:L::

consensus       IPAEALKIAAAIGIVRSDAAAAA
#oth            2.1.13.1...1..2...234.2
NP1394A         :::::A:M:::::::::::IR:E
HQ3664A         ::F:I:::::::::::::V:V::
hla0041         L::::::::::V:::::::V:::
VNG2316         :::::F::::::::T:::QLN::
HVO_0218        :::::F:::::V:::::::I::Q
Hbo1343         V:F::V:::::V::I:::::S:E