|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 1967 | hla2652 | Hut1269 | Hmu0766 | rrnAC0731 | VNG0582 | HVO_0841 | Hbo0694 | HQ1551A |
1457 | hla2652 | 2035 | 1395 | 1355 | 1351 | 1325 | 1388 | 1350 | 1376 |
1651 | Hut1269 | 1395 | 2121 | 1511 | 1593 | 1510 | 1536 | 1531 | 1512 |
1682 | Hmu0766 | 1355 | 1511 | 1971 | 1722 | 1532 | 1506 | 1540 | 1532 |
1754 | rrnAC0731 | 1351 | 1593 | 1722 | 1956 | 1559 | 1538 | 1622 | 1630 |
1705 | VNG0582 | 1325 | 1510 | 1532 | 1559 | 1973 | 1585 | 1653 | 1622 |
1696 | HVO_0841 | 1388 | 1536 | 1506 | 1538 | 1585 | 1968 | 1651 | 1631 |
1777 | Hbo0694 | 1350 | 1531 | 1540 | 1622 | 1653 | 1651 | 1951 | 1739 |
1776 | HQ1551A | 1376 | 1512 | 1532 | 1630 | 1622 | 1631 | 1739 | 2093 |
275 symbols consensus -----------MMSDNDTDED--------IRTDG-GTGIVAPDDETPTWSERKERSQGLS #oth 112223222234433431123122221222.1.122311.2......1.1...2133..1 hla2652 :::::MTDNDTP:T:GG:::E::::::::A::::GPPAT:P:::::::::::::H::::A Hut1269 ::MTEHDSPDDGV:EQP::::PVRTDETPV::::GE::::P::::::::::::::R:::A Hmu0766 :::::::::::-::::::ND:::::::::V::::S::::::::::::::R:::::TE::A rrnAC0731 :::::::::::-:::::::D-::::::::V::::S:::::S::::::A:::::::T:::: VNG0582 ::::::::::::SD:QP::::::::::::A:::-::::::S::::::::R:::::TT::: HVO_0841 ::::::::::::SDNEPEN:E::::::::::S:-::A::::::::::::::::A:KT::: Hbo0694 ::::::::::::TET:N:::E::::::::::::-::S:::::::::::::::::::V::: HQ1551A MSDNTTTSNTNTG::A:::AS:TDARERD::::-:::::::::::::A:::::N::T::: consensus RLTYEYFERSRREDQDLRQESDYVERDVLAFPTWPHEIVRNLAITSFFVGMILFLSATLP #oth 11..1....1....1...21.1.......1..1....43..1111...1.112122.21. hla2652 Q:::Q:::::::::E:::T::T:::::::G:::::::TL:::::::::::I:ILIA:LM: Hut1269 :T::::::::::::::::E::::::::::G:::::::V:::::L:::::::LV::A:A:: Hmu0766 :::::::::::::::::::Q::::::::::::A::::MM::::L:::::::::::::A:: rrnAC0731 :::::::::A:::::::::Q::::::::::::A::::MM::I:L::::::::::V::::: VNG0582 :::::::::::::::::::::::::::::::::::::L:::::::::::::::::G:::: HVO_0841 :::::::::A::::::::T::::::::::::::::::T::::S:A:::::::::::::M: Hbo0694 ::::::::::::::::::::::::::::::::::::::I:::S:A::::::::::::::: HQ1551A :::::::::A::::::::::::::::::::::::::::I:::::A:::T::::::::::: consensus PHIGAPANPSSTPAIILPDWYLYWSFGLLKLGPLNPELAILGGQKLMADRTYGVLANVVV #oth 11326...223..12................32...1112..1321111132.12.121. hla2652 A:Y:E::::G:::::::::::::::::::::N:::::::V:::NIV:SNEFL:IT:HGI: Hut1269 ::::::::SGV::PT:::::::::::::::::::::D::L::D::::::::F:::::L:: Hmu0766 :EMPH:::ANQ::::::::::::::::::::QS::::ISL:::::::S::M:::I::::: rrnAC0731 :EMPN:::S:V:::::::::::::::::::::::::D:S::::S:::::::::::::::: VNG0582 ::L:Q:::::T:::V::::::::::::::::SA:::::::::::::L::::F:::::::: HVO_0841 ::::G:::::::::V::::::::::::::::::::::I::::D:M::::::::::::G:: Hbo0694 :::A::::::::::::::::::::::::::::::::::S:::::::L:::P::::::::: HQ1551A ::::S::::::::::::::::::::::::::::::::::::::E:::S:::::::::::: consensus VGFIAIVPFLNKGSARRPVEQPFWAAVGVGGVIFAFTIAALSIKNLIPMNSHLLFDLTFL #oth 1.2112...1..............111.15..1112.1121121124.2331.111.2.2 hla2652 F:V:GL:::::::::::::::::::::::T:::LS::L:::A:Q:FF:ITLD::LT:::M Hut1269 ::A::V:::I:::::::::::::::::::F:::LSV:L::::::::L:LD:::::::::: Hmu0766 :::V::::::::::::::::::::::::MA::V:SL::::::VQ:::::S:D::L::S:: rrnAC0731 :::V::::::::::::::::::::::::MS::::SL::::::::::V::D:::::::::: VNG0582 :::::::::::::::::::::::::S:::M::V:::::S:Y:A:THL:L:P::S:::A:: HVO_0841 ::::::::::::::::::::::::S::::F::V:::::SL:A::::M:::VD:::::::: Hbo0694 ::A::::::::::::::::::::::SI:::::V:::::SVY:A:::V::DV::::::::: HQ1551A ::VV::::::::::::::::::::::::::::::::::SVY:A:::::::V::::::::I consensus LPIVAGAITYAVLKTMREGYMYDLNRRYYRLRPPK #oth 4.43414111.2.11.....113..1...2..... hla2652 ::VLG:I:::::::::::::::G::::::M::::: Hut1269 ::F:GAF::::A::S::::::FE:::::::::::: Hmu0766 F:::C::::::A:R:::::::FN:::::::::::: rrnAC0731 V::ISAT::::::::::::::F::::::::::::: VNG0582 I:PM:::VA::I:::::::::::::K:::K::::: HVO_0841 ::F:F:T:::::::::::::::N:::::::::::: Hbo0694 A:L:::VV:::::::::::::::::K::::::::: HQ1551A ::V:::FV:W::::::::::S::::::::::::::