| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1408 | hla0259 | HQ3247A | NP1024A | Hut2134 | HVO_0313 | Hbo1168 | VNG2142 | Hmu2595 | rrnAC3156 |
| 997 | hla0259 | 1393 | 814 | 850 | 822 | 868 | 878 | 795 | 911 | 918 |
| 1013 | HQ3247A | 814 | 1395 | 781 | 768 | 899 | 925 | 841 | 927 | 861 |
| 1033 | NP1024A | 850 | 781 | 1399 | 889 | 870 | 918 | 916 | 982 | 902 |
| 1007 | Hut2134 | 822 | 768 | 889 | 1483 | 876 | 868 | 885 | 920 | 978 |
| 1125 | HVO_0313 | 868 | 899 | 870 | 876 | 1404 | 1055 | 963 | 1019 | 995 |
| 1102 | Hbo1168 | 878 | 925 | 918 | 868 | 1055 | 1403 | 893 | 1007 | 987 |
| 1082 | VNG2142 | 795 | 841 | 916 | 885 | 963 | 893 | 1410 | 998 | 970 |
| 1162 | Hmu2595 | 911 | 927 | 982 | 920 | 1019 | 1007 | 998 | 1396 | 1010 |
| 1155 | rrnAC3156 | 918 | 861 | 902 | 978 | 995 | 987 | 970 | 1010 | 1411 |
209 symbols consensus MSLDTVVEDIRDEARARAEEIREDADERAEEIIAEAEADAEDIREEREAEVERQIEQERE #oth ...21.1..1.11.12..51.3521222.12.132..31.14132313312233231..1 hla0259 :::::::::V:::::::::D:::A:ESE:D::V::::::::R:::::L:::D:::D:::: HQ3247A ::::::::::::::Q:::S::QA:::::::K::E:::::::::L:::KD:::E:::R::: NP1024A ::::::::::::::::::D:::SEGE:::::::D:::RE:D::VD:A:R:A::K:S:::D Hut2134 :::E:::::::EQ::S::R::T:A:::Q::S:VS:::D:::S:VAD::R:I::::A:::: HVO_0313 ::::N::::::::::::::D::Q:GQ:Q:D::V::::::::ELL:S:K:D::Q:L:R::: Hbo1168 ::::N:::::::::::::::::::GEQ::::::E:::T:::ELL:S:KTD::::V::::: VNG2142 :::E:::::::::::E::K:::A::::::D::V:::::::D::IADA::::TAE:D:::: Hmu2595 :::E::A:::::::::::::::I::::::::::EA::::::E:::Q:Q:::::E:::::: rrnAC3156 :::Q::::::::::::::Q::SDA::::::::::D:::::DQ:::::::::::T:::::: consensus QALSSAKLEAKQARLEARRDVLEDVRDDVEDELAALEGDRREELTRSLLDAAAAEFDDDD #oth 14....2.....4..3...12.24.344..3412512112.12..24.122154..1123 hla0259 :T::::::::::E::G:::::::::Y::::AAIEG:D::::R:::ET::::TL::::::E HQ3247A ::::::N:::::N:::::::::D::LNR::::::S:SNAK:::::KP:VT::IT:::::E NP1024A :K:::::::::::::::::E:::E:H::::AQI:DID::E::A::::::::::E:::G:- Hut2134 RR::::::::::E::N:::E:::T:::Q:::G::T:::::::T:::E::ED:LE::EGS- HVO_0313 :::::::::::::::S::::::QR::EQ::R:::E::::::::::::::::::V::E:A: Hbo1168 ::::::::::::K:::::::::::::GQ::E:::::S:::::T:::::::E::D:::::A VNG2142 :Q::::E:::::M:::::::A:QS::SA:::RIV::D::E::::::E:::::ST:::GA: Hmu2595 :K::::::::::E:::::::::QS:::S::A:I:S:::::::::::T:::::T::::::A rrnAC3156 :R:::::::::::::N::::I::::HG::::A::::::::::::::A:::::VD::::S: consensus EVRVYGRADDADLLESILEDYDGYEYAGEYDCLGGVVVESDQSRVRVNNTFDSILEDVWE #oth 415122132.33.223212122233321331......1.145..11.......1.241.1 hla0259 D:A::THTE:V::V:ELV::RNA-VVD::I:::::::A:::T::::::::::::::S::D HQ3247A T:KL:A::::::::N:L::EHEKA:::::::::::::A:GQ::::::::::::::DA::: NP1024A S:::H:HE:::::::G:VA::::F:VGEPV:::::::::::A:::::::::::::::::: Hut2134 ::::F::SE::E::::::A:::A-SL::DV:::::::::::::::::::::::V:::::: HVO_0313 ::S:::::::EE::S::::::::::F:::R:::::::::GSN:::::::::::V:DT::: Hbo1168 D:V::::ES:QS:I:D:::EH::::FG:T:E:::::::::Q::::::::::::V::G::: VNG2142 T:::F:::::EA:ISE::D::::::::::::::::::::::A::I::::::::::A:A:: Hmu2595 G:Q:::::::::::::::A::::::L::::::::::::::ES::IS:::::::V:D:::: rrnAC3156 :LS:::::S:QS:::DV:D::::AT::::R::::::::::NE:::::::::::::::::: consensus DNLKAISARLFDD---------------- #oth 231231.31..123211111111111111 hla0259 :E::N::E::::Q:::::::::::::::: HQ3247A ET:GDV:EQ:::Q:::::::::::::::: NP1024A E::RE::::::EE:::::::::::::::: Hut2134 :QI::::D:::E:TDVDGDLAADAETTEQ HVO_0313 ::::EV:::::::Q::::::::::::::: Hbo1168 ::::EV:S::::Q:::::::::::::::: VNG2142 N:::::::::::EEQ:::::::::::::: Hmu2595 N::RD::S:::EEQ::::::::::::::: rrnAC3156 :::::::D:::E:Q:::::::::::::::