|
Pairwise sequence scores | |||||
---|---|---|---|---|---|
Consensus score | 2944 | hla2336 | VNG2171 | rrnAC1300 | Hbo4038 |
1602 | hla2336 | 3023 | 1104 | 1215 | 737 |
2148 | VNG2171 | 1104 | 2956 | 1654 | 831 |
2213 | rrnAC1300 | 1215 | 1654 | 3058 | 922 |
1132 | Hbo4038 | 737 | 831 | 922 | 1599 |
417 symbols consensus M-DLPAA------FRFDYDGAALRYGPDAVRDLGAALDERDADRALVVCGSTVGATPAVM #oth 123313121111212221333321222231231233112333231111212211322221 hla2336 -:M::I:D::::S:EH::Q:CEI:::RGR:AE::D:::::ELGD:::::::N:::NEDL: VNG2171 :SQS::::::::::::::ESP:::F:::S::::D:S::AH:::T::::T:::::T::::: rrnAC1300 :A:T:V:GDLEAP:::E::P:T:::A:::::S::TE:::QGY::::::::T:::E::::: Hbo4038 -:-----::::::----------------------------------------------- consensus DPVRDGLGDRLAGVFAETTPAKRLETAFDALERRAEADADALVAVGGGSSLDVARQAAAL #oth 112121111111111221123112311213221322321122111111112121332331 hla2336 ::I:E::::::::::DG:::D::V:::::L:D::::VG::::::::::::::I::::TL: VNG2171 :::::::::::::::::::GE:::T:::::A::V:AT::::I::::::::I:::TV:::: rrnAC1300 ::::::::::::::::::::::::G::Y:G:::FR:::::C:::::::::::::KIISI: Hbo4038 ------------------------------------------------------------ consensus AATDRD----RAAVARAAADLGTIAIPDAALPPIVVVPTTLAGADISQGAGIAA-APDAC #oth 332322111122223333323223232332221222211121111313222332132123 hla2336 DVDG::LADL::DAEVG:DA::DL:PRTDPAL:V::I:::F::::V:T:GSLEVLDA::S VNG2171 TG:TQS::::::::::TVR:TA:VP:::G::::::::::::::::::::::::::H:::G rrnAC1300 ::::::::::PT::GT:F::S::::V:E::::::IA:::::::::L:IV::VT:::::T: Hbo4038 ------::::--------------------------------------------:----- consensus PVDDPAS--VSDRRLMPAAACADPVLFATTPRSVLAASAMNGFNKGIETLYAANATPITD #oth 222323222222332..12331..2.21...211..1.....11.....2..12.1.11. hla2336 :TGQ:MT::::GGGA:::IDL:::A::E:::Q::::G::::::::::::P:::D:S:VS: VNG2171 V:::TH:AVAD:::::::SVV:::::A:::::::::G:::::L::::::::::T:::::: rrnAC1300 :::E:::GG:::PE:::::::Y::E:I::::::::::::::::D:::::::::::::::: Hbo4038 -------::------::R:TFY:::::::::KQI:::::::::D:::::I::R::::::: consensus ATASHGLGLLAAGLRAL-GNADDDPAALAPVAQGLLLVQYGISRPNATTLSLIHAFGHAL #oth ...11.221.331.2221133222132332232.11..11.111233111.21..1..11 hla2336 :::V::TR::RDA:PHVA:DRP:::::TDRAVV:A::::L:------RKI:V::::::GF VNG2171 ::::::V:T::::::::::T::PT:ETM::ILR:::::E::::::D::::::T::::::: rrnAC1300 ::::::::::TE::L:F:::G::::WVYQS:T:::M::::::::A:G::::::::L::G: Hbo4038 :::VR::K::EG:::Q::NEQSVSEK::E::::::::::::::::GE::::I:::::::: consensus TRASDVQQGAAHAIIAPHVLAYLFDNVDGRRRLLAAALGVG----DDAAPAEAVVDAVAA #oth 2.3221...22.1111..1.11..131111.32..31.2121111.23221211123.32 hla2336 A:RY:::::TV::VV::::::::::E::AS::A::NG:::ATAGR::::I::D::SE::: VNG2171 S:::PI:::V:::VVT:::::H:::ST::::DR:::::D::::::::PD::S::I:::T: rrnAC1300 ::TD::::::::G:::::A:S:::EQ:::::S:::D::::::::::ADN:GT::::R:SE Hbo4038 ::S:A:::::M:G:::::::S:::E::A:::E:::E::-CS:::::VS:S::DI:AS:EW consensus VRDALGLPSRLRDVDGPDRAEFPAVAEAVLADPFMANAPSGLDPTREDIAGVLRAAW #oth .112.21.21..1211112221121.22222.211311.21122.2221321.23.1 hla2336 :::S:PV:::::EL:PV:EDD:::I::YIAD:WS:EQ::AD::A:P:A:E::::E:: VNG2171 ::::::::A::::T:::A:S:LQ:::A:AV::::VD:::D:VPL::A:ATEI:D::: rrnAC1300 :VTT::::TQ::::A::::::::E::D:::E:A::M:V::::E:::D::V:::ES:: Hbo4038 :::::S::::::::::::P:A::D:::S:::::::::::::::::S:E::D:::D:Y