|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3931 | HQ1001A | NP0596A | Hut2316 | rrnAC2711 | Hmu3045 | hla0547 | VNG2411 | HVO_0001 | Hbo1486 |
3134 | HQ1001A | 4206 | 2885 | 2796 | 2931 | 2945 | 2911 | 2905 | 2915 | 2897 |
3268 | NP0596A | 2885 | 4255 | 3035 | 3057 | 3126 | 2929 | 2925 | 2944 | 2998 |
3213 | Hut2316 | 2796 | 3035 | 4434 | 3048 | 3048 | 2877 | 2904 | 2902 | 2933 |
3315 | rrnAC2711 | 2931 | 3057 | 3048 | 3891 | 3224 | 2991 | 2956 | 3002 | 3041 |
3322 | Hmu3045 | 2945 | 3126 | 3048 | 3224 | 3866 | 3046 | 2924 | 2986 | 3064 |
3333 | hla0547 | 2911 | 2929 | 2877 | 2991 | 3046 | 4166 | 2939 | 3109 | 3173 |
3160 | VNG2411 | 2905 | 2925 | 2904 | 2956 | 2924 | 2939 | 3866 | 2944 | 2919 |
3285 | HVO_0001 | 2915 | 2944 | 2902 | 3002 | 2986 | 3109 | 2944 | 4221 | 3301 |
3339 | Hbo1486 | 2897 | 2998 | 2933 | 3041 | 3064 | 3173 | 2919 | 3301 | 4290 |
631 symbols consensus ----MDED--------------------------------G-SNDDSPATGDRDSDEEND #oth 111112264432222222221122222344444455545435547645647366556573 HQ1001A :::::HNN::::::::::::::::::::::::::RIHNNSSSD:LE:SHENK:::QSTSP NP0596A :::::TN:DTA::::::::::::::::SEPRTQDRLERGS:DTDE::ED:V:I:T:T:GS Hut2316 MQDTE::SNSPVTEDSLTDDHSEPSTGGVVDPPAGTDRSG:D:DP:::DES:PAP:V:D: rrnAC2711 :::::TDK::::::::::::::::::::::::::::::::-:::NPA::SDPSTTETS:: Hmu3045 :::::::T::::::::::::::::::::::::::::::::-:G::AD:N:P::E:S::T: hla0547 :::::::G::::::::::::::::::::::::::ENTPQADE:K:N:GI::::SGTDQV: VNG2411 :::::TD:::::::::::::::::::::::::::::::::-:------------------ HVO_0001 :::::::EENPR::::::::::::::GGARGEAGNSTPDD:GADA:AD:GT:T:DTPS:: Hbo1486 ::::::D:TPKRDDGTRQINHSDTDDVASTEDDSSSAASG:NTTSGE:VS::AK:E:AL: consensus ADGGDGSLDSDSDDDRRNGDEDID------------------------D-SS-DVDLDDV #oth 554356564465534555444263464434334233343343543333454453352142 HQ1001A TES::FT::E:MSQ:NNHS:TANSNT::::::::::::::::::::::RNRTSSASE::I NP0596A D:VATP:QS:G:PVETGGFS::ESDSERTDS::::::VPTGSEHARNV:GF:G:I::E:L Hut2316 GA::GL:HE::PP:SN::::D:PVDEDWTTRPSEESFGSSVEATPSDTAG:IDTDL::EI rrnAC2711 :::S::Q::AET:PGTST:PS:L:::::::::::::::::::::::::-:--:::I::NL Hmu3045 D:----------QP::D:FGT:L:::::::::::::::::::::::::-:--:::V:::I hla0547 ETD:SDET:ANL::PPSP:STNS:LNTDLQSDPETDVSTDIDVGSGGR:R::P:::F:G: VNG2411 ----------R:T:E::TA:R:F-::::::::::::::::::::::::-:--:E:::::: HVO_0001 :S:::::A::-:AVEDDVSP::::IQASIGPDADAPDASDEDLD::::QHKDP::G::K: Hbo1486 GE:SPTDENPAT:::EPVTA::::IRESIGPSG::::STDGETD:::::D::T::S::E: consensus DL------DDDDDA---SRGLFDDLLSGEPIFENKEVLRPSYTPHKLPHREEQINNMATI #oth 2511111142335511113....1..2.................11....21...21... HQ1001A :H::::::SENREE:::-Q::::N::::::::::::::::::::R:::::T::::Q:::: NP0596A ::APDDETEE:GE:DEA:::::::::E::::::::::::::::::::::::::::::::: Hut2316 VF::::::E:EE::DEA:::::::::::::::::::::::::::R::::::::::::::: rrnAC2711 :A::::::GS::PSDEA:::::::::E::::::::::::::::::::::::::::::::: Hmu3045 :T::::::GE:GATDEA:::::::::::::::::::::::::::::::::::::::I::: hla0547 V::::::::::::N:::-Q::::::::::::::::::::::::::E::::ND:::R:::: VNG2411 LD:::::::E:::E:::--::::::::::::::::::::::::::E::::ND:::::::: HVO_0001 V:::::::N::EGS:::-K:::::::A::::::::::::::::::E::::TD:::Q:::: Hbo1486 V:::::::::GGSD:::::::::::::::::::::::::::::::E::::T::::Q:::: consensus LVSALRGETPSNILIYGKTGTGKTASAKFVSQELESTSQKYDVPCEVEYINCEVTDTQYR #oth ..2....1.......................1...3..2..1.1.2.1............ HQ1001A :::::::D:::::::::::::::::::::::::::::::::::A:::::::::::::::: NP0596A ::T::::::::::::::::::::::::::::E:::T:::::E:::::Q:::::::::::: Hut2316 ::A::::D:::::::::::::::::::::::E:::R::A::E:::D:::::::::::::: rrnAC2711 ::T::::D:::::::::::::::::::::::E:::T:::::E:::::::::::::::::: Hmu3045 :::::::D:::::::::::::::::::::::E:::T:::::E:::M:::::::::::::: hla0547 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2411 ::A::::::::::::::::::::::::::::::::K::K::::::::::::::::::::: HVO_0001 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1486 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus VLAQLANKFIEKNRAYIEDRIAELEDLRSR----AADDPAA--LE--------------- #oth .......1..12.55613422221431143111115332332212122222112222222 HQ1001A ::::::::::::::NQ:DK::D::KT:Q:SDQYLSGSASS:ESID:SVDTADDTISKSPD NP0596A :::::::::::::E::::S:LD:::A::D:::::::E:::::::D::::::::::::::: Hut2316 :::::::T:::N:E:H::::L::::::QD::::::EA::NE::::::::::::::::::: rrnAC2711 ::::::::::D::AQL:D:::::::E:Q:Q:::::RENT::::::::::::::::::::: Hmu3045 :::::::::::Q::T::G:::E::DT::E::::::TSN:DGDL:A::::::::::::::: hla0547 :::::::T:::::Q:V:A:QLERCRE:::A:::::::A::::::A::::::::::::::: VNG2411 :::::::T::DQ:::FVDA:::D:S:::AQ:::::D:::N:::::IGGSPGDDRTGNESS HVO_0001 :::::::::::::VER::AEQER:DEM:T::::::TE::N:::::::::::::::::::: Hbo1486 :::::::::::::FDV::NELDR:::::T::::::R:T:DL:::A::::::::::::::: consensus ------------DTEFDSLDDVDARIESLEADAEEMEEVPMTGWPTDRVYSTFFDAVDYH #oth 1222222221124251213332221124.22.431114............21..1....4 HQ1001A ESTGEYLNLSDIASP:::AR:L:D:::::R::R::::L:::::::::::::::::::::: NP0596A ::::::::::::::::::VAA:E:E:DT::T:L::FDP:::::::::::::::::::::: Hut2316 ::::::::::::G:::AT:EA:S:E:::::D:LASF:T:::::::::::::::::::::T rrnAC2711 ::::::::::::E:A:G:::::E:E:::::::KS:F:::::::::::::::S:::::::: Hmu3045 ::::::::::::E:D:ATV:EI::E::R::::RA:F:::::::::::::::S:::::::: hla0547 ::::::::::::::::AT:::L::::DE::T:::::::::::::::::::::::E::::: VNG2411 EGSDVSDSFSDLRER:::VAEI:D::D:::::KA:::Q::::::::::::A::::::::V HVO_0001 ::::::::::::E:PY::IAEI:E:AAE:DD::D:::T::::::::::::T::::::::K Hbo1486 ::::::::::::::S:::::G:EE:::Q::T:C::::T:::::::::::::::::::::N consensus ERVVVIMLDEIDKLVEKSGDDTLYNLSRMNSELDNSRVSIMGISNDLKFTDFLDPRVKSS #oth ...1......1......................31..1..1................... HQ1001A :::A::::::V::::::::::::::::::::::::::I::I::::::::::::::::::: NP0596A :::::::::::::::::::::::::::::::::S:::::::::::::::::::::::::: Hut2316 :::::::::::::::::::::::::::::::::E:::::::::::::::::::::::::: rrnAC2711 :::::::::::::::::::::::::::::::::E:::::::::::::::::::::::::: Hmu3045 :::::::::::::::::::::::::::::::::ER::::::::::::::::::::::::: hla0547 :::::::::::::::::::::::::::::::::NR::I:::::::::::::::::::::: VNG2411 :::A::::::::::::::::::::::::::::::::::::I::::::::::::::::::: HVO_0001 :::::::::::::::::::::::::::::::::::::I:::::::::::::::::::::: Hbo1486 :::::::::::::::::::::::::::::::::S:::I:::::::::::::::::::::: consensus LGEEEIVFPPYDANQLRDILQHRADVAFKSDALTDDVIPLCAAFAAQEHGDARRALDLLR #oth .............1......12.1111..511.11..1...................... HQ1001A :::::::::::::::::::::Y::::S::::::::::::::::::::::::::::::::: NP0596A :::::::::::::T::::::::::EI:::P:T:S:::::::::::::::::::::::::: Hut2316 :::::::::::::::::::::A:::::::D:::SE::::::::::::::::::::::::: rrnAC2711 :::::::::::::::::::::A:S:::::G::::E::::::::::::::::::::::::: Hmu3045 :::::::::::::T::::::D::S:::::::::::::::::::::::::::::::::::: hla0547 :::::::::::::::::::::::::IS::Q:::::::::::::::::::::::::::::: VNG2411 :::::::::::::::::::::::S:::::A:::S:::L:::::::::::::::::::::: HVO_0001 :::::::::::::::::::::::::::::PG::::::::::::::::::::::::::::: Hbo1486 ::::::::::::::::::::::::::::::G:::E::::::::::::::::::::::::: consensus TAGELAERDQADTVEEDHVRQAQDKIELDRVVEVVRTLPTQSKIVLFAIILLEKNGVHNI #oth ........2122413.2...2..1.......1...........1..1121...1...111 HQ1001A ::::::::S:TN:::::::::::::::::::I::::::::::::::YS::::::::::S: NP0596A :::::::::RTE:IT:K:::K::E:::::::::::::::::::L::Y:T::::::::::: Hut2316 ::::::::::I:L:A::::::::E:::::::::::::::::::L:::S:::::::::::: rrnAC2711 ::::::::::T:N:L::::::::E:::::::::::::::::::::::::::::::::::: Hmu3045 ::::::::::T:C::::::::::E:::::::::::::::::::::::::::::::::::: hla0547 ::::::::S::EI:A:K:::::::::::::::::::::::::::::::V::::::::::: VNG2411 :::::::::::EN:T:::::R::::::::::::::::::::::L::Y::L:::D:::::V HVO_0001 ::::::::G:::::::A::::::::::::::::::::::::::::::::::::::::R:: Hbo1486 ::::::::G:::::::A::::::::::::::::::::::::::::::::::::::::R:: consensus NTGEVFNIYKRLCEEIDADVLTQRRVTDLISELDMLGIVNAVVVSKGRYGRTKEISLSVP #oth .....1....2..1.1.1.1.....................1............11.... HQ1001A :::::::::::::::L:T:::::::::::::::::::::::I:::::::::::::::::: NP0596A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2316 :::::Y:::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2711 ::::::::::N::::::::I:::::::::::::::::::::::::::::::::::::::: Hmu3045 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0547 ::::::::::::::::::::::::::::::::::::::::::::::::::::::MG:::: VNG2411 :::::Y::::T::D:L:::::::::::::::::::::::::::::::::::::::::::: HVO_0001 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1486 :::::::::::::::::::I:::::::::::::::::::::::::::::::::::::::: consensus IDETEAVLLSDSRLGDIEDAQPFVQARFDN- #oth 41...1..22...11211221..1....111 HQ1001A :E:::T:::::::::N::N:::::::::::: NP0596A L::::::::::::V:EV:::::::::::::: Hut2316 Q:::::::H::::::::::V:::I:::::Q: rrnAC2711 TE:::::::::::::::D:V::::::::::: Hmu3045 :::::::::::::::::::V::::::::::: hla0547 VE::::::::::::::::N:::::::::::: VNG2411 VE::::::EA::::S::::IT:::::::E:N HVO_0001 :::::::::T::::::::S:::::::::::: Hbo1486 ::::::::::::::::::N::::::::::::