|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1444 | VNG1168 | hla1502 | HQ2894A | HVO_2747 | Hbo2480 | NP3680A | Hut1312 | rrnAC0258 | Hmu1189 |
959 | VNG1168 | 1477 | 720 | 786 | 840 | 852 | 705 | 774 | 786 | 826 |
977 | hla1502 | 720 | 3892 | 829 | 787 | 878 | 749 | 804 | 839 | 867 |
1080 | HQ2894A | 786 | 829 | 1825 | 912 | 1052 | 801 | 854 | 828 | 863 |
1017 | HVO_2747 | 840 | 787 | 912 | 1460 | 1020 | 781 | 824 | 854 | 848 |
1202 | Hbo2480 | 852 | 878 | 1052 | 1020 | 1604 | 891 | 913 | 936 | 961 |
999 | NP3680A | 705 | 749 | 801 | 781 | 891 | 1440 | 937 | 837 | 862 |
1072 | Hut1312 | 774 | 804 | 854 | 824 | 913 | 937 | 1414 | 906 | 953 |
1065 | rrnAC0258 | 786 | 839 | 828 | 854 | 936 | 837 | 906 | 1436 | 1041 |
1122 | Hmu1189 | 826 | 867 | 863 | 848 | 961 | 862 | 953 | 1041 | 1438 |
535 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG1168 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1502 VRSVIAGPRDHGPGVVVGRGRLGESTPRARLQQRRGRLRVVAGRTQGTDIRARVVVLAEQ HQ2894A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2747 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2480 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP3680A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1312 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0258 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1189 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG1168 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1502 VLRPLAVALDAPVAEIGVGTDPVVLAHALADRLAGVLTRLGVGGEPVEDGSRLESDLQAD HQ2894A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2747 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2480 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP3680A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1312 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0258 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1189 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus --------------------------------------------MSDTESGDA------- #oth 111111111111111111112222222222222222222122222244234323311111 VNG1168 ::::::::::::::::::::::::::::::::::::::::::::::::STT::NS::::: hla1502 RRVSALSLVVERCARGREQRLAAETELEARGVRIGRNVVGPRLGVV:V:ELEDVPQPLVV HQ2894A ::::::::::::::::::::MDDVGASNLLPASLFKCTLGVHIVITM:::Q::DA::::: HVO_2747 :::::::::::::::::::::::::::::::::::::::::::::TR::::::DA::::: Hbo2480 :::::::::::::::::::::::::::::::::::::::::::::TSA:::::DP::::: NP3680A :::::::::::::::::::::::::::::::::::::::::::::::DGDDT-::::::: Hut1312 ::::::::::::::::::::::::::::::::::::::::::::::SD::DT-::::::: rrnAC0258 :::::::::::::::::::::::::::::::::::::::::::::TES:::G-::::::: Hmu1189 ::::::::::::::::::::::::::::::::::::::::::::::::::::-::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG1168 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1502 VRLTGIAFGRPKEDRQRGAVGVVRVGVEILDEYVPESEQGRRIGGRFAGGVQQVALALDL HQ2894A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2747 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2480 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP3680A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1312 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0258 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1189 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 VNG1168 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1502 DTEVAGERRVVALAEHRLAEGAVVVLEPPGRVVEPIVERLLVQQHALGAGLVHTVRGEQT HQ2894A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2747 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2480 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP3680A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1312 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0258 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1189 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus --------------------------------------------DAETAVVLDHLPHGRP #oth 111111111111111111111111222233333333223342442547112..2.22.33 VNG1168 ::::::::::::::::::::::::::::::::::::::DSGADG:S:S:::::F:A:::S hla1502 GFWLSLVATGREAIAVTPRASGFFTGQNRKTHMTDPETDAPAAD:GPVV:L::V::N::: HQ2894A ::::::::::::::::::::::::NSVDKSDQSDGRNTSADAET:IRH::I::::::::A HVO_2747 ::::::::::::::::::::::::::::::::::::::::::::TT:YV::::V:R:::Q Hbo2480 ::::::::::::::::::::::::::::DTSVDETENGADATTE:::F::::::::::Q: NP3680A ::::::::::::::::::::::::::::::::::::::::::::A:R::::::F::R:S: Hut1312 :::::::::::::::::::::::::::::::::::::::::::::VA:::::::::R::S rrnAC0258 :::::::::::::::::::::::::::::::::::::::::::::TMM:A:::V:::::: Hmu1189 :::::::::::::::::::::::::::::::::::::::::::::G:P:::::F::::KS consensus DDDRPQYQKSPLAYALGERDFRLYELTLDD-DA--DISIGDRIDVDP----EAVDRVREV #oth 42111225351211123252.313.35163112111142211242634432362445332 VNG1168 --:GRS:GDGAVG::VSTI::T::::S:SS:::::::G:L::VQ:R:EFE:TGI::G::: hla1502 :::::::R:::V::G::TDA:::::::::E:E::::V:VSH:LAL:G::::P::G:Y::: HQ2894A :NN::RH:RD::::G::::::::::::::A:::DI:::::::VV:G:TEAR:L::EF:QI HVO_2747 G:::RRFDAA:I::::::S::::L::::VE::::::V:::::LV:S:VADS:LIQS:E:L Hbo2480 :::::R:K:::::::::::::::F::R:G::ES:::::::::VV:F:SEERD::EEL::: NP3680A S::::::E:::V:F:V::E::Q:V:AA:T::::::G:N:::::EI::VG::DN:KDL:T: Hut1312 :::::::E:E:::::VATA::Q:L:M::I:::::::::F::I::L:G:::::VIETR:T: rrnAC0258 G:::::H::E::::::DIDE:YI:::Q:A:K::::::AF:::::L--::::TEFG::T:: Hmu1189 E::::::::Q:::::M:TE::::::IVVGE:ET:::VTF::::::HS::::TDF:::SV: consensus EYDDLSSGAQSELDYAVEDIVEANERRFVDFYNDAQPITLRLHQLNLLPGIGKKLRNNIL #oth 214.1232.52.21.11.221242141....1.1.1..11...2........11..141. VNG1168 ::::::D::R:::::V:::V:D::::::::::::::::S:::::::::::::E:::D::: hla1502 SF:::TRN:AA:IE::::::::GD:K:::::::E:G:::::::::::::::::Q:::KV: HQ2894A S:A:::NT::N:VE::::::IKT::::::::::::::::::::::::::::::::::::: HVO_2747 S:G:::NT:TA:V::V:::::::D::::::::::::::::::::::::::::::::DK:: Hbo2480 ::::::NT:L:::E:V::::::E::::::::::::::::::::::::::::::::::::: NP3680A ::R::T:T:E:::E::I:S:ID:D:AQ::::::::::::T:::V::::::::::::::V: Hut1312 D:G:::::::::::::I:::::D::G:::::F:::::::T:::S:::::::::::::G:: rrnAC0258 :FE:IP:::R::::::::EV:::::Q:::::::::::::::::::::::::::::::T:: Hmu1189 :::::P:::::::::::::L:::EAG:::::::E:::::::::::::::::::::::S:: consensus DERKR-GPFESFEDLEERVSGLHHPKEVLVERILEELREDDLKYRTFVRRDD--- #oth 13...22.1.1.21223..3...5.331121..31.1313.1..45.12334211 VNG1168 E::::R::::::A:VS:::D:::T:Q::I:::::D:I:DP::::YN:AAS--::: hla1502 :::::::::::::EVS:::T:::::R:::::::V::IH:E:::::R::GYEE::: HQ2894A :Q::::::::::DEI::::A:::::SS::KD::::::H::::::NV::APSE::: HVO_2747 ES:::Q::::::::::A::::::R::::I:::::D:::DN:V::K:::G::GQ:: Hbo2480 ::::::::Y:::::::D::::::::RD::::::M::::D:::::K:::G::T::: NP3680A :A::::Q:::D:D:I::::::::D::G::I:::T:::Q:::::::I:A::::E:: Hut1312 ::::::K::::::E:T:::D:::N::::::D:::::I::E:::::::A::::::: rrnAC0258 ::::::K:::::::::K::::::S:::T:::::::::QD::::::L::::EEQSS Hmu1189 ::::::K::::::E:::::::::N:::::::::::::S::::::SR::::E:QS: