|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1866 | HVO_0815 | Hbo0719 | HQ1568A | NP1628A | rrnAC3501 | Hut0453 | hla0491 | VNG1548 | Hmu1806 |
1449 | HVO_0815 | 1884 | 1338 | 1277 | 1249 | 1231 | 1197 | 781 | 827 | 861 |
1504 | Hbo0719 | 1338 | 2088 | 1382 | 1231 | 1277 | 1226 | 777 | 864 | 939 |
1437 | HQ1568A | 1277 | 1382 | 2027 | 1238 | 1260 | 1174 | 806 | 842 | 893 |
1464 | NP1628A | 1249 | 1231 | 1238 | 1872 | 1337 | 1338 | 819 | 847 | 895 |
1488 | rrnAC3501 | 1231 | 1277 | 1260 | 1337 | 1853 | 1376 | 834 | 884 | 888 |
1466 | Hut0453 | 1197 | 1226 | 1174 | 1338 | 1376 | 1851 | 848 | 897 | 884 |
963 | hla0491 | 781 | 777 | 806 | 819 | 834 | 848 | 1948 | 1028 | 948 |
1035 | VNG1548 | 827 | 864 | 842 | 847 | 884 | 897 | 1028 | 1978 | 1067 |
1077 | Hmu1806 | 861 | 939 | 893 | 895 | 888 | 884 | 948 | 1067 | 1949 |
300 symbols consensus ----------------------MSGVLENKRTATRFRILVEIAERQPAVSQGEIADAVGV #oth 11111111111111234342443531.32..4..2211.2...3.....1.2.1.121.1 HVO_0815 :::::::::::::::::::::::::A::D::::::::::A:::D:::::::::::E:::: Hbo0719 MAFADHGDVPGGFFIVRCLRQR:::A::D::::::L:::::::N:::::::::V:E:::: HQ1568A :::::::::::::::::::::::::A::D::::::::::::::D:::::N:::::E:::: NP1628A :::::::::::::::::::::::VD::D:::S::K::V:::::D:::::N:::::::::: rrnAC3501 :::::::::::::::::::::::VD::::::A:::::V:::::::::::::::::::::: Hut0453 :::::::::::::::::::::::ID::D:::::::::::::::::::::::::::::::: hla0491 ::::::::::::::MTDSDRATPPE::DS::D:::YQV:::::A:::::::T:::E:I:: VNG1548 ::::::::::::::MVESRANGDL:::RS::N:::YQ::::::::::::::Q::::EI:: Hmu1806 :::::::::::::::MTDGAHDGTT::QS::S::QYQ::I:::::::::::Q::::SI:I consensus TSQAVSEYIRDLVEDGFVEKEGRSRYRVTKEGVDWLFQQATDLRRFADHVTDDVLGSVQE #oth .1....2.322..232313.21.1..31.1.....11341431331222.121.112142 HVO_0815 ::::::::::::::::L:::Q:::::::::::::::::E:RA:Q:::E:::::::E::N: Hbo0719 ::::::::T:Q:::::Y:::::::::H:::::::::::E:K::::::::::::::EN::: HQ1568A :::::::::::::AE:Y:D::A::::TI::::::::::E:KG::::VN:::::::EN:K: NP1628A ::::::::::E::DE::::::A::::::::::::::::::A:VS:::E:::E:::::M:: rrnAC3501 ::::::::::E::D::L::::::::::::::::::V::S:::V::::::::::::::::: Hut0453 ::::::::::E::::::::::::::::::N:::::::GA:::V::::::::::::::::: hla0491 ::::::D:V:::::HEY::::::G::T:::::::::ISRTDS:EAYLNR:SS::::::DV VNG1548 :A::::D:LG::::E:HAR:H::G::E:::::::::IS:TD:::T:VEY:SES::EE:DV Hmu1806 ::::::N:LQ::::ND::Q:H::G::E:::::::::IT:T::::E:V:::S:::I:E:EI consensus DAAIATDDIAEGETVTLSIRDGLLHATPGDDGPATGVATTDAEAGEDVGVTGFEGVIDLD #oth 11.21443244.33.2.2342.112.3.133.4.11.1113.24.4311212.2.22231 HVO_0815 ::::V:E:V:A:D:::::L:E:::::::::::::I::::::::::GAAS::::::::EME Hbo0719 ::::::EELSS::::::TV::::::::::ES::::::::::::K::::SI:::::I:EI: HQ1568A :::::::A:EP::::::::T::::::::::A:::::::::A:DS:DE:S::::::::QM: NP1628A :::F:A::::A::::S:::S::::Y:::::S::::::::::::T:DV::::::A:I:::: rrnAC3501 ::::::A:L:::::::::LS::::::D::-G:D::::T::S:AE::V::::::::::::: Hut0453 :::::LKPVN::Q::::::A::::Q:R::-::E:::::::::::::V::::::::::::E hla0491 :::::M::::::SD:G:LM:N:V:::N:A-G:T::A:TV:A:A:::A:::AD::::V:YE VNG1548 :T:V:DA::DD::R:S::MH::VM:::::A::S::A::V:G:A::Q:::TAE:D:ML:YE Hmu1806 ET::::TA:ED:QA:S:TM:::V::::::EA:T::A::VSA::::R:::I:D:D::LEY: consensus PGSVTVLQVPPIRSGGS--VDIDALAAACADADIVAAAGVEAVVALRRADAEPDTRFAAG #oth 2.4.21323.2322243534553521354444221212.2.2323324225334252122 HVO_0815 ::::R::::::A:LAE:DA:GS:::::::D:::::V:::I:::::C:H:SVDVR:W::P: Hbo0719 ::::::V::::T:::::RA::LET::EM:D:::V:::T:I::I:S::K::V:ME:SW::: HQ1568A ::H:::I:L::A:::::QV:S::E::TI::GG:::V:T::::::::::::IT:T:SL::: NP1628A ::::::F::::::::DP::SGSPE::DTA::::V:::::::G:A:::DV::D::VT:::: rrnAC3501 ::H:S:I::::V:::PV::EN::DI::::::VP::T:::::S:::::D::I::T:H:::: Hut0453 ::E::I::::::::DED::PPL:R:TD:VET::L:::::::::G::::I:H::A:H:G:: hla0491 T:Y::::P::AVTDAA::::AP:V:T:TRPSESLL:V::T::YALAA::::H::I::GTV VNG1548 ::E::::ST:VVQD:::GALPD::VT:RL:AH::::::::::L::V:D:GS:::I::GTA Hmu1806 L:T::IVSI::::D:::SD::HA:V::EAS:H:LL:VS:T:::ATAHA::LDI:IQ::TA consensus EVAADAASRGLDVVVVATTDLVGRVTDALRDANVLYEVTEA------------------- #oth 311221.41.122412123.52342.14..253352213453442211111111111111 HVO_0815 :::::::A:::::A:::S::TA::::::::::G::F::::P::::::::::::::::::: Hbo0719 D::EA::A:::SAI::V::::::::::V:::GD::::::::ARIAE:::::::::::::: HQ1568A S::::G:T::::S:::::V::::Q:::T:::D:::::::QLADADVDPDMNANITHRDSE NP1628A :::::::G:::::::::::::A::::::::::GIA:::DDI::::::::::::::::::: rrnAC3501 ::::A:::::::A:::::Q:T:::::::::::S:D:D::Q-::::::::::::::::::: Hut0453 ::::::::::::::::::::A::::::::::SD:S:S::--::::::::::::::::::: hla0491 DAV:E::V::MN:LLIV:A:QLPKH:AR:::E:IPH::LD:GDF:::::::::::::::: VNG1548 SAVPA::::::S:LL:V:A:RLSEH::P::ER:LG:::VGPGLD:::::::::::::::: Hmu1806 AAV:E::TK::::CLL:VA:DLAGL::T::NGDAAF:IV:YDG:::::::::::::::::