|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2674 | VNG1506 | HQ1802A | hla1222 | HVO_2880 | Hbo2646 | NP4344A | rrnAC0965 | Hmu1747 | Hut0579 |
2051 | VNG1506 | 2694 | 1654 | 1846 | 1791 | 1808 | 1888 | 1861 | 1919 | 1809 |
2066 | HQ1802A | 1654 | 2643 | 1839 | 1905 | 2082 | 1811 | 1767 | 1818 | 1725 |
2180 | hla1222 | 1846 | 1839 | 2801 | 2066 | 2113 | 1868 | 1873 | 1905 | 1886 |
2196 | HVO_2880 | 1791 | 1905 | 2066 | 2647 | 2136 | 1904 | 1922 | 1899 | 1885 |
2281 | Hbo2646 | 1808 | 2082 | 2113 | 2136 | 2654 | 1964 | 1940 | 1955 | 1846 |
2157 | NP4344A | 1888 | 1811 | 1868 | 1904 | 1964 | 2642 | 1999 | 2069 | 1938 |
2175 | rrnAC0965 | 1861 | 1767 | 1873 | 1922 | 1940 | 1999 | 2656 | 2116 | 1910 |
2265 | Hmu1747 | 1919 | 1818 | 1905 | 1899 | 1955 | 2069 | 2116 | 2673 | 2133 |
2105 | Hut0579 | 1809 | 1725 | 1886 | 1885 | 1846 | 1938 | 1910 | 2133 | 2679 |
379 symbols consensus --------------------MRISDRGRGEEGRERITLVPENLDDLWHLSYVLEPGDLVA #oth 11111111111111111111.115213431112.1211...21......21.1.1..2.3 VNG1506 :::::::::::::::::::::QLK::HTV:G::::::::::S:::::::A:::::::F:: HQ1802A :::::::::::::::::::::::PS:::::::K:QW::::::V:::::::H::::::R:G hla1222 MSTSTTEKTRIDTRPGRRSG:::::::Y:::::::L::::::V::::::AH::::::::E HVO_2880 ::::::::::::::::::::::::S:::::::::::::::::V::::::::::::::::S Hbo2646 ::::::::::::::::::::::::S:::::::::::::::::V:::::::H:::S::::S NP4344A :::::::::::::::::::::::V::ESA:GR:::::::::T:::::::T:::::::::: rrnAC0965 :::::::::::::::::::::Q:QSQETTA::A:::EV:::T::::::::::I::::::S Hmu1747 :::::::::::::::::::::::A::QQV:G::::L:::::T:::::::T::I::::R:: Hut0579 :::::::::::::::::::::::AE:E:V:G::::L:::::S:::::::T::I::::R:: consensus GDTTRRIQRNDDQMRDTGGEREHMWVTIEVDDVEFARFANRLRVGGEIVDCSREDQLGHH #oth ...1.....1.121..1..1..1242323.52...11.11....1.3.32.....1.241 VNG1506 :::H::::::::::::::::::::F:::D:G::::HK:S:::::S:T:E:::::::::L: HQ1802A :::::::::::ENL:::::Q:::LV:::::A:::::::::::::::::IS:::::E:::Y hla1222 :::::::::::::::::::Q:::LF::LQ::E::::::::::::S:V::G:::::::NA: HVO_2880 :::::::::D:E:::::::::::LN:::::::::::::::::::::V::S:::::::::: Hbo2646 :::::::::D:::::::::Q::::H:::S:S::::::::::::::::::::::::::::: NP4344A :::::::::D::K:::::::::P::IR:D:NN::::K:::::::::D:::::::::::F: rrnAC0965 ::::::::::::NL::K:::::P::IQ:::T:::::K:::::::::::::::::::::F: Hmu1747 :::::::::D:::L::K:::::P::IAV::T:::::K:::::::::T::::::::::DF: Hut0579 :::::::::::::::::::::::I:AALD::::::::::D::::S:V:G:::::::::Q: consensus HTLNVEEHDEITVEKHFKPDQLDRIEEAVEAAENPDVAIATVEEGEAHIHTVAQYGTEER #oth ..2..1213.2311.4222..53.212.21.1121..111.1..12.11.1.2...1112 VNG1506 :::::A:RE:LE::::WQ::::N:LN:::::TDQ::::::::::::::::V:Q:::VD:Q HQ1802A ::::::S::::I:T:K:A:::RK:::A:E:::::A:::V::I:::::::::::::::::Q hla1222 ::I::::::::::::::::::TE:L:::T::::::::::::::::A:YV:::Q::::::Y HVO_2880 :::::::RA:::I::Q::A::I::::T:EQ:::::::::::::::A:Y:::::::::::Y Hbo2646 ::::::::::V:I:::::::::::::::EQ:::::::V:::::::::::::::::::::: NP4344A ::F:::::::L::::VWQV:::E:L::::::::Q:::::::::::Q::::::::::V::: rrnAC0965 ::::::::T:L:::::L::::A::L::::::T::::::::::::::::V::::::::::: Hmu1747 ::F::::::::E:::VW::::I::V:::T::TDQ::::::::::::::V:::::::::S: Hut0579 ::I:::Q:::LD:::TW::::M:::::::::TDV:::::V::::AQ:YV:::E::::::: consensus ASITATTGKGE-YARPREELFAELADALSRMDVDAIILAGPGFTKQDALDYIQDEYPDLA #oth 212131....111212.4...311342.313211.2.........1..331132151233 VNG1506 G:F::::::::QND:G:D:::GT:::::A::QA:::::::::::::::::H:TE:::::Q HQ1802A F:R::::::::::SQ::T:::::F:A::::::::::::::::::::::EE:::SNN:EII hla1222 ::F:KP::::D::S::::::::::GE::AHL:A::V::::::::::::::::TE::R::: HVO_2880 ::::KP:::::::::::S:::D::GS:::HLE:::::::::::::N::M::FE:NF:AV: Hbo2646 F:F::P:::::::::::S::::::GK::::::::::::::::::::::R:::AENHR:VV NP4344A ::::G::::::::::S:D:::E:::AI:R:L:AE:::::::::::::::EH:E:NA:EA: rrnAC0965 :T::S::::::::::::K:::D:::SV:K:Q::::Y::::::::::::::HF:::I::I: Hmu1747 ::::S:::::D:::::::::::::S:V:R::::::Y:::::::::::::K:::::::::: Hut0579 :::AGP:::::::::::::::G::T:V:K:T:A::::::::::::::::A::E::A:AV: consensus DKI-TTVDTSAVGDRGVHEVLKRGAVDDVQEQTRIAEEAELIDELMERIATGAKAAYGPD #oth 251123...121.1............121.32..112.131..1.12412313122..21 VNG1506 ET:::M:::::::G::::::::::::E::::E::::::S::::::TTQM::DG:::::I: HQ1802A ::L::I:::A:::::::::::::::::E::T::::SA::::::::::G::::E:I:::I: hla1222 :R:::::::::A:::::::::::::::E::KE:::SK::T:::D:TAE::Q::::T:::E HVO_2880 ET:V:::::AG:::::::::::::::::::K::::::::N:::::::N:S::::::::VE Hbo2646 :::::V::::S::::::::::::::::E::T::::SK::D:::D:::G:S::E:V:::IE NP4344A E:::QV:::AS::::::::::::::::RI:TE::VSK::::::::::::GE:E:::::V: rrnAC0965 EQ:::V::::::::::::::::::::E:::Q::::::::DY:::::A::GS:SEV::::E Hmu1747 AE::::::::::::::::::::::::E::::R::::::::::::::::::::::V::::: Hut0579 :S::R:::::::::::::::::::::E::::E:::::::T::::::::::::::VS:::: consensus EVAEAAEFGAIETLLVLDERLREERAGEGDW-DVDVNDIIETVEQQGGDVTVFSHEFDPG #oth 3.11.111..113..21.22..41.42422.122..1422431.11..2.2.1.4..2.. VNG1506 ::QK:V::::V:D::I::::::L::::::::V::::::LVR:::::::S::::::::A:: HQ1802A :::K::::::VDD:::V:DQ:::::RDS::::ST::DTVLQN::::::S:::L:G::::: hla1222 D:::::::::::::::V:D:::T::Q::::::SI:::EV::S::::::::V:::S::A:: HVO_2880 Q:::::::::V:H::L::S:::A::Q:D::::::::::::DS:::K::E:::::A::Q:: Hbo2646 ::::::::::V::::::::::::::Q:A:E:::::::EV:Q:::R:::::A:::S::::: NP4344A :::::::::::::::I::::::::::::::::A::::::::N::::::E:V::::::::: rrnAC0965 :::K::DY::::::::::::::L::::::::::I::DQ::::T::K::::::::A::A:: Hmu1747 A:::::::::::E::::::::::::GE:SE::::::DE:VT:T::K:::::::::::::: Hut0579 A::::::Y::::H::::::P::RA:DEGDN:::I::DRV::RT:::::E:::::R::::: consensus QQLRNLGGIAALLRYRLQ- #oth 21.3....11.2.....31 VNG1506 E::::::::G:V:::::D: HQ1802A :R::::::::::::::::: hla1222 E::S:::::::I::::::: HVO_2880 E::K:::::::V::::::: Hbo2646 R::K:::::::I::::::: NP4344A :::A:::::::::::::S: rrnAC0965 :::S::::V::::::::D: Hmu1747 ::::::::V:::::::::: Hut0579 :::S:::::::::::::ES