|
Pairwise sequence scores | ||||||
---|---|---|---|---|---|---|
Consensus score | 3850 | rrnAC3411 | NP2420A | VNG1880 | Hbo2270 | hla1678 |
2483 | rrnAC3411 | 3769 | 2076 | 1904 | 2018 | 2057 |
2769 | NP2420A | 2076 | 3788 | 2087 | 2171 | 2194 |
2819 | VNG1880 | 1904 | 2087 | 3796 | 2287 | 2277 |
2902 | Hbo2270 | 2018 | 2171 | 2287 | 3972 | 2508 |
2917 | hla1678 | 2057 | 2194 | 2277 | 2508 | 4122 |
547 symbols consensus --------MTDAADRIFENGEVHTLTD----PDETHEAVAVRDGRIVRLGRDYEVAFLAG #oth 1111111111311.1214121113.3311113.2321.1.11..2112114221241142 rrnAC3411 ::::::::---MV::V:T:C::RP:S-::::G:DPAS::::T::TVTAV:DPD:---:LT NP2420A ::::::::::R::::::::A:::S:GE::::S::I:::::::::::::V:S::::E::R: VNG1880 ::::::::::A:::L:LY::D::V:::TATPA:PA:S:::I::::::G:SN::DA::R:D Hbo2270 ::::::::::::::LVLLD::I:::::::::::::Y::M:::::::::::ES:D:Q::V: hla1678 MLPAPDSA:::::::L:V:::I:::AT:::::::::::::::::AV:::::SH::R::E: consensus TDTETVDLDGRVLLPGFVDAHTHLDIVGRRLVHADLSGADGPDAAVDRLAERARGDDAG- #oth 211221.13.4.11...1......331.132.2...321221331311.32112232322 rrnAC3411 AGA::::CR:G:::::::::::::::::::A:E:::A::::::NCI:::LAADD:EG--: NP2420A V::DV::C::N::::::I::::::E:L:::::R:::D-TGTRT::L:::H:A:D::::-: VNG1880 :G:RE:::G:::VV::::::::::AVL:KHG:::::R:::S:A::TA:::::::ET:::: Hbo2270 :::::I::A:D:V::::I:::::::M:::S:::::::::S:::DC::::--:::::ELAS hla1678 V:::VI::::C:::::::::::::TT:::Y:::::::V::S:ME:::L:::::AAVED:N consensus --------------WVLGYGYDESDWDDARLLQRADLDAVSTDRPVAAFREDMHTASVNG #oth 22222212212222.1..1...1.2.12412.2212..2..121..1.3...2.1122.2 rrnAC3411 ::::::::::::::::::F::::::::GE-:::A:T::R:::::::::A:::I::V:::H NP2420A ::::::::::::::::::::::::::::G::::::E::S:::::::V:::::L::::A:S VNG1880 ::::::::::::::::::F:::D:Q:SA:--:ST:::::::EA:::::I:::::::T::: Hbo2270 ISDAGNGNEDDTDE:I::::::::T:::S:Y:T:E::::::::Q::::::::::V::L:S hla1678 SDASDGGSDDPATD::::::::::T:::D:Y:T:E:::R:::E:::::V:::::V:A::: consensus VALARHGDAL---PDADVRTED-GEPTGVIVEEAAEAVYDAIAPDRAQTRDLLTAAQDDA #oth 1112333121111.222.33321.211.122.3.213222123.1423.24123..2331 rrnAC3411 A::DTL--D::::::DG:::::::A::::L::::::::F::::::YT::QEY:L:::EV: NP2420A :VFE:Y::E:::::E:G:ERT::::::::VR:A:::RLRRET:::::E::Q:V:::R::: VNG1880 ::::E:::EM::::A:::----:::D-:R:::D:V::::::TD::L:G::P:IE:::RE: Hbo2270 ::::K:R::M:::::::::A:G::N:::::::::VDV::EE:Q::EE::EK::R:::AA: hla1678 :V:D:FA:::DSV::ET:P:D:A::::::LL:S:IDPI:E:VE:GP:A::::V:::L::C consensus NERGVTGVHDMVRASHAPRVYRDLDAADELSLRVRLNYWADHLDAVRETGLVTNHGSDMV #oth 321.1.11.1.1.4.11.2...2113212.22...11..1....12313..2112.1221 rrnAC3411 LSK:I:A::::::Q:::::::::::NE:T::::::::::::::::I::L:::::::::R: NP2420A H::::::::E:::::E::A:::TMARDG::G:::::Y:::::::::E:::::ADC:::L: VNG1880 ::::::A::E:::D::::::::E::::G:::V::::::::::::::L:::::::::GG:: Hbo2270 :::::::::::T:T::K:S:::E::K::D:T::::I::::::::S:IDA::R:::::E:: hla1678 AAK:I::F:::::N::::::::::::::::TA:::I:::S:::::L::V::T::A::::A consensus EVGAIKAYTDGSLGGRTARLSEPYADADGETGQWVVDPDALAELVARADDAGLQFAAHAI #oth 31.1..212...1.11..1.11..1.22212.2.21..22.112122112211.231... rrnAC3411 QT::::::I:::::AG::::RT::::S:S-A:E:RT:::::R:::SAV:::::::::::: NP2420A :::G::::A:::::A::::::::::::::-R:E:LT::ER:R::A::V::L:::::V::: VNG1880 T::G::T:::::::::::K::::::::P::::::::::S:::A::E::::::::VV:::: Hbo2270 R:::::TF::::F:::::K:::::S:DET:::T:::::EE:::I:S:::AHD::LS:::: hla1678 :T::::S:::::F::::::::::::::P:::::::::::E:::T::D:TG::Y::T:::: consensus GDEAVDAVLDAYED----NAGDRRHRIEHAELADDDAIERLADSGVVASVQPNFLKWAGA #oth ..1.12.1.1.212112322333...1..1.1131112213.2323.1.2....11..32 rrnAC3411 ::A:I::L:S:I:S:::V::A:E:::V::::VLTG:LV::::A:PL:V:A::::HR::AP NP2420A :::::G:::S:LP:::::-DS:::::::::::LPGA:----::FDA:::M:::::R::R: VNG1880 ::A:::::::::::::::-::E:::::::::::S::::::M::L:::::::::::::::S Hbo2270 :::::H::::::::::CE:PEKS:::V:::::::::::R:F:E::I::::::::::::E: hla1678 ::::I::::::::EESHTDP:AA::::::V:::::A::::::ET:::::::::::::::: consensus GGLYAARLG-ERRAATNRFADLLDAGVPLAFGSDCMPLDPLLGVHQAVTAPADAQRLTVT #oth 11..23...31.23421.111222.1131.....1..12..2.122..1..122...2.1 rrnAC3411 :D::DE:::::::GL::::R::V:::AQ::::::::::S::Y:AQ::::::EPS:::::G NP2420A :::::::::A::A:TVD::::::A::::V::::::::::::Y::E::::::E:S:::::: VNG1880 :::::D:::TA::E:S:::::M:::::DV:::::::::A::V:::H:::::::::::S:: Hbo2270 ::::D::::::::TK:::Y:AFTE:D:::::::::::::::::::W::N:::EE:::G:: hla1678 D:::EG:::P::T:E:::YR:M:::::H::::::G::M:::::::H::N:::P::::::: consensus EALRAYTSGAAYAGFDEDRLGTIEPGKRADLAVLDASPWE-DSDAIAD-IDVSMTVVDGD #oth 2......2.1.1..21..12.1123.24..122.31...114312.21111.21.112.3 rrnAC3411 K::::::::::::::::::M::VT::SV::F:::S:::::VPNGK:S:::::T:::SA:: NP2420A :::::::T::::::H:::::::::V::::::VL:EE:::AV:D:::::::::T::::::: VNG1880 A::::::::G:R::CR::EQ:V:RE:AL:::T:::::::::HA:::::EVG::::::::A Hbo2270 :::::::T::::::::::::::::T::K:::TI:A::::::-::S:R::::::A:I:G:Q hla1678 :::::::R::::::::::::::V::::C::F::::::::::E::::RG:V::A::::::E consensus VVYDGR- #oth 1.11332 rrnAC3411 I:F:SGD NP2420A :::RP-: VNG1880 ::::::: Hbo2270 ::::RDV hla1678 :::::::