| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2592 | VNG2210 | hla1185 | HQ1047A | HVO_2952 | Hbo1584 | NP0444A | Hut2371 | Hmu3195 | rrnAC2964 |
| 1624 | VNG2210 | 2649 | 1471 | 1163 | 1446 | 1315 | 1310 | 1314 | 1297 | 1328 |
| 1692 | hla1185 | 1471 | 3518 | 1276 | 1442 | 1494 | 1316 | 1352 | 1326 | 1386 |
| 1681 | HQ1047A | 1163 | 1276 | 3090 | 1588 | 1674 | 1315 | 1320 | 1235 | 1365 |
| 1918 | HVO_2952 | 1446 | 1442 | 1588 | 2593 | 1789 | 1488 | 1384 | 1444 | 1485 |
| 1946 | Hbo1584 | 1315 | 1494 | 1674 | 1789 | 2674 | 1476 | 1492 | 1506 | 1545 |
| 1855 | NP0444A | 1310 | 1316 | 1315 | 1488 | 1476 | 2553 | 1510 | 1505 | 1567 |
| 1834 | Hut2371 | 1314 | 1352 | 1320 | 1384 | 1492 | 1510 | 2626 | 1624 | 1751 |
| 1841 | Hmu3195 | 1297 | 1326 | 1235 | 1444 | 1506 | 1505 | 1624 | 2572 | 1753 |
| 1959 | rrnAC2964 | 1328 | 1386 | 1365 | 1485 | 1545 | 1567 | 1751 | 1753 | 2539 |
525 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111122 VNG2210 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1185 MPRPASRFSAARTVSRRPAVSFIRSVPATRPLPLPAIGGARAAAEPAIRPPPTATPLPRP HQ1047A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2952 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1584 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::MS NP0444A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut2371 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu3195 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2964 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -------MEGTLEDDVVRVGGDARQRFYDSRGYGRPLDGNDLELAPVEAAHLLYRGDLDG #oth 21222221324.4113.34263111111.12...324225523112..1.1..3.1.225 VNG2210 ::::::::D:D:RG:T:HI::::::::H:A::::Y::G:::IAVSL:::::::F:::::S hla1185 NPSMDMQPT:H:RG:A:H:A:::::::H::N::::::G::EIA:SR::T::::F::::S: HQ1047A ::::::::::::V:GT:Q::A::K:::H:A:::::MR:STIV:::::::::::A::::ET HVO_2952 ::::::::Q:R:::G::HLP:::::::H::::::::TG:D:::V:::::::::S:D:I:: Hbo1584 SPGAFSN:DA::H:::::::D:::::::::::::::::::R::::::::::::S:::::D NP0444A ::::::::::H:S:GL:E::PNG:E:Y:::S:::::-::AGVR:::::::Y::A:::::A Hut2371 :::::::::LV::G::::G:SE::E:::::::::HV-::GG:A:S::::::::::::VEH Hmu3195 ::::::::DA::S:G:::A:KQ::EQ::::S:::::V:AGK::::::::::::::::::: rrnAC2964 :::::::::L:::G::::A:YE::E:::::::::KVRN:-:ID::::::::::::::IES consensus V------DG---------------------------------MGFRAFLASTAAA----E #oth 133332322111111111111111111111111111111111221231154354411113 VNG2210 :::::::::::::::::::::::::::::::::::::::::::::::::TDRE:G:::FA hla1185 :SLTPDA:P:::::::::::::::::::::::::::::::::V::ER:FVES:::ADRFA HQ1047A :IIDASSCAGETVSVDDINTTPHIGASDTSGPHSADDSSTYHV:::G:::Y:D::::::- HVO_2952 ::::::::::::::::::::::::::::::::::::::::::::L:EL::R:GTT::::- Hbo1584 I::::::::::::::::::::::::::::::::::::::::::E::E:::E:G::::::- NP0444A ::::::::::::::::::::::::::::::::::::::::::::LE::::D:PDL::::V Hut2371 IRDGRSDEA:::::::::::::::::::::::::::::::::LD:Q:L:S:A:VS::::: Hmu3195 ::::::::::::::::::::::::::::::::::::::::::::L:EL:N:ALLS::::: rrnAC2964 I::::::::::::::::::::::::::::::::::::::::::D::G::G:A:VS::::: consensus VDFLVYKDLRDRGFYLSPAREGW----VDDAAG--IDFVVYPRGKGPWDGDVAYRVRVVG #oth 4423..3...1....22.112311111133242115..2121..5114124.21211212 VNG2210 AR::::V:::::::::V:D:DP:::::WR:PGD::G::::F:::NTRR::V:KH:::::D hla1185 :RY:::A::::::::::::::P:PGGD::APDA::V:::A:E::ST:DT:::K:P:Q::: HQ1047A RQ:A::::::::::::::::SS:PG::::P:V:NQ:::I:::::M::H:DE::HQI::I: HVO_2952 L::V:::::::::::::::::::PG:::A:::D::A::L:::::::::::E:EH:::::: Hbo1584 LA:V:::::::::::::::::E:PG:::S::D:::::::::::::::T::::E::I::I: NP0444A :P::::R:::E::::V:::L::::::::A:H:::::::::H:::D:::::T::::::::D Hut2371 I:V::::::::::::::::::::::::::GPS:::T::::::::Q::::D:::::I:AIS Hmu3195 :::F:::::::::::C::::SER:::::A:PD:::C:::::::::::::DA::H:I:::S rrnAC2964 :::A::::::::::::T::::::::::::::::::A:::::::::::::NE::::::II: consensus ERETVPAASLGDVVLAVVDEESEITYFDTD-----------RPDVTGTSDLD-------- #oth ..3334334.2332..1...11221.1226211111111114433513446411111111 VNG2210 ::T:L:VDG:SES:::::::::::::L:IA:::::::::::PETP::ETT:::::::::: hla1185 :::SL:::G:AGRT::::::::D::::AAT::::::::::::GEIA:AT:YE:::::::: HQ1047A :::::SMSA:::::::::::DG:L:::E:NSNSAFHEVISHDE:N:DSK:I:LSEINDNQ HVO_2952 :::SI:VS:::E::::I:::DGDL:::::E:::::::::::GD:PE::AAE::::::::: Hbo1584 :::R:A::::::::::::::DGDL::::::D::::::::::D:::G::D:YI:::::::: NP0444A ::GS:RLD:::::::::::::::L::LE:::::::::::::::A:D:::G:E:::::::: Hut2371 ::TA:S::T:::S:::::::::A:::LE:S:::::::::::H::IA:S:TT::::::::: Hmu3195 ::::::::D::ACA::::::::::S::E:H:::::::::::::::::::RSS:::::::: rrnAC2964 ::D:AV:TD::GC::::::::::V::L:::::::::::::::RE:S::::AA:::::::: consensus -------LPADLDGDLLSDRVVCWDPPDELYEAGFYGQRL-GRNAD-DGPLQLSLVEAAY #oth 1111111415333121151.11221324411442.1..2141244216312.1..2.1.3 VNG2210 :::::::R:T:VP:V::D:::LV:E::QR:HN::::::P:G::A:::HDA:::::::::: hla1185 :::::::P:DQ:::V:::::::V::A:EG:::R:::::P:T::A:AVE:AV::::::::S HQ1047A TIQDQSS:::::SA:VIH:::::Y:AT:S::DEN::::::F::::::T::I:F::I:::: HVO_2952 :::::::::::::AE:::::ALV::GV:R::QR::F::::Y::::::S:::::::L:::: Hbo1584 :::::::P:EG::A:::::::::YES:::V::N:::::::F::::E:E:::::::I:G:: NP0444A :::::::ADLTA::V::E:::L:::A:PA:::Q::::::M:--DRE:::::::::L:::H Hut2371 :::::::::SGVAA:::G:::LAP:::EA::FE:::::P::-DDEA:GE::::::I:::A Hmu3195 :::::::V:ET-:::::A:::::::::A:::::A::::P::-DEQ::AQAI::::::::: rrnAC2964 :::::::V::T-A:E::GE:::::E::A::::QA::::Q::---G::::AV::::::::: consensus LAAAGVLAV------------------DGGAAAVVARGRDVEGERFDRRLAVYAALREAG #oth .2551315211111111111111111122452313231.32..11..1..31.42..342 VNG2210 :ID::::RL:::::::::::::::::T:ATIDD:R::::LG:::H::C:::::R:::D:: hla1185 :::D:::SLSTSVGTAGESPSEGAAET::PV::::::::::::::::::::::KR::A:D HQ1047A ::QQ::I:::::::::::::::::::::--T:TI::I:::::::::::::R::::::NHD HVO_2952 ::R:DA::I:::::::::::::::::::--E:D::S:::::::D:::::::::::::::K Hbo1584 ::RR::ID::::::::::::::::::::--DEE:::LA:::::D::::::KT:::::D:: NP0444A :::T:::S:::::::::::::::::::A::::::E:::::A:::::::::T::RT:::R: Hut2371 ::SQ:::D:::::::::::::::::::E:::D:I:EC::E:::::::::::::R::::R: Hmu3195 ::GT:T:H:::::::::::::::::::E:D:D::IE:::A:::D:::::::::ER:::Q: rrnAC2964 :TQE:M:T:::::::::::::::::::E:::D:::E:::E:::D:::::::::T:::AS: consensus VVPKTGFKFGADFRTYADVESVDDLGHSELLVRVLPADHAFSPRDLSLDVRLAHGVRKRM #oth 31..1.1...1...1.43122233.3..23.1.145422425.1111..1...1....2. VNG2210 A:::::::::::::V:SA:S::::::::::::::ITDT:V:::G:::::::::::::::: hla1185 A:::::::::::::::L:::T:E::P:::H::::VEG::R::::E::::::::G::::E: HQ1047A T:::S:::::::::V:RTFDGI:S:D::TD:I::CQT:MKIY:::::::I:::G:::::: HVO_2952 T:::S:::::S:::V:TEF::::::S:::F::::VAP::T:V:::::::::::G:::::: Hbo1584 S:::S:::::::::V:T:F:T:SS:S::AD::::VTP::::F:::::::::::G:::::: NP0444A :::::::::::::::::::D::SE::::::::::::::ATL::::VA::::::::::::: Hut2371 ::::::Y::::::::::::::::S:::::::::::::::::T::::A::::::::::::: Hmu3195 :A::::::::::::::::::::A::::::::::AFD:G:V:E::::A:::::::::::T: rrnAC2964 :A:::::::::::::::::::AEN:::::::::::::::R:E::::A:::::::::::T: consensus VFALT-----DG-------------------DDEIDWLSVSRLTP #oth 11.211222423111111111111111111124413.1213...1 VNG2210 :::A:::::D:T:::::::::::::::::::::T:R::::::::: hla1185 ::::::MVEG::SGAGGDGGDDETAENGAVR:ADVE:::IG:::: HQ1047A ::::::::::PA:::::::::::::::::::NGD:H::::A:::L HVO_2952 :::::::::::D:::::::::::::::::::NG:::::::::::: Hbo1584 :::::::::::A:::::::::::::::::::N:G::::::A:::: NP0444A ::::V::::::D:::::::::::::::::::G:::R:V::::::: Hut2371 ::::VAEADA::::::::::::::::::::::PR:E::E:G:::: Hmu3195 AY:FV:::::-:::::::::::::::::::::EG::::A:E:::: rrnAC2964 :::::::::T:::::::::::::::::::::G:::E:VA:E::::