|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1806 | HQ1272A | hla2151 | VNG0250 | Hbo0861 | HVO_0674 | NP0848A | Hmu0644 | rrnAC1793 | Hut0377 |
1304 | HQ1272A | 1970 | 1220 | 1209 | 1263 | 1215 | 1246 | 1186 | 1234 | 1202 |
1433 | hla2151 | 1220 | 1980 | 1259 | 1347 | 1286 | 1292 | 1295 | 1334 | 1285 |
1384 | VNG0250 | 1209 | 1259 | 1826 | 1309 | 1212 | 1352 | 1304 | 1267 | 1298 |
1540 | Hbo0861 | 1263 | 1347 | 1309 | 1808 | 1440 | 1327 | 1384 | 1358 | 1384 |
1502 | HVO_0674 | 1215 | 1286 | 1212 | 1440 | 1837 | 1362 | 1287 | 1354 | 1379 |
1512 | NP0848A | 1246 | 1292 | 1352 | 1327 | 1362 | 1797 | 1398 | 1364 | 1374 |
1522 | Hmu0644 | 1186 | 1295 | 1304 | 1384 | 1287 | 1398 | 1795 | 1439 | 1398 |
1507 | rrnAC1793 | 1234 | 1334 | 1267 | 1358 | 1354 | 1364 | 1439 | 1831 | 1438 |
1520 | Hut0377 | 1202 | 1285 | 1298 | 1384 | 1379 | 1374 | 1398 | 1438 | 1824 |
287 symbols consensus ------------------MSEIEIPESHPRYESLLTRHRIEEGVEKGITSRQGLIAQGRG #oth 111111111111111112333312.11...14..2......3..14....3.....1... HQ1272A MNDSSPTQDPEKETETETET:T:::QD::::Q::I:::::::::DT::::P:::::E::: hla2151 :::::::::::::::::::T:T::::D::::A:::::::::A::::::::K::::::::: VNG0250 ::::::::::::::::::--MT::::D:::HD::V::::::D::DD:::::::::::::: Hbo0861 ::::::::::::::::::::D::::::::::L::::::::::::::::::K:::::E::: HVO_0674 ::::::::::::::::::::D::::::::::Q:::::::::::::::::::::::::::: NP0848A :::::::::::::::::::TGPD:::::::::::::::::::::DL:::::::::::::: Hmu0644 ::::::::::::::::::::::DV:::::::::::::::::D:::T::::K::::::::: rrnAC1793 :::::::::::::::::MSEDVDL:::::::::::::::::A::DR:::::::::::::: Hut0377 :::::::::::::::::::::VDV:::::::::::::::::T::::::::Q::::::::: consensus EAFDYLLGERTIPSADAAERAAAAHLLLADHPVLSVNGNVAALVPGEMVELAEATGADLE #oth ..1......2.241113.2.11..3..5.211.2.1...1...2.214.3..1112..11 HQ1272A :::::::::K:TS:::D:A:::::L::H:E:::I:::::::::::EAI:::::VVE::I: hla2151 :::::::::::L::::::::::::T::R:N:::::::::::::A:::T::::::V:::I: VNG0250 ::Y::::::E::::::::::::::Q::T:::::V:::::::::::DAL:A::A::::::A Hbo0861 :::::::::E:TA:::::::::::Q::::E::::::::::::::::::::::::VD:::: HVO_0674 :::::::::::L::S:E:T:::::::::::Q::I:::::::::C:::V:D::A:VD::I: NP0848A :::::::::E::::::D:A::::::::S::Q::::::::::::A:::::A::A:::::I: Hmu0644 :::::::::::TDT:A:::::::::::Q:::A:::I:::::::::::::T:::::::::: rrnAC1793 ::::::::::::D:::D::::::::::S:::A:V:::::A:::::::L:::::V:::::: Hut0377 ::::::::::::E:::R:::VG:::::::::::::::::::::::::V::::AV:::::: consensus VNLFNRTEERMEAIADHLREHGAEDVKGLTADGRIPGLDHERAKVDADGIGAADVVLVPL #oth .....1.23.221..11.11...53.1.131.22..11..1.11..1...23..1.1... HQ1272A ::::::::K::N::::::YD:::QT::::K::DQ::::::::GT:::::::::::::::: hla2151 :::::H:D::VRR::::::::::D:::::A:::D::::::A:GT::::::E:::::V::: VNG0250 ::::::::::V:R::::::::::SG:L:TK::A::::::::::T::S:::YD:::::::: Hbo0861 :::::::::::R::::::::::::::::::::::::N::::::::::::::::::::::: HVO_0674 :::::::D:::R:::A:::D:::DE:::::G::::::I:::::::::::::S::::V::: NP0848A ::::::::A:::R:::::::::::E::::N:::::::::::::T:::::::S:::::::: Hmu0644 :::::::AA:::R:::::::::::::L::::::::::::::::::::::::D:::::::: rrnAC1793 ::::::::::I:::::Y::::::T:::::::::::::::::::::::::::::::::::: Hut0377 ::::::::Q:I::::::::::::NE:::::::A:::::::::::::::::YN::T:V::: consensus EDGDRAEALAAMGKTEIVIDLNPLSRSAQVAAVPIIDNIIRAVPNITAHARDLAG--ADA #oth ......1..2211.2.1.1....3...133.31..1..23..1.1212..23.5311345 HQ1272A ::::::A::D:V::R:::::::::::::LA:T::::::V::::::::E::SA:KQ::::N hla2151 :::::::::D:::::::::::::G:::PRT:DI:::::L::::::V::::::::D:::SS VNG0250 ::::::A:::E:::::L::::::::::::A:S::::::VV:::::::::::::SE:::EN Hbo0861 ::::::::::::::V:::V::::M:::::S::I::V:::::::::V:D:::::TD:::TE HVO_0674 :::::::::G::D:V:::V::::M:::::::T:::V:::M::::::A::::::R:SG:TR NP0848A ::::::A:::E:::::L::::::M:::::S:::::V::L::::::M::::EA:::::E:: Hmu0644 ::::::::::D:::::L:V::::::::::T:::::V::::::::AM:E:::E:::::DE- rrnAC1793 :::::::::GE:::::L::::::R::::E::T::::::::::I::::E:::::R:::DP- Hut0377 :::::::::GE:::::::::::::::::::::::::::VL:::::M:::::S:QD::TP: consensus AALEDIIDDFDADAALRAAERAIRDGEL------------------- #oth 422353154.12231163..43..51445331111111111111111 HQ1272A V::TTV:NR::::EVRER::QE::R:::RSS:::::::::::::::: hla2151 ::RR:A::S:A:::::AD::AT::E:AFATPDDEIPGEETPGDTPPR VNG0250 ::R:EC:QE::RE:::::::ER::G:MSGGA:::::::::::::::: Hbo0861 EER:K:VRE::RE::::E::D:::S:::D:::::::::::::::::: HVO_0674 EE::T:VA::::::::D:::::::A:DE::::::::::::::::::: NP0848A ST::N:::::::::::S:::ER:::I--::::::::::::::::::: Hmu0644 ::QREA:ES:::AE::S:::::::::::::::::::::::::::::: rrnAC1793 D:QQ:A::T::::S::TD:::T::E:D:E:::::::::::::::::: Hut0377 D::QQ:V::::PAQ::G:::E:::S:::E::::::::::::::::::