| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2568 | HQ2300A | hla0028 | NP2712A | rrnAC0933 | Hmu1055 | VNG0674 | HVO_0831 | Hbo0703 |
| 1864 | HQ2300A | 3111 | 1586 | 1673 | 1577 | 1567 | 1542 | 1642 | 1607 |
| 1975 | hla0028 | 1586 | 2807 | 1644 | 1607 | 1631 | 1571 | 1733 | 1780 |
| 2016 | NP2712A | 1673 | 1644 | 2626 | 1811 | 1794 | 1680 | 1731 | 1788 |
| 1971 | rrnAC0933 | 1577 | 1607 | 1811 | 2612 | 1848 | 1654 | 1728 | 1749 |
| 1920 | Hmu1055 | 1567 | 1631 | 1794 | 1848 | 2403 | 1624 | 1722 | 1655 |
| 1851 | VNG0674 | 1542 | 1571 | 1680 | 1654 | 1624 | 2392 | 1601 | 1689 |
| 2025 | HVO_0831 | 1642 | 1733 | 1731 | 1728 | 1722 | 1601 | 2760 | 1932 |
| 2093 | Hbo0703 | 1607 | 1780 | 1788 | 1749 | 1655 | 1689 | 1932 | 2772 |
430 symbols consensus ----------ASDSDLVEDLLAGKHRALARVITKIENRSPGYRDIVSALHAHTGNADVIG #oth 122223344635444.223..2.2.1....2.12..2134..131114.15...5.2.1. HQ2300A ::::::MSMN:::ES:L:S::::E::::::T:S:::::ET::QSL::::YS::::::::: hla0028 MGGSDAPALSD::AK::::::::S:::::::::R::::AA:::G::A:::E:::G::::: NP2712A :::::::::MSD:ET:I:E:::::::::::::::::D:::::::L::S::::::::E::: rrnAC0933 ::::::::::--M::::A:::::::S:::::::L:::::S:::E:I:D::Q:::T::::: Hmu1055 ::::::::::--M::::::::::E::::::::S:::D::::::E:::E::R:::S::::: VNG0674 ::::::::MP:NQP:::A::::::::::::A:::::D:ND:::::::::YP:::Q::::: HVO_0831 :::::VTMSR:VE:::::R::D:E::::::A:::::SQ:::::::::E::::::D:S:V: Hbo0703 MSHAEDTTRE:RNDE::S:::S::::::::A:::::::::::::L::R::::::D::::: consensus ITGSPGAGKSTLVDKLAAAYRERGETVGVIAIDPSSPFTGGAVLGDRIRMASNVGDMDVF #oth 1..1..1........2.33..2213...1111.....11...........1.111...1. HQ2300A :::::::::::::::::E:::A:D::::I:::::::::::::::::::::::T::::::: hla0028 :::A:::::::::::::::::D::D::::V:V:::::Y:::::::::::::::::::::: NP2712A :::::::::::::::M::T::::::::::::::::::::::::::::::::::::::::: rrnAC0933 V::::::::::::::V::T:::Q:Q:::::::::::::S::::::::::::::A::::M: Hmu1055 V::::::::::::::V::T:::::::::::::::::::::::::::::::G::A:::::: VNG0674 ::::::S::::::::::SQ:::::L::::::V::::::::::::::::::::TAT::::: HVO_0831 :::::::::::::::::KY::DQ::::::::V:::::Y:::::::::::::::::::::: Hbo0703 :::::::::::::::::K:::DD:L:::::GV:::::Y:::::::::::::::::::::: consensus FRSMSARGSLGGLSTATADAVKALDAFGKDKIIIETVGAGQNEVDIVRTADTVAVLVPPG #oth 1.......2.....1..2...1.1......21.1.........111.2.....2...1.2 HQ2300A V:::::::A::::::::::::::M:::::::::::::::::::I:::Q:::::::::::: hla0028 ::::::::Q:::::M:::::::::::::::VV:::::::::::::V:::::::::::Q:: NP2712A :::::::::::::::::T:::::::::::::::V:::::::::IEV:K:::::::::::: rrnAC0933 :::::::::::::::::T:::T:::::::::::V:::::::::::::::::::::::::: Hmu1055 :::::::::::::::::T:::T::::::::RV:::::::::::I:::::::::::::::D VNG0674 :::::::::::::::::::::::::::::::V:::::::::::::::K:::::::::::S HVO_0831 ::::::::Q:::::::::::::::::::::R::::::::::::::V:K:::::V:::Q:: Hbo0703 ::::::::Q::::::::S:::::::::::::::V:::::::::::::::::::T:::Q:: consensus SGDDVQMLKAGILEIGDVFVVNKADLDGANRTVAELREMLHLRD-P-A-LDT-GHHGADT #oth ......1........1.1.2.....21.131.131.31.234244355631311221355 HQ2300A ::::::T::::::::A:::I:::::R:::D:::Q:::::V::GEGKQTSR::S::::VMS hla0028 ::::::T::::::::::::::::::M:::E::L:::E::V:R:AS:TKG::G:::::FEV NP2712A :::::::::::::::A:::::::::::::D:::M:::::VEM::NSPMA---:::::::: rrnAC0933 :::::::::::::::::::::::::::::D:::QQ:::::QGQS:-:GRP:S::::::TE Hmu1055 :::::::::::::::A:L:A:::::::::::::QQ:K::::YGQ:-:-:---::RA:--- VNG0674 ::::::::::::::::::::::::::::::K::T:::N::D::::-:-:---:------- HVO_0831 :::::::::::::::::::::::::ME::S::::::Q::I::::D:R:N:::::::::AA Hbo0703 :::::::::::::::::::::::::M::V:::::::E::I::::N:G:K::::::::V:: consensus -DG-----------------GGGGD--------------D-----------GPDDDADD- #oth 645111111111111111114435443121333222221211111111111533343135 HQ2300A TS:SSTMDTNGQNNHSGTTV:A:M:GGGHAQTESKSKSA:LATHQTDTSNTT:EENNHET hla0028 P:H:::::::::::::::::PDD:EG::::::::::::::::::::::::::D:GGG::E NP2712A I:I::::::::::::::::::::T:::::::::::::::-:::::::::::D::G:::G: rrnAC0933 LA::::::::::::::::::DH:DAST::::::::::::::::::::::::AA::E::ES Hmu1055 :--:::::::::::::::::-----::::::::::::::-:::::::::::---S::::: VNG0674 :--:::::::::::::::::-----::::::::::::::-:::::::::::-::::T:-: HVO_0831 F:D::::::::::::::::::H::GHGGHADASDAESDAE::::::::::::DPSN::EP Hbo0703 SLP:::::::::::::::::A:VSEANGQANGTDA::::::::::::::::E:::A:::D consensus ---WEPPIVETVATTGEGVEELLETLDAHAAYLDESGEREEKARKRYAEEIRTLLRADAN #oth 542.413131.1.43.3.1322333223.533.331.43352515.211.1.211.4.32 HQ2300A VSP:SK::I:::::E:S:I:TVI:EFAE:RT::KH:::KA:QT:Q:::::::::::G:I: hla0028 ATE:T:EVLR:::N:::::S::I::F:::::H:H:::AI:STK:R:::::::::V:S:VG NP2712A :::::::::::::KS:D::::F:GV:AD:VEW:K:T:::QTQVE::::A:::::::E:TA rrnAC0933 ET::N::::::::NR:::::DF:DA:AN:G::::RT:R::GQ::E:F:A:::::::E::: Hmu1055 :::::::VI::I:DS::::::FMAAV:D:LD:::A::Q::A:Q:S:::A:::A:V:::T: VNG0674 ::::S:E:T::::ER:T::TD::DVF:::TTW:::::R:T::R:T:::::L::::::::: HVO_0831 LV::T:QVL:::::::::ID::V::::D:RD:::A:::LA::::::AG::::QH::S:V: Hbo0703 PE::K:A:::::::::D::D::V:::G:::EF:T:::M::Q:::T:::::::Q:::N::: consensus ELLEAELDRRGGVDALADAVRRRETDPYTVAAEIVEPLRECLDARR----------DD-- #oth 51233113321121421341552211..32341123122211344411111111115443 HQ2300A Q:I:TR:NATSS::V::E::::G::::::IMN:::NSVEP:::KQAFEGVSDLTHYT:QI hla0028 A:AT::IE::::I:::::S:::::::::SL:::::D:IA::VE:DG::::::::::G:DG NP2712A T:::::IEA:::L:QYVQQ:LQ:::::::::DD:::::AD:VRK::::::::::::EHED rrnAC0933 :::VD:::::::IEQYV:::IE:H::::::VD:VL::::::::E:::::::::::::GN: Hmu1055 D::::::AQ:::IE:YV:EIVA::S:::::TE:::A::::::::PS::::::::::Q::: VNG0674 :V:::::AD:::::E:VARIDSGA:T::E:::DVLD:I:DA:RED-::::::::::--:: HVO_0831 R::::::::::::EEF:Q::VEK:::::A::EDVL::::::::D:A:::::::::::-:: Hbo0703 :::KE::::H:::ES::A::AD::::::A::S:VI::::D:VTSH::::::::::::E:: consensus ---------- #oth 2332212222 HQ2300A DSDSSDSNNI hla0028 RPEPVDRDAT NP2712A DYT::::::: rrnAC0933 :::::::::: Hmu1055 :::::::::: VNG0674 :::::::::: HVO_0831 :::::::::: Hbo0703 ::::::::::