|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3436 | HQ1438A | VNG0137 | NP0320A | Hut2969 | rrnAC2298 | Hmu0096 | hla0208 | Hbo0997 | HVO_0521 |
2367 | HQ1438A | 3540 | 1994 | 1931 | 1894 | 1934 | 1956 | 1945 | 2168 | 2084 |
2414 | VNG0137 | 1994 | 3434 | 2091 | 2003 | 1958 | 2105 | 2068 | 1973 | 2047 |
2597 | NP0320A | 1931 | 2091 | 3415 | 2200 | 2098 | 2200 | 2038 | 2174 | 2187 |
2524 | Hut2969 | 1894 | 2003 | 2200 | 3418 | 2210 | 2280 | 2129 | 2109 | 2172 |
2517 | rrnAC2298 | 1934 | 1958 | 2098 | 2210 | 3552 | 2358 | 1992 | 2087 | 2134 |
2661 | Hmu0096 | 1956 | 2105 | 2200 | 2280 | 2358 | 3437 | 2197 | 2167 | 2266 |
2494 | hla0208 | 1945 | 2068 | 2038 | 2129 | 1992 | 2197 | 3546 | 2041 | 2275 |
2564 | Hbo0997 | 2168 | 1973 | 2174 | 2109 | 2087 | 2167 | 2041 | 3485 | 2410 |
2725 | HVO_0521 | 2084 | 2047 | 2187 | 2172 | 2134 | 2266 | 2275 | 2410 | 3536 |
485 symbols consensus ---------MSDDLAAVVERVRDRVDPDDAEREALQAAAAALTARAEAAIADLPVDADVV #oth 1111122234442444.2441.4.24.342.14313522451551433122322141223 HQ1438A MSKGDAKDGFESEHQM:I:QI:::I:::S:::::M:RVMSQ:RN:ITTEVESF::S:::: VNG0137 :::::::::-MT:A:::I::::Q::::TP:::R::A:::SR::E:::::::E:::A:::: NP0320A :::::::::--MS:ES:LSS:::::V:EAS:Q::::::V:K:::::::::T::::T::TR Hut2969 :::::::::::EE:SG:LRA::R::E:T:::::R:EQ::HEVIG:::::LEERGI:G::M rrnAC2298 ::::::::::::EFD:::GK::A:AS:T:D::AQ::RV:D:VM:D::::::::::E:E:: Hmu0096 ::::::::::::EVD:::::::E::T:G:D::AE:::V:DR::E:G:D:::S:::::H:: hla0208 :::::::::-M:::E::LS:::::AV:EP:::DR:RTV:VE:AD:TRE:::::::::::: Hbo0997 :::::MAESD:E::SH::A:::E:I:::E::QT::RET::T::S:V:DEL:A:S:::::L HVO_0521 ::::::::MTNS::::::AA::E:I:::E:::R::AD:::::ES:VYD:L::::::::AL consensus QVGSTARGTWLAGDRDIDLFVRFPPDLDREALEEYGLAVGHAVLPDGHEEYAEHPYVKGT #oth 2......2..31....2.2.11.14322..5..31.151.32...3.1..1.....12.3 HQ1438A ::::::::::::::::::I:::::TE:N:::::::::K::SS:::S::::::::::IT:: VNG0137 ::::::::::V:::::::::::::S::P::Q::T::TT::A::::::::::::::::T:: NP0320A L:::::::::::::::::::::::::::::R::T:::E::::::::::::F::::::::S Hut2969 L::::::N::I:::::V:V:::::TAV:::K::AV::DI::::::::::::::::::V:E rrnAC2298 ::::::::::T:::::V:V::C:::SI::::::::::::::D:::::R:::::::::V:E Hmu0096 R:::::::::T:::::L::::C:::E::::E::::::S:::::::A:::::::::::::: hla0208 :::::::D::VS:::::::::::DAA::::Q::::::::::::::::::::::::::::: Hbo0997 R::::::::::S::::::::I:::D:::::S::R::::I:N::::E:::::::::::V:E HVO_0521 :::::::::::S::::::::::::A:::::E::A:::E:::::::::::::::::::::D consensus FDGFDVDLVPCYDVADATDIQSAVDRTPFHTEYLQERLDDRLAADVRVAKAFLKGIGVYG #oth 32.12..1...21.3413313.......1.24..43111152.12.114.3.111.11.. HQ1438A :E::E:::::::::DAGSEL::::::::H:NQ:::T:I:E:I::A:::L:K::::::A:: VNG0137 :E:YA::::::::::A::E:K::::::::::T::::H:::G::::::LC:Q::::::::: NP0320A YR:::::C::::A:::::::R:::::::::::::DG:I-E:::D:::L:::::T:::::: Hut2969 V::Y::::::::::E:::A::::::::::::::::A::::D::D:::LT::::::::::: rrnAC2298 RE:YA:::::::A:EN::E::::::::::::R::::::::NS::E:::::Q::::::::: Hmu0096 V::Y:::::::::::::AS::::::::::::R::A::::ET:::::::C:Q:M:A::::: hla0208 YE:::::::::H::ET:G:LI:::::::::DA::SA:::EG::D::VL:::::::::A:: Hbo0997 :::::::::::F::D:GSSLR:::::::H:N:::TA::::E:::E:::F:R::::::A:: HVO_0521 Y:::::::::::::PS:S::R:::::::::NA::T:::::D:::::::F:R:::::DA:: consensus SDLRTRGFSGYLTELLVLEYGGFEALLEAAADWHPPVEFDPEDHGTRSFDDPLVVIDPTD #oth .1...2....1.2....21311.223241224.3.1.22..34.242311.1.1.1.... HQ1438A :::::::::::::::::I:::D:::V:K:::R:Q::::I:::A:::AAH::::I:V:::: VNG0137 :::::Q::::::C::::V:::::::M:A:IE::Q:::VI::AA:QQA::::::::V:::: NP0320A ::::::::::F::::::V::::::::V::::::Q:::RL::KS::Q:::::::::V:::: Hut2969 :::::Q:::::::::::::H:::RS:V::::E:::::R::::T:::AT:::D:::::::: rrnAC2298 :::::::::::::::::::F:::R:F:::V:::::::RL::D:::SET:::::::::::: Hmu0096 :::::E:::::::::::::HD::RP:V::::A:T:::::::A:::RE::::::::::::: hla0208 :::::E:::::::::::::L:::VP:V:S:RS::::::::::G:AE:T:::::::V:::: Hbo0997 :N:::Q::::::::::::::::::S:IC::::::::::L::::::S:::::::::::::: HVO_0521 :::::E::::::A::::VGH::::P::R:::::S:Q:::::::::::R:S:::::::::: consensus PERNVAAVCSAENVARLQHYARELLAEPRESLFEPAD--PAPLDAEAVRAHLDRRGTTPV #oth .2.....12.22121121.1..31343.2433.244311242322331253342.2.112 HQ1438A :A:::::::::T:IS:F:::::QF:E::KQTY::SPTEMA:EM:I:T::T::Q::::S:M VNG0137 ::::::::V::A:::TV::H::RFR:T:S:DA:T::S::::::::A:L:S:I:::D:::L NP0320A :::::::::::A:::::I::::D:QTD::A::::::::::E::SPA:::KRVSE:::::: Hut2969 :::::::AL:TA:L::F::::::::::::::::::V::::D:::P:::::AF:E:::::: rrnAC2298 ::::::::L:ET:::T::::::D::::::V:::TED::::C:FE:AD:E:AVSQ:::::: Hmu0096 ::::::::L:T:QL:TF:::::::A::::TD::::SE::SE:V:::T:::WFE::::::: hla0208 :T::::::L::::L::F:::::::::A:S:AP:::V::::::::PTD::D:::::E:::: Hbo0997 :T:::::::::::::::::::::::DD::VD::FGD::::E::S::D:QE:VR::::::M HVO_0521 ::::::::::::::::::::::D::SD::::::FRP::::PA:::DG::S::::::::A: consensus AVVFDAPDLVDDQLYPQLRKSLDGIRRALDRRGFDVLRSAAFADERA------------- #oth .12123..2.2.1.1...31.35.2543.333..213.3222233522233233222211 HQ1438A :L:::S::I::::::::::::VQ:::T::ETE::::I:T:::::DQ:::::::::::::: VNG0137 :::L::::V:A:::::::YR:R::VV:G:REH::::V:A::W:::::::::::::::::: NP0320A ::R:::::I:::::::::D:::N::EG::::A:::P::::R::::S:::::::::::::: Hut2969 ::T:ET::::E:D:::::E:::::::GL:::H::::::A::::G:H:::::::::::::: rrnAC2298 :LR:A:::V:::::W:::::::::LCSE::::::E:::::::VEDDSGKPETLDTESRGR Hmu0096 ::R:::::::::::W:::ER::S:VTD::N:::::::::::::::T:::::::::::::: hla0208 ::::::::::::::W::::R:::::V:G:ND:::::::AR:MT:GSGPEADGDGAKRA:: Hbo0997 ::::::::V:E:::::::Y::IA::ESE::::::API::TT::AD::::::::::::::: HVO_0521 :::::C::::::::::::::::T:VADG::::::::F:R:::::TDG:EGQGEA:::::: consensus --VLFAELAVAERPAVERHEGPPVHVREHAEGFYEAYADDSD--VYGPFIDGD-RYVVER #oth 111124.232123.1121.4...14.15..33.143.214531133..121211..1... HQ1438A :::::I::MHRHC::I:::T:::IT:::::SE::T::ET:A:::T::::::::::::::: VNG0137 :::V:V:::S::L::::::V::::S:GT:::R:::T::::DG:::::::V:D:G:::::: NP0320A :::::V:C:::::::I:H:A::::G::D::::::D::::SDA:::S:::::E:G::A::: Hut2969 ::::LF::E::::::::::V::::::::::D::::K:::-:G:::::::VSEE::::::: rrnAC2298 DV::LL:F::::Q:::::::::::::::::S::FQK:D:N:E:::A:::::::::::::: Hmu0096 ::::L:::E::::::::::::::::::D:::::::T:::-::::AT::YV:::::::::: hla0208 ::A:Y:::E:::::::T:::::::A::K::AS:::S::::V:PET::::::::::::::: Hbo0997 :::::V:::HRTL:N:A::D:::::::N::::::D::::-G:::T::::L::::::A::: HVO_0521 ::A:::::S::::::::::::::::::Q::::::G::E:RE:::H::::L:::::::::: consensus EREFTTAAAFLRSDALFDVALGAHVESALAED-YEVLVGDEVA-ALAEEFGVELAAYFDP #oth 3.343124221323333212..43113423442221111421314.244.163.36132. HQ1438A ::TW:D:::::Q:ESI:NAG:::QI:E:::DT::T:::E::II:::TS:::ES:TQ::E: VNG0137 D:DVR::GG:A:TE-:GT:::::RI::RV:SGD:D:Y:::A:VE::LP::ES:::::V:: NP0320A A:DAR:P::L::EQ-::::S::T::AD:::D::::I:S:E::::S::PS::T:::::::: Hut2969 :::YH::TEL:E:::I::::::TD:::T:ETT:HT::::AA:G:T:::S::R:::G:L:: rrnAC2298 Q:A::::TG::S:A:VY::G::QRI::::ENG:::::::TDI:::::DG:::D::S:::: Hmu0096 D:::A::S::::::::SN::::T::A:::ESE:::::::E::::P::G:::::::D:V:: hla0208 ::::::VREY:E:::AG::::::Q::REF::R:-D:::::A:::T::PA:::P:REFYE: Hbo0997 :::::D::EL::::T::T:G::S:::EQ:Q:E::::::::::G:G:::T::G:::Q:::: HVO_0521 ::::::::G::E::::::::::K::::T:R::G:D::::GD:::::::A::A::GR::A: consensus KP--- #oth 31111 HQ1438A TASGV VNG0137 :A::: NP0320A ::::: Hut2969 ::::: rrnAC2298 ::::: Hmu0096 ::::: hla0208 H:::: Hbo0997 ::::: HVO_0521 R::::