| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3327 | Hbo0928 | rrnAC1102 | NP0738A | HVO_A0487 | HQ1829A | VNG1573 | hla0302 | Hmu2011 | Hbo1612 |
| 2302 | Hbo0928 | 3373 | 2023 | 1982 | 2195 | 1884 | 2102 | 2115 | 1921 | 2024 |
| 2460 | rrnAC1102 | 2023 | 3338 | 2224 | 2161 | 2135 | 2256 | 2218 | 2246 | 2286 |
| 2521 | NP0738A | 1982 | 2224 | 3299 | 2150 | 2129 | 2255 | 2222 | 2308 | 2278 |
| 2542 | HVO_A0487 | 2195 | 2161 | 2150 | 3372 | 2108 | 2280 | 2350 | 2165 | 2248 |
| 2477 | HQ1829A | 1884 | 2135 | 2129 | 2108 | 3462 | 2215 | 2145 | 2280 | 2368 |
| 2716 | VNG1573 | 2102 | 2256 | 2255 | 2280 | 2215 | 3360 | 2326 | 2372 | 2357 |
| 2758 | hla0302 | 2115 | 2218 | 2222 | 2350 | 2145 | 2326 | 3322 | 2380 | 2375 |
| 2655 | Hmu2011 | 1921 | 2246 | 2308 | 2165 | 2280 | 2372 | 2380 | 3327 | 2432 |
| 2671 | Hbo1612 | 2024 | 2286 | 2278 | 2248 | 2368 | 2357 | 2375 | 2432 | 3317 |
467 symbols consensus ---------MRGFVLAGTASGVGKTVATLAVIRALEDAGYAVQPAKAGPDFIDPSHHEAV #oth 11222222215.3.11..3.......11..24211432.15111.............233 Hbo0928 MTDTPVPADLP:L::::::::::::::::::C::::RE:HTPVA:::::::::::::A:T rrnAC1102 ::::::::::E:::::::S:::::::::::TLT:::::::QP:::::::::::::::::L NP0738A ::::::::::::V:::::S::::::::::::LQG:KE:::EP:::::::::::::::T:: HVO_A0487 ::::::::::::V:V:::::::::::T::::C::::RE:::::::::::::::::::A:I HQ1829A ::::::::::K:A:::::Q::::::::A::I:Q:FDQD::S::::::::::::::::T:I VNG1573 MTESESASG:D:V::G:::::::::::::::A:::A:::HD:::::::::::::::::P: hla0302 ::::::::::K:L::G::::::::::::::T::::::::H::::::::::::::::::R: Hmu2011 ::::::::::N::::G::S:::::::::::T::::D::::::::::::::::::::::H: Hbo1612 ::::::::::D:::::::K:::::::::::IVQ::Q:D::T:::::::::::::::::R: consensus AGRPSRTLDPWLEGEDGLRRNYARG--DGDICVVEGMMGLYDGDCSSTAAVAETLDLPVV #oth 423...1..3..3.32.31.1.31.113..2.....2......244...2..35.31.11 Hbo0928 L:::::::::::A:D:::E:T::::AT:::V:::::::::::::-V::::::AK::::I: rrnAC1102 VDT:::::::::A::::M::T:W::::T::::::::V::::::TKT:::::::G:::::: NP0738A CS::::S:::::S::E:C::::W::::T::V::::::::::::T-N:::::::::S:::: HVO_A0487 V:K:::::::::::D::M::T::::::E::::::::::::::::-T:::R::AL:::::: HQ1829A :DC::::::I::::V::V::::Y::::N::F:::::V::::::::::::M:::A::::II VNG1573 V:T:::S:::::S:T::M::T:HQ::::::V::::::::::::SVA:::R::SE:::::: hla0302 T::::::::L::Q::::::::::::::E::V:::::A:::::::G::::::::::G:::: Hmu2011 :::::::::R:::::T::::::Y:::::::::::::V::::::::::::M:::::A:::: Hbo1612 :::::::::L::::D::V::::H:::::::::::::V::::::::::::M::DA::V::: consensus LVVDAKAGMESVAATALGFRAYADRAGRDIDVAGVLAQRAHGGRHADGIRDALPDELTYF #oth ..1..31..1.1....2..35..23213221.1.21.2..1....11..12.1.2325.2 Hbo0928 :::::TT::::I:::::::::::::M:Y:V::::L::A::R::::EE::KN:I:V::H:V rrnAC1102 :::::::::::::::::::AQ::::I:V::E:::I:::::::::::::::::::ED:::: NP0738A :::::::::::::::::::S::::::::::E::::::::::::::E::::E::::::A:L HVO_A0487 ::A::R:::Q::::::Y:::T::::M:I:A:::::I:S::::::::E:::::::E::P:L HQ1829A ::::::::::::::::H:::S::SH:::::::::I:::::::::::E:::::::::IQ:: VNG1573 :::::S:::Q:::::::::Q:::AE:SV:V:::::::::::::::::::::::::S:::: hla0302 :::::S:::::::::::::::::::I::G:::V::I::::::::::::::E::::D:::: Hmu2011 :::::::::::::::::::QR::ASI::E::::::I::::::::::::::E:::EGIE:: Hbo1612 ::::::::::::::::H:::E::SH:::::::::II:::::::::E:::KE::::GMA:: consensus GRIPPRDDLEIPDRHLGLHMGDEAPLDDDALDAAAEHIRTERLVDIAREPPRPAEPEP-- #oth ..2..523.31.1.....32.4.1225421133.132232331324124.3434544411 Hbo0928 ::T::L:G::V:E::::::Y:::SAV:::::::::R:VD:TE:LAL::R:RVD:P::R:: rrnAC1102 :::::MS::::::::::::::S::G::R:::ST:::T:DI::::ET::A::EV:TT:R:: NP0738A ::V::LSG::::::::::Q::T:::IA:ET:AD::A::DI:::::::A:::::-::S::: HVO_A0487 :::::S::::::E:::::YL::::::S:E::::::DG::ADA:AEV::::DWD::EVE:: HQ1829A :::::QSS:S::::::::E::S:S:::TK::TE:::T:H::QIIAA::A::::EA:SEDV VNG1573 ::V::::::DV::::::::::S::AI::::V::::A:VAAK:IA:V::T::::PAHD::: hla0302 :::::N:::AV::::::::::::S:VP:::::::::GL::::::::S:::AGAL::AT:: Hmu2011 ::::::E::::::::::::::A::::GEE::AE:GA:L:::::AE::TV::::-D::::: Hbo1612 ::::::SN:::::::::::::E:S::EP:::SE:::T:::D::::A::::::::QR:A:: consensus --------------AVPATDV---RVAVARDSAFCFAYPATIERLRERATVETFSPVAGD #oth 11111111222223644413522111.1.4.3..2.5..11312.33215.42.1.3.1. Hbo0928 ::::::::::::::P:ES::::::T::::T:D::R:V::SVR:H:AA:::::P:A::::: rrnAC1102 ::::::::::::::NTGDSPADR::::::Q::::::I::SVL::::SE:S::P::::::: NP0738A ::::::::::::::ER::::::::T::::D::::::R::::::::::::A:T::A::::: HVO_A0487 ::::::::SGTRAEP:Q:::SDRPTI:::::E::::V::S:LA::ESLG::SY::::::: HQ1829A QSQSSISKTNSGFNST:N:E:SHP:I:I:D::::::R::::V:L:NN::N:I::::L:D: VNG1573 ::::::::::::::-A:D:GQ:::T::::D:A:::::::::R:::::::D:V:::::::: hla0302 ::::::::::::::::ES::GDRP:::::::D::R:M:::::::::::::::P:A:I::: Hmu2011 :::::::::::::::G:::EK::::::::::E::Q:Y::::V:::::::D:T::A:T:D: Hbo1612 :::::::::::::DKRTE:GS::::::::S:A:::::::::::::::::E:V::::I::: consensus DLPDCDGVYLPGGYPELHGAALADSPALDELAARAADGLPVLGECGGLMALAESLTTTDG #oth 31.31.11........11234115231.232151.11.2..31......2.311..1311 Hbo0928 ::::::A:::::::::R:TE:I:E::::STI:E::::::::F:::::::V:G:::::AE: rrnAC1102 SV::A:AI:::::::::::ES:ETGGT:::I:V:::::V::Y:::::::::S:::::::: NP0738A PV::::::::::::::::AE::::GDT::::GR::::::::F:::::::::S:T::D::D HVO_A0487 ::::::::::::::::RFA:D::S::T:S:::D::::::::F:::::::::T:::::::: HQ1829A P::I::::::::::::::::T::E:Q::RS::D::T::::::A::::::T::D::::::: VNG1573 :::A::::::::::::::TD::::A::::T:G:::::::::::::::::::::::::::: hla0302 S::P::::::::::::::A:E::M::::::V:SA::E:T::::::::::::::::::V:: Hmu2011 P:::::::::::::::R::D:::::::::T::R::::::::Y:::::::::::T:::::: Hbo1612 N::::::::::::::::::SE:EG::T::DI::::::::::I:::::::::T:::::DE: consensus DTYEMAGVLPADVRMCDRYQALDHVELRATRDTLTASAGETLRGHEFHYSAATVASDARF #oth 3.22...1..2224141.111....2.2.453243.3414321.......2.2424.121 Hbo0928 E:::::::::VSTHLTE:PVG::::G:::R::SIL::E:::V:::::::::::A:P:::Y rrnAC1102 ::::::::::::IE:Q:::::::::::E:RA::VA:TS:AHR:::::::::::LG:::S: NP0738A R::A::::::::::::E:::::::::::::DESAI::TD:H:::::::::T:D::A:GT: HVO_A0487 ::H::::I:::::T:QE:::::::::::::DG::::D:::::::::::::S:DP:T:::: HQ1829A ::::::::::LS:Q:E:::::::::K:::DHS::::DT::VRK:::::::::::D::::: VNG1573 ::A::::::::::::Q::::::::::::::G:::::GS:A:::::::::::::::::::: hla0302 E:HA::::::::::::::::::::::::::::AP:::::S::::::::::T:EIGT:::: Hmu2011 ::HS:::::::T:T:H:::::::::::A:E::::::G::QRR::::::::S:::GR::T: Hbo1612 -::::::::::::Q:::::::::::::::KT::::::Q:DR:::::::::S:D::::::: consensus AFDVERGDGIDGDHDGLTEYRTLGTYCHVHPESGAFDAFLDAL---- #oth ..322..3.121631.12.12.21..2.3.22.111.2133544411 Hbo0928 ::E:V::A:L::AN::::::::::::T:F:A::::L:::VESAGR:: rrnAC1102 :::MV:::::::E:::::::S:I:::::C:G::::::RL:AVPSKDI NP0738A ::EL::::::ADGRE::V:H::::::A:F:AD::V::R:VES::::: HVO_A0487 :::::::T::::-RE:::::::::::A::::::::::R:VSR:TD:: HQ1829A ::T:::::::::T:::VI::Q::A::::L::A:::::T:IERVRS:: VNG1573 ::A:::::::::::::::::::::::A::::::T::::::::::::: hla0302 :::::::T:::::N:::I:HQ::::::::::::::::::::G::::: Hmu2011 ::::A:::::ADGS::::::::V:::::C::::::::R::::I:::: Hbo1612 ::::V::S::QDSS::::::::::::::L:A::::::::TAN:::::