|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2874 | NP0194A | hla0918 | HQ3646A | HVO_0236 | Hbo1262 | VNG2088 | Hut2231 | rrnAC2788 | Hmu3149 |
1946 | NP0194A | 2849 | 1709 | 1560 | 1568 | 1645 | 1624 | 1725 | 1733 | 1741 |
2203 | hla0918 | 1709 | 3334 | 1838 | 1906 | 2019 | 1799 | 1687 | 1798 | 1747 |
2068 | HQ3646A | 1560 | 1838 | 2967 | 1928 | 2122 | 1790 | 1588 | 1702 | 1693 |
2129 | HVO_0236 | 1568 | 1906 | 1928 | 2898 | 2184 | 1729 | 1525 | 1684 | 1719 |
2260 | Hbo1262 | 1645 | 2019 | 2122 | 2184 | 2888 | 1805 | 1637 | 1738 | 1781 |
2049 | VNG2088 | 1624 | 1799 | 1790 | 1729 | 1805 | 2836 | 1643 | 1694 | 1781 |
1987 | Hut2231 | 1725 | 1687 | 1588 | 1525 | 1637 | 1643 | 2857 | 1887 | 1903 |
2170 | rrnAC2788 | 1733 | 1798 | 1702 | 1684 | 1738 | 1694 | 1887 | 2859 | 2210 |
2225 | Hmu3149 | 1741 | 1747 | 1693 | 1719 | 1781 | 1781 | 1903 | 2210 | 2876 |
450 symbols consensus ----------------------------------------------------MRVSEGGV #oth 1111111111111111111111111111111111111111111111111111.423..42 NP0194A :::::::::::::::::::::::::::::::::::::::::::::::::::::E::::S: hla0918 MLARRLHVVVISILLFPLRRAKVPASRPHRSRDRSARHAERGPFVVDSRTRG:DIE:::L HQ3646A :::::::::::::::::::::::::::::::::::::::::::::::::::::NIT::V: HVO_0236 :::::::::::::::::::::::::::::::::::::::::::::::::::::H:::::: Hbo1262 :::::::::::::::::::::::::::::::::::::::::::::::::::::D:R:::I VNG2088 :::::::::::::::::::::::::::::::::::::::::::::::::::::D:::::: Hut2231 ::::::::::::::::::::::::::::::::::::::::::::::::::::::ER::R: rrnAC2788 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::R: Hmu3149 :::::::::::::::::::::::::::::::::::::::::::::::::::::::T::Q: consensus TVEVPEARDGAS-GKG--DDVFFNPTQELNRDITVAALRAYREREPR-----AESYLDAM #oth 122..42332122.5.1133..1.11......2.2.2111221143211111233....1 NP0194A ::::::E:H:::E:S:::EG::Y::V::::::::A:V::TVSDD---:::::CDE::::: hla0918 ::S:::::::::E:T:::GG::::::::::::V:::V:::::D::::::::::S:::::: HQ3646A ELT::A:::::DA:V:::::::Y::::::::::::::::::Q::::::::::::T::::: HVO_0236 EI:::D::::::A:T:::::::Y:::::::::::A:V:::F::::::::::::::::::: Hbo1262 E::::G::::::E:A:::::::Y:::::::::V:::T:::::::DD:::::::::::::: VNG2088 ::S::T:SG:--::E:AA::::::A:::::::L:::T:A:F::::::::::::A:::::: Hut2231 ::T:::QAEE--::V:::ES:::::V::::::L::::I::V:::VAERDGHPV:T::::T rrnAC2788 ::T:::QPEA--::::::A::::::V::::::::::::::::::T:::::::VST::::T Hmu3149 ::::::QA:A--::::::EN:::::V::::::L:I:T:::V:::::::::::::R::::T consensus AASGIRGVRAAAEGYDVTCADVDPDAVELARRNLERNDLDGEVVHRDANALMH------- #oth 1.1.1.1....241212.32.2.32.111243..23122313233211.23112211111 NP0194A ::::::S:::::A:::::AC:I:D:::A:T::::D::GV::T:H::NV::H::::::::: hla0918 ::::::::::::::::T:::::::::::::AE::AA::::::T::::V:::LY::::::: HQ3646A T:::V:::::::S::::::T:I:::::A::QS:::K:::::QTLPS::::VL:QSGPESP HVO_0236 :::::::::::::::::::::L:A::::::QS::D:AGNG::A:::N:::::Y::::::: Hbo1262 ::::::::::::::F::::::L:ES::::::::::::E::::A:::N:::::Y::::::: VNG2088 T::::::::::NA:W:::M::::A::::::TS::A::G::::::A::::S:L:DH::::: Hut2231 ::T:V::::::EN:F:A:LC:::EA:::RC:E::AG:::::::L::::::V::::::::: rrnAC2788 ::::::::::::NDWET:LC:I:D::TA:CEQ:::::::AAS:RRS:::V:::::::::: Hmu3149 ::::V:::::::D:WEA:LC:::::::A:CE::::::G:S:T:R:E:::VA::::::::: consensus ---ERVFDVVDLDPFGTPIPFADAAFANARNLVCVTATDTAPLCGAHFESGVRKYSAVPR #oth 1112543.1..2..1.1.11.1.11222124211.....1.......23..1.2.223.1 NP0194A ::::SAH:::::::::::MA:::::VRS:GEYL::::::::::::::::::::S:D:::: hla0918 ::::N:::::::::Y::::::::::L:::::::::::::::::::::LN::I:::G:::: HQ3646A LGP:AI:::::::::::::::::::::::::::::::::::::::::QQ::I:T::TL:: HVO_0236 :::DE:::::::::::::M::::PT:::T:D::::::::::::::::QK::I:::GCL:Q Hbo1262 :::DS:::I:::::::::::::::::::T:D::::::::::::::::QK::I::::TL:Q VNG2088 :::D::L::::I::::S:M::::::::::::::::::::::::::::::::::::::T:: Hut2231 :::::Q::I::::::::::::V:::LQS:GRMLA:::::L:::::::::::::S:::::: rrnAC2788 :::SEA:::::V:::::::::::::VQGTKH:L::::::::::::::::::::S:G:::: Hmu3149 :::SDPW::::I::::::::::::::QGT:D::::::::::::::::::::::S:::I:: consensus NTEYHAEMGLRVLLSALVRTAARYDIAARPILSHVTRHYARTYLELDHGATVADALIEEL #oth ..21.2...2.2.11112.....1.3114.211.113..1.1..22151.34.1222342 NP0194A :::F:::::::::::::::::::H::::E:V:::::S::V::::RV:S::RA::::L:H: hla0918 ::D::P:::::T:I:::::::::::K:::::V:::S::::::::::ES::Q:::DC:D:: HQ3646A :::::P:::::::::::I:::::::T::I::::::::::V:::::::TR::R::E:LSD: HVO_0236 ::D::P:::::T::G:M::::::::K::V:::::A::::::A:::::ER::K::E:L:ST Hbo1262 ::D::P::::::::::MI:::::::K::V::::::::::::::::::GR::K::E:V:Q: VNG2088 ::N::::::::I::G::A:::::::VGVT::::::SD::V::::::::R::D:N:AV:QV Hut2231 :::::S:::A:I::GS::::::::::::::A:T:A:D::V::::D:ER::RA::DA:G:: rrnAC2788 :::F:::::M::::::M:::::::::::::::::A:K::::::::F::::K::NDC:D:: Hmu3149 :::::::::M:I::G:M::::::::V::::::::A:K::::::::::::::::N:AVD:: consensus GYVYHCQDCLWRDHERGLIADPPDACPNCGQHRLLTAGPLWLGPACDPDFARAVREQITE #oth .2121.13..5.3225122121344.25.2342332...21..434243.353.334233 NP0194A ::ID:::R:::::::::RVP::TTT::H:::S-TW::::V:::::H:AA:VDD:AGA:PD hla0918 ::IDN:E::::::PTH::::::V:T::V::SD:V::::::::::VA::::::::::RV:D HQ3646A ::::::E:::T:Q::F:H::H::SM:HH:EGN:VI:::::Y::SIREQG:T:R::NH::T HVO_0236 :F::::E:::H:EA::S:V:H::E::A::DST:I:E:::I::::VSE:A::G:::DEV:: Hbo1262 ::::::E:::E::::F::::H:::D::A::SS:T:V::::Y:::V:::::T:R::DH::: VNG2088 :H:::::Q::S::::Y::V:A:RAE::R::G:QV:::::::::::HEEA::AS::::L:R Hut2231 :::H:::Q::Y:EA:N::::H::E:::K::::-:Q::::::::A:HKT::LER::G::DD rrnAC2788 :::H:::H::::::DY:::::::ED::V:EK:-:Q::::I:::RT:::E:VS::S::VS: Hmu3149 :H:::::Q::Y:S::A::H::A::::::::::-:Q::::::::GT:E::::A::T:HL:: consensus EMGTAKRARELLATLAAELDTPTHYDQHRLCKRWGRSAIAMDDFLDALRDAGYEASRTHY #oth 31.12331442.61226.1341..1...1.215.322153.22.225.14..331121.1 NP0194A SF:::DK::D::S:V:T::HQ:::::::K:Y:::NEPN:::::::A:::A::H::::::: hla0918 D::E:::::K::G:V:R:::::::::::::Y:A::EP::G::E:V:R::G:::::::A:: HQ3646A :::EI:Q:DSI:KMVEN::E::::::::::::K:T::::G::E:IEQ:HT::FD:T:::: HVO_0236 DF:::::::K::D:::V:::::::F:::::::L:::::SK:ET::ET::::::D:TPA:: Hbo1262 :::EK::::SM:E:V:G:::R:::::::::::M:S:::TS:::::AE::::::::TQA:: VNG2088 :::E:SQ:FH::Q:IEG::HE:::::::::YSQ::EP:VG:AE:::Q:::::LR:::::F Hut2231 G::::EEG::::E:::D:::VA::::::::T::::E::V::A:::::::E::H::::::: rrnAC2788 :::::DE:K::::::G::I:::::::::::::::::G:E:::E:IEK::::::A:::::: Hmu3149 D::::D::A::::::G:::P:::::::::::::::VG:P::::::::::A::H:S::::: consensus GGTTFKTDADVAEIRAATAD-D-------- #oth 3..11.131325121412435343111111 NP0194A ::::::::::::D::N:VE-:-:::::::: hla0918 R::AV:ST:SIP:M:D:ILGNEGDADGDAD HQ3646A S::A:::N:TI::::S::T:P:EQ:::::: HVO_0236 H::A:::::T:::::EV::AL:PEA::::: Hbo1262 S::A:::N:TIE:M::V:T:S:N::::::: VNG2088 ::::::::GGL::VE::VL-:-:::::::: Hut2231 :::::::T:::S:::::::GDE:::::::: rrnAC2788 :::::::::::V:::E:::::-:::::::: Hmu3149 :::::::A:::T:::D::V:SS::::::::