|
Pairwise sequence scores | |||||
---|---|---|---|---|---|
Consensus score | 1363 | VNG2152 | HVO_0426 | hla2060 | rrnAC0854 |
870 | VNG2152 | 1695 | 552 | 602 | 642 |
880 | HVO_0426 | 552 | 1266 | 660 | 696 |
960 | hla2060 | 602 | 660 | 1323 | 791 |
1050 | rrnAC0854 | 642 | 696 | 791 | 1799 |
238 symbols consensus ------------A----GAV----------DRAASLASDAPT------------------ #oth 111111111222122221112222222222323322322312111111111111111111 VNG2152 MRGQPVHRRSVL:LVGG:::SALAGCTDTT:GD:TTTTPE:::::::::::::::::::: HVO_0426 ::::::::::::-::::---::::::::::----MI:::SSE:::::::::::::::::: hla2060 ::::::::::::-::::---::::::::::M::P::LD:P:::::::::::::::::::: rrnAC0854 :::::::::MSV:VDRA:::ALTERVGKVRV:VQ::S:H::VLGQQERGVFVDPRAVAHD consensus ---RRRG--P-----T--------SPD---LQLRSPAFDDGARIPRRHGYSAANVNPPLR #oth 1112.3222121222122222222111222.322.1..11.22..23111221121.1.2 VNG2152 :::P:SETQ:T:PTA:DDIPIAGP:::FGG:G:A:N::A:::A::D:YTR:G:D:::::S HVO_0426 :::::::::-:::::-::::::::---::::TP::::::::CP:::P:::A:::ES:::: hla2060 :::S:PM::-:::::-::::::::---::::EFT:::::H::::::DY::TER::::E:: rrnAC0854 LHV::F:AE:QMAAG:TFLCLSVI:::MAD:::::::::::D:::EE:::::::T::::E consensus IAGVPADAASLALIVDDPDAVEPAGEVWDHWLVWNIPPDRDRIPAGWEPTEATEGTNDFG #oth .311.31121.2.11.....12...11.1..2...1212222.11111.22121.2.11. VNG2152 :::::E:::T:V:V:::::::D::::::L::::::::AS:T::::A:T:::P:V:::::: HVO_0426 :G:::PGT:::::VM::::::K:::::::::F:::VA:ET:A:A::ET:PG:V::::SY: hla2060 :S:S::::T::::::::::::::::KI::::V::::D::::H::E:::::T:E::R:::: rrnAC0854 :EN::S::S::L::::::::E::::K:::::::::::::IG::::::::D:::::Q:::: consensus ERGYGGPNPPDREHTYRFLLYALDTTLDLAAAATKADVRDAAAGHVLADAQLAGSYAP #oth .211...1...21.1...2.....22.11333.1231132.23...12312.3.1112 VNG2152 ::D::::A:::DT:L:::K::::::::I:PQD::ERT:GN:VR:::::ST::V::H:: HVO_0426 :::::::::::G::::::::::::AP:::D:G:::::LKR:I::::V:ETK::::::L hla2060 :T::::::::::::::::E:::::DD::::SS::AT::::::E::::D::R:E:T::: rrnAC0854 :V:W::::::::::::::::::::::::RSP::D:D::Y:::S:::VEK:::N:T:PA