[J] (RPS1A) COG1890 Ribosomal protein S3AE 9 genomes BUD0539 9 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG0787 rrnAC1429 HVO_1145 Hbo0412 Hmu1737 Hut1411 hla2680 NP3210A HQ2358A

Pairwise sequence scores
Consensus score	1541	VNG0787	HVO_1145	hla2680	NP3210A	Hut1411	rrnAC1429	Hmu1737	Hbo0412	HQ2358A
1131	VNG0787	1517	979	1046	1084	1097	1038	1048	1064	997
1173	HVO_1145	979	1611	1123	1036	1056	1090	1039	1217	1146
1277	hla2680	1046	1123	1560	1087	1125	1205	1150	1229	1155
1274	NP3210A	1084	1036	1087	1522	1206	1162	1168	1132	1108
1331	Hut1411	1097	1056	1125	1206	1514	1230	1259	1168	1113
1359	rrnAC1429	1038	1090	1205	1162	1230	1554	1293	1210	1150
1339	Hmu1737	1048	1039	1150	1168	1259	1293	1500	1200	1115
1347	Hbo0412	1064	1217	1229	1132	1168	1210	1200	1565	1323
1274	HQ2358A	997	1146	1155	1108	1113	1150	1115	1323	1547

221 symbols
consensus       MSERSVSKQKQEKRWYTVLAPEQFDREELGETPADEPEKVLGRTIETTLGDLTNDAGENN
#oth            .......123331...123...3.1.41..3.4.11111151..2231.11243.412..
VNG0787         :::::::::D::::::::::::E:::A:::::L:E::DQ:YD:::QAA:S:VR-:G:D::
HVO_1145        ::::::::::RG::::::I:::N:::K:::S:F::::::IS:::V:S:::::ND:Q:A::
hla2680         ::::::::SREQ::::S:::::::::Q:::::L:E::DQ:V::::T::::E::G:S:A::
NP3210A         ::::::::::::::::::M:::I:::A:::::::::::Q:YD::VQ::::E:Q::PS:::
Hut1411         :::::::R:T::::::::::::E:G:::::T:::::::Q:::::::::::::R:::::::
rrnAC1429       ::::::::RTEQ::::::Q::::::::V::K:::E::D::::::::::::E:::::S:::
Hmu1737         :::::::R::::::::::::::::::::::::T:::A::::::::Q::::::KD::S:::
Hbo0412         ::::::::::RG:::::LI:::::::::::::M:::::::D:::::V::::::G:Q:A::
HQ2358A         ::::::::::SSD:::SII:::::::S:::S:F::D:::IH:::L:V::::I:G:Q::::

consensus       TKLTFKINDVGSDSAYTEFIKHELTRDYLRSLVRRGASKVEAFITVLTTDDYRVQIQPVA
#oth            2....214113..2.1.2.123..1...1...2...2..13151.12.1....112....
VNG0787         I::::Q:D:::::::S:Q:VQA::::::Q:::::::S:::AVTV::::::::::R:::::
HVO_1145        V::::::T:::::A::::::QQ:::::::::::::::::I::NV:AI:K::::::L::::
hla2680         :::::::T:::::T:::::::Y::::::::::::::::::::S::::::::::IRV::::
NP3210A         :::::Q:S:::::T:::D:VQ:::::::::::T:::T:::D::V:::::::::::V::::
Hut1411         :::::R:R:M:::T::::::R:::::::::::::::S:::::YV::::::::::::::::
rrnAC1429       ::::::::E:A:::::::::R:::::::::::::::S:::::Y:::::::::::::::::
Hmu1737         ::::::::E:A:::::::::::::::::::::::::S:::::::::::::::::::::::
Hbo0412         ::::::V:::S:::::::::::::A::::::::::::::IS:S:::::K:::::::::::
HQ2358A         ::::::V:::T::A::::::::::A:::::::I::::::ID:A:::R::::::::L::::

consensus       LTTKKADRSQEQAIRRTMIDLVEEAAEDRTFEDLIDS-IVEGRLSSAIYGEAKTIYPLRR
#oth            3...2..2..121..23.21422222422112413211211.2....1.31113......
VNG0787         Y:::Q::Q::QH:::::::::::::G:E::::A:LN:::I:::::::::D::N:::::::
HVO_1145        F::::::::::HE:::I:TE:TR::ITGH:YDA:TE::V:::::::::::D::V::::::
hla2680         :::::::::::K::::V:::K:HA::::::::SFV:A:::::N:::::::D::L::::::
NP3210A         Y:::S::::::::::S::V:::::S:A:N::A:::::::::::::::::N::::::::::
Hut1411         :::::::A:::::::EQ:VEMI:::::E:::D::::::V::::::::::N::::::::::
rrnAC1429       V::::::A:::K::::::::::R:T:::H:::Q:::::V::::::::::::::D::::::
Hmu1737         :::::::A:::K::::Q:::I:::T::::S::Q:V::::::::::::L:S:C:D::::::
Hbo0412         F:::::::::::::::V:::F:::::QE::::E:V::AV:D:::::::::::::::::::
HQ2358A         F:::::::::::::::V::::::D::DE:::A::::A:AI::Q:::::::::::::::::

consensus       VEIQKTTLEARPEEVAAEEETAVDVDEEDVAV---------
#oth            ..12.3211.2.1..21..112.112332221232211111
VNG0787         ::VE:A::::H::::HE:::::::FSG:----:::::::::
HVO_1145        ::VK:FS::::::::E::::A::S:::D::::DVDDEETEA
hla2680         :::::L::::::S:::::::::::::ADE:::DADE:::::
NP3210A         ::::::R:Q:S:::::::::AS::::D-----:::::::::
Hut1411         ::::::::::H:::::E::::S:::E:-----:::::::::
rrnAC1429       :::K::::::::::::::::::::::::::D:EA:::::::
Hmu1737         :::::::M:::::::::::::T:::E:-----:::::::::
Hbo0412         ::V::L::::::::::::::A::::::::I::DEA::::::
HQ2358A         ::VK:L:::::::::::::AA::::::A::::E::::::::