|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 4255 | HQ2793A | rrnAC1002 | Hmu1644 | Hut0604 | NP2602A | hla1216 | VNG1410 | Hbo2626 | HVO_2860 |
2344 | HQ2793A | 4555 | 1682 | 1778 | 1837 | 1805 | 1811 | 1183 | 2139 | 1983 |
2632 | rrnAC1002 | 1682 | 4333 | 2462 | 2231 | 2079 | 2128 | 1222 | 1911 | 2021 |
2730 | Hmu1644 | 1778 | 2462 | 4317 | 2305 | 2119 | 2085 | 1360 | 2128 | 2179 |
2906 | Hut0604 | 1837 | 2231 | 2305 | 4304 | 2177 | 2236 | 1389 | 2159 | 2205 |
2690 | NP2602A | 1805 | 2079 | 2119 | 2177 | 4236 | 2194 | 1418 | 2083 | 2132 |
2993 | hla1216 | 1811 | 2128 | 2085 | 2236 | 2194 | 4301 | 1365 | 2400 | 2481 |
1674 | VNG1410 | 1183 | 1222 | 1360 | 1389 | 1418 | 1365 | 2576 | 1414 | 1563 |
3036 | Hbo2626 | 2139 | 1911 | 2128 | 2159 | 2083 | 2400 | 1414 | 4286 | 2812 |
3072 | HVO_2860 | 1983 | 2021 | 2179 | 2205 | 2132 | 2481 | 1563 | 2812 | 4232 |
621 symbols consensus ---MDIGLVGSGP--AAEAVRAALADIDAAVDA-------------VEPDALDSADLAVV #oth 123533333152111142246343526446468111111111111176455644534331 HQ2793A :MSYALAIT:P::SA:ID:AKQVMTSTNTGL:SDPCYPSSKSEPTFIHTESPAD::VT:: rrnAC1002 ::MRTVEV::R:::::VD:LA:F:::::VS:AQ:::::::::::::PSTP:DS:G:::I: Hmu1644 :::-----::::::::T:SLL:T:D:L:VSI:H:::::::::::::R:AP:V::::F::: Hut0604 ::::TV::::A::::::D::ES::S:VEG::ET:::::::::::::AA::EI:EYE::I: NP2602A ::MTTV:IA:DA::::T:::::::D:SA:DTV:::::::::::::::D:A::GDV:I::: hla1216 ::::::::::D:::::V:::S:::G:V:VN:MP:::::::::::::::VGL::GF::::: VNG1410 :::----------::------------------:::::::::::::-------------- Hbo2626 VTTH::A:::::::::::::::::::C::::ND:::::::::::::TT:EDAAE:A:::: HVO_2860 ::::::::::::::::::SI:::C:::::T:VE:::::::::::::ST::S:G:F::GF: consensus VDTAGAEAFETAN----A-EAATRWVAIELGGVGGVPV--VDAAVSGF-PETACYDCLRT #oth 356324653454611541555544334214114115234443112243424564234135 HQ2793A :T:VEQTGEDGTTVIPG:LS:DSAM:F::F::M::C:IDDI:::ITTLPAKGPTFET:Q: rrnAC1002 :::V:S:R:AAW:::DR:KDD:IP:::V::::::::::::T:::I:::G:::G:F::::: Hmu1644 ::ET::AT::::S::EQ:RDGG:P:L:V:::::::R:::::P:::T::D:DRE:::::CG Hut0604 IEV:::N:::Q::::QR:IQTG:S:I::::::::::::::::::IT::G::::::E:::K NP2602A SGDV:TGG::R:A::TT:S:TS:PL:C::V::I::QA:AG:E:::::AA:G::::E:::: hla1216 :::::S:T:AA::::::-::HLD::::::V::L::::LEP:::::TA::-DET::::::R VNG1410 -------------::::-:-------------------::--------:----------- Hbo2626 :AP:::TVPQ:VG::::-:M::D:L:VV:I:::::::LAEL:::::V::AG:SR:AD:C: HVO_2860 :AA::SD::D::D::::-::::S::L:V:I:::::HA:PDL:::::A:D::S:DFAA::A consensus RVAAT-TDPTDEP--AGDRATVRFAGAVAGRRVAALL-------AGDD-VLGTVVEIPG- #oth 124331355445323545332524112211343465311112136545534241613231 HQ2793A ::MT:::S:G:AG::FA::T:IT-::VL::Q:AVGMC::::::T:SAVDIS:::L::S:T rrnAC1002 ::E:::V:D:E:VTG:PAA::Q:::::L:::L:TQF::::::::D::AAL::::T:L:H: Hmu1644 :IE:N::TAAA:GGEDPGP::L:V::::::EA::DY:AAGSARTDA:SS:::H:::L:H: Hut0604 ::R:N:V:::E::TK:PPPT:A:::::::::AA:ST:::::DRSVDGPE:V:F:R:::D: NP2602A ::::::APD::DG::DT::::A:::::::::E::R:V::::::AGEESQL::G:I:V:H: hla1216 :::SGGAE:A:A:::::R:SA::Y:::L:::::IQ::::::::::::P::AD::::V::: VNG1410 -----:-------::----------------------:::::::----:----------: Hbo2626 ::::::::GG:S:::S:G:SA::L::::::::AV::::::::::T:::S:V:::A::S:T HVO_2860 :::S:::ESEGR:::G::::A::L::::::::GI::::::::::S:::::A:::::VS:: consensus ---AERRLLPVP---GCDCGGERGRTLDRTHADRDLDDALSRAERALDDRVGIVTQVGER #oth 222451533331111223436555554545634374353253115231314134531115 HQ2793A KIGP::D:IGT:DMY:H:GDMSERFIPEQ:AR:VN::TS::H::::V:::L::I:::::: rrnAC1002 :::TQ::F:::::::::::::TQ:HS:GDGRQTAPDSE::::::LG:::::::A:E:::V Hmu1644 :::RK::FF:L::::::S:::::ET:I::S::TV:TEQ::E:::::::::::::Q::::A Hut0604 ::::T::::S:::::H:E::S:PS::I:::T:::::EATIG:::QG::::::::QE:::I NP2602A ::::A:QV:::::::::S::SRA::Q:EL:::::T::ES::L::G:F:E:::PI:S:::A hla1216 ::::::T:::::::::::::ADP:DA:P:E:QE:S:S::ID:::::V:P:I:LLSE:::Q VNG1410 :::---------:::--------------------------------------------- Hbo2626 GVT:::TV:::::::---DPVD:D::VR:DYR:AAV::S:A:::::::::T:L:A::::: HVO_2860 :::P::SF::T::::---SPT::D:::::DFRAVE:::::A:::S:V:::::::R::::: consensus ESFPAPYYLAQLADTEGFSDARAAEFAAGVDADWDAAFMKALGEALERYSAGVYRTAEFT #oth 11113111324533154221342456221235312613.1.1..31...2.1..235425 HQ2793A ::::::::I::I:S::S:::T::V::::::::::NI:Y:::::::::::C::::::EK:I rrnAC1002 :::::::::ST::::A::::VS::AK::::AI:::T::::::::NY:::A:::::EGNLQ Hmu1644 ::::::::::::T::S::::VT:PRQ::::A::::G::::::::SY:::A::::TA::T: Hut0604 ::::::::::RNG:::::::VSSTGP:::::V::NG:L:::::::Y::::::::::DRLQ NP2602A ::::V:::::S::A:-P::::D:PDH::::GLS::P::::::::G::::::A::S:DRLL hla1216 ::::V:::V:RV:::TP:::::::::GG::::G:::::::::::G::::A:::::G:S:: VNG1410 --------------------------------------:R:V::::::::::::::R::E Hbo2626 ::::V::::::T:::R:::::::::::::::P:::::::::::::::::C:::::AS::: HVO_2860 ::::L:::V::T:::TVYA::::::L:G:AA:G::E:Y::::::::::::::::::S::A consensus TAPAADRDAAVAPDAFVRPDS---PDASDPIPWVEGENLATGESVSLPAEFVHYPPPENR #oth 432355533213142..412444653344634.26122.4.246332.134142..2553 HQ2793A K:SENTQS:::S:RR::Q:ERTPTY:P:N:::::H:I::::D:H:A:::T::YH:::QE: rrnAC1002 HGTV::VP:::T::T::-R:E:AEW:E:HAL:::PA:::L:D:QR:::::T::::::S:A Hmu1644 ::T::SL:D::::E:::A::D:AGA::TTELD:IGAR::::D::ALV:::L:FH::VGSH Hut0604 ::SVEEL:NPI::S:::T:EP:::-PE::S:E:I:::::::SQ::QV::SVAM:::AGD: NP2602A VD:----:RR:PA::::A:EP:::--PGEVAY:YPA:H:E:::RTAI:S:L:VF::::T: hla1216 R::::NVPNP:::::::::E:AEPYARD:RL:::T::H:G:::VA::::::::F:::::: VNG1410 :HT-P:H::::P:S:::::A::::GA:G:TTQ::R::H:Q::TDAL:::PR:VF:::NPD Hbo2626 V::ERT:ARP:S:AR::::::YRA:::EE:::::D:::::::DT::V::::::::::DT: HVO_2860 V::::S:P:::P:SR::::::FRD::PDE::Q:::::D::::AT:::::::::::::SE: consensus HRPAITTGLGLGNSGTEALLSGLYEVIERDAAMLSWYSTFDPLAL-----------DVDD #oth 52123.....1.23242.212.11.11....1121...121.232111111111113252 HQ2793A Y::::::::::::G:V:::CA:IS::::::::::A:::::E:VK::::::::::::T::: rrnAC1002 V:::T::::::::TV:::::T::::::::::::::::::::::RV:::::::::::AI:E Hmu1644 V::PL:::::::S::C::::A:::::::::::::::::::E::G::::::::::::T::: Hut0604 F:::N:::::F::ATV::::::::::::::::::::::::E:::::::::::::::::G: NP2602A I::::::::::::GTV:::C:::::::::::::V:::::D::M:::::::::::::A:E: hla1216 Y::::::::::::::PH:A::::::A:::::T:T:::::A:::GI:::::::::::E::: VNG1410 SGHP::::::::TA:AD::::::::::::::T::A:::::E::::AVPLPSDTADD:TPA Hbo2626 :K:P:::::::::::::::::::::::::::TI:A:::S::::K::::::::::::::A: HVO_2860 :K:S::::::::::::::I:::::::V::::T::A::::::::G::::::::::::::T: consensus -EGFRTLARRARSEGLSVTPLLLTQDVDVPVVAVAVHR-DGEWPRFAAGSGADLDPAAAA #oth 125132.54.13312.31121.2.1.1....11121212322..3..4.12.3.12431. HQ2793A ::SY:::CQ:::GV::T:QTF:::::I::::I:T::Y:DGA:::Q::I::D:G:::V:T: rrnAC1002 H:QYE::R:::T::::D::A:::::::::::IT::LAQ:-D::::::L:TD:::N:G::: Hmu1644 :DV:G::YE::A::::T::::::::::::::::::::::-D:::S::I::A:::::EQ:: Hut0604 :GA:E:::::V:T:::::::::::::::::::::::::A::D:::::L::::H::::::: NP2602A :::Y::::A::G:::::A:A::::::::::::::C::::E::::::::::A::::::::: hla1216 ::::AE:EK:::T:S:::::::V:T:I:::::::G::::E:D:::::::::::::::::: VNG1410 :DA:AA::::::A:S:::::::C::::::::::::::::EA-::Q::V::A:::NAE::: Hbo2626 :::Y:A:VK:::::N:TA::::V::::::::I::::::::::::Q::M::::S::V:D:: HVO_2860 ::T:E:::A:::::S:E::A::V:::::::::::::::::::::K::M:::::::ANR:: consensus RGALAEALQNWMELRSMGPEQAADAGGAIGEYADFPDAARAFVDADTTVPADSVGPDEPP #oth 421.1..1...3..141.224146341..241.33.542441444341122332113463 HQ2793A Q:S::::::::::::A::KDGV::TD:::D:::T::GRVQK:IMTE:::A:KDIA:SPI: rrnAC1002 V:::E:::::::::D:::::A:M::Q::::R::KS:GE:ADLTASE:A::L::L:::VDL Hmu1644 L:::E::::::::::::::::::E:S::::::::K::R:VDLLAY:Q:I::EA::::AVD Hut0604 :S:::::V:::F:::Q:::DG::::::::::::A:::IVAD::::AG::S::A:A::::L NP2602A ::::E::::::L:::R::RT::ESES::::D::A::E::::::::E::I::E::::A:R: hla1216 :S:::::::::T:::::::DA::KQ:A:::RH::::AET:::F:::A::::E:L:EP:LS VNG1410 AD:::::::::::::AL:::P:SQES::::A:::R:P::E::I:::::::V:T:::AD:: Hbo2626 :S::::::::::::::::::R:NAEK::::::::::::::R::N:GPA:::A:::::DV: HVO_2860 :S:::::::::T:::G:::::::TQ::::AT:::::KP::T::SP:A:I:::::::::T: consensus SG-AAELDAVVDRVADAGLDPYAARLTTRDVAALGFEAVRVLVPSAQPLFQGDPFFGDRA #oth 511431.42134223211.42.22.2.12.2362...1...12.3.....52222.12.1 HQ2793A T:::DA::SLIKH:TE:D::V::T:I::P::ST:::::::::I:G::::::QHS:::E:: rrnAC1002 :::E:::ETLC::A:::::A::GT::::::LEQ::::::::VC:::::::F:ES:::E:: Hmu1644 D::E:::::L:AALSE:::T:::T:T::::LDE::::G::::::E:::::L::A:::E:: Hut0604 A::SEA:ST:::::TA:::S:::V:::P:::E:M::::::::::::::::L:E:Y::::L NP2602A :::K:::T:L::::SA::::A:G::::P::IEM::::::::V::::::::T::AY::::: hla1216 G::-D::A:::::AEAV::E::V::T::::L:::::::::::::G:::::T::::::::: VNG1410 TDP:S::T::L:A:::::::A:G::::P::ID:A::::::::::A:::::VSE:R::E:: Hbo2626 :::K:::::::E:::::::::::V:T::T:::S:::::::::I:E::::::::::::A:: HVO_2860 E::::::::::SA:T:::::A::::T:P::::R::::::::V::A:::::I:E:Y:A::: consensus ETVPRELGFEPRLDRPFHPFP #oth 33.1542..11412142..1. HQ2793A KR::::F::DAK::::::::: rrnAC1002 ::::AD:::::::::DH:::: Hmu1644 ::::T:::::::::::H:::: Hut0604 :::SDR::::A:P:::::::: NP2602A RR::A::::::Q::::Y::Y: hla1216 RD:::SM::::D:EKAY:::: VNG1410 R:::ST:::::::::R::::: Hbo2626 TS::E:::::AE:QK:Y::Y: HVO_2860 :S:::D:::::::::E:::::