|
Pairwise sequence scores | ||||||
---|---|---|---|---|---|---|
Consensus score | 2556 | VNG2447 | hla1966 | Hmu1813 | HVO_0243 | Hbo1254 |
1483 | VNG2447 | 2667 | 1258 | 1133 | 1108 | 1193 |
1943 | hla1966 | 1258 | 2596 | 1586 | 1590 | 1604 |
1920 | Hmu1813 | 1133 | 1586 | 2467 | 1555 | 1608 |
1986 | HVO_0243 | 1108 | 1590 | 1555 | 2543 | 1778 |
2050 | Hbo1254 | 1193 | 1604 | 1608 | 1778 | 2595 |
367 symbols consensus ------------------DMIDLRSDTVTTPSEAMREAARDAPVGDDVYGDDPTVNELEA #oth 1111111111111222222311111111231222.....12.2.1111111..1.111.1 VNG2447 MFRNVTGRMTFPPGGGCP::::::::::A::T:::::::AQ:::EHGEH::::A:AAV:: hla1966 :::::::::::::MEIDE:T::::::::::::::::::::::E::::::R:::::::::R Hmu1813 ::::::::::::::::::----------------::::::N:::::::::E::::A:::: HVO_0243 ::::::::::::::::::-::::::::::L::DE::::::::A::::::::::::::::: Hbo1254 ::::::::::::::::::MS:::::::::R:::::::::::::::::::::::::::::: consensus RAADLVGKEAALFVPSGTMGNQIAARVHTDRGQELLVDRESHIYRWELGGLAQLSGLQVR #oth 2..211.211.11..11..1...1121.121..13.11131.2.21121.3111112.3. VNG2447 T:::A::MA::V::::R::A:::G:Q:::A:::SV::E:A::S::RGS:::::HA:V:A: hla1966 ::::A::T::::Y::::::A::::VH:::EP:::::LE::::::::::A:ASK:::T:T: Hmu1813 :::G:L::AD::::::::::::::V:A::E::::::L:::::::::::::T::HAQV:C: HVO_0243 :::E::::::::::::::::::::::::A:P:::A:::EKA:V:E::V::F::::::::: Hbo1254 A::E:::M::::Y::T::::::::::::::::::I:::EQA:::K::::::::::::::: consensus TVDAGERAVPTPEQVRDGAVEEDLHRPGTGLLCLENTHNARGGVAVPVAAIDAAADAAHD #oth 131111222..1211323421221.2111.1231.11.111..112134422..212.12 VNG2447 AF:G::TGC::A:::AAEITAGGG:::EV::A:V:IA:G:N:::VA::D:FA::VET::E hla1966 :I:::D:C:::::S::E:L:::::::::::::S::::::Y:::T:I::NQ:T:::EV:R: Hmu1813 ::::S::C::::::ISEAF:A::::::::::VT::::::Y:::::::ESHV:::C::::A HVO_0243 AY::::::A:::A::::H:R::S::VA:::V::::::::::::::::K:D::::::::R: Hbo1254 ::A::DA:::::Q:IQ::Y::QS::EA::::VAV::::::::::::SPET:::::::::E consensus LGVPVHLDGARLFNAAVALDVDPAALVRPVDSVMFCLSKGLGAPVGSILAGSEAFVEEAR #oth 211...1..1.111.11..12112323331.1.23...1.....1.121..3121123.1 VNG2447 HD::::V::T:V:S::T::G::A:T:LS:::::AV:::T:::::M:AV:::::S::AS:: hla1966 AD:::::::::V:::::::G::ASEI:A:::T:T::::::::::::::V::D:::::D:: Hmu1813 ::::::::::::W:::::::TA::::A:EA::::A::::::::::::V:::T:S::D::: HVO_0243 ::I::::::::::::C::::E::T:M:ER::T::C::::::::::::M:::P:::I:::V Hbo1254 :::::::::::::::C::::::::RMT:A:::::::::::::::::::::::SEY::R:: consensus RVRKLFGGGMRQAGMIAAPGLRALDNVDRLADDHENARRLAEGLDAIDGLSAPEPDTNIV #oth .11121....1...21..1.14..1.12.121..1..31..21..122.23111.1.... VNG2447 ::QEMY::::Q::::V::A:VC::E:RH:VHE::::::::::D:::LP:VT:A::::::: hla1966 :::::::::::::::::::::L::E:::::V:::A::E:::T::::L::IH::::::::: Hmu1813 :L:::::::::::::::::::E:::::::::::::::::::T::::::::RV:T:E:::: HVO_0243 ::::Q:::::::::L::::::V::::::::::::A::TV:::::::VS:::V:T:::::: Hbo1254 ::::::::::::::I::::::::::::E:::::::::A:::A:::D:::::::::::::: consensus VVDSEDAGITAAAFVEGCEDAGVLGGAFGEYTTRFCTHLDVDRADVDAAVDRIGDVVEAA #oth 212123.1211431123.323..2123322121.11.1111211.122112222311344 VNG2447 LA:TR::DV:::::LA:::EE::::T:D::::V:::::R:IGG::IA:V:SAA:E::--- hla1966 :AHT:::::::SDL:TA:K::::GCVE:A::::::T::::::GD:I:::I::::::IAEL Hmu1813 :::::P::::SD::::::VAR::RC:SVS:::::L::N:::::::::::I::::R::R:: HVO_0243 :::::G::L::EE:::L:D:V:::::T::Q:H:::T:N:N:S::::ER:::LVA:A::SR Hbo1254 Q:F:DE::LS:TS:::R::::::::::H:DHL:::::::::S:::::D::E::EAAI:GS consensus ------- #oth 3211111 VNG2447 ::::::: hla1966 A:::::: Hmu1813 TE::::: HVO_0243 ::::::: Hbo1254 SQTSGSR