|
Pairwise sequence scores | ||||||||
---|---|---|---|---|---|---|---|---|
Consensus score | 2333 | VNG2151 | NP3168A | rrnAC3147 | Hmu2604 | hla0163 | HVO_0304 | Hbo1177 |
1791 | VNG2151 | 2376 | 1666 | 1578 | 1639 | 1599 | 1495 | 1633 |
1977 | NP3168A | 1666 | 2392 | 1804 | 1765 | 1659 | 1652 | 1685 |
1892 | rrnAC3147 | 1578 | 1804 | 2338 | 1841 | 1550 | 1614 | 1646 |
1964 | Hmu2604 | 1639 | 1765 | 1841 | 2346 | 1665 | 1627 | 1748 |
1858 | hla0163 | 1599 | 1659 | 1550 | 1665 | 2324 | 1622 | 1756 |
1911 | HVO_0304 | 1495 | 1652 | 1614 | 1627 | 1622 | 2335 | 1799 |
1953 | Hbo1177 | 1633 | 1685 | 1646 | 1748 | 1756 | 1799 | 2358 |
323 symbols consensus -MDVLAVAEHRRGELRDVSLELVTAGRELADATGGDLHLAVISGDVDAFADELNRDGVDT #oth 1121.1131....2..2..3.222..1111233112.13.111.12141133.212...3 VNG2151 ::S:::::D:::::::G::F::L:::::::::MDTE::A::V:::T:G:::::::A:::H NP3168A ::T:::IT:::::::::::::::S:::::::EL::::A::::G::::::::::::::::: rrnAC3147 ::S:::I:::::::::P::::QLA:::D:::KL::E::T:::G:::E::GA::::E:::: Hmu2604 ::T::::::::::::::::H:::::::::::::D::::V::V::S:EEY::R:D:::::V hla0163 MS:::V:S:::::::::::Y:AI:::::I:::R::N::V::::::I:R:::D:::E:::A HVO_0304 MS:::::V:::::S:::::F::::::SD:VGD::::::::I:G:::::::G::SLA:::A Hbo1177 MS:I:::::::::D:::::Y::::::::::E:::::::::I::::::T::SH::L::::: consensus IHTVAEGEEFNHDVYTQAVEALAEELDPTVVLMPNSVNGLDYAPAVANRLDRPLVTDAIG #oth 111.24.2..1.2.1211241.3322.133112111...........323121211.111 VNG2151 V:A:EH:A:::::::V:::A:::GD::AA:::T::::::::::::::T:TG:TY:S:::: NP3168A :Y::D:::::::G:::::I:Q:HD:::::AL::::::::::::::::QS::I:::::V:: rrnAC3147 V:::DI:::::::::::V:TQ:TT::::::L::::::::::::::::::::::::::VVD Hmu2604 :::::H:::::::::::::TQ::::V::::L:::Q::::::::::::::VGL::I:::VD hla0163 V:A::N::::D:T::QS::G::L:KI:AGT:VI::::::::::::::EAH:L:::::V:: HVO_0304 :::::::D::::::TV:::::::::::::Y:::G:T:::::::::::E:::::::::::: Hbo1177 ::::EY::::::::::::AC::T:::::QY::T:::::::::::::::::GL:V:S:::: consensus LEYDDGLTVTREMYGSKVETTIDVDADRAAVTIRPAEWPAAEGDGDAAIEAFDADIDESA #oth 325221121...2.11.1.1.312332331111.11..322.33.113124122131.13 VNG2151 :DHG:T:E:::::::::::::ME:SDGPYV:S::G::::::::V:::E:ST:::::::D: NP3168A ::G:ETVE::::Q::G:::::Y:I:::QY:L:V::::::T::A:::::::::::::::D: rrnAC3147 IDAE::::A:::L::::A::::::H::Q:::::::::::TI:T:::::::::::T::::: Hmu2604 :A::::::A:::L::::::::::SH::ST::::::::::::::N:::TV:P:E:T::::: hla0163 F:::::::A::::::::::::V::AG::FVL:V:GG::AP:::V:::TV:SLEV:HP::- HVO_0304 ::N:G::V::::::A::::S:VE:::::::::V::G::D:T:EP:EP:::::SF:L:::R Hbo1177 MAF:G:::::::::::::::::E::SE::V::::GG::EPT:A::::DVAV::FTP:::E consensus IGSTVTGFEEVGGGDVDIADADVLVSVGRGIEEEENLELVEELADALGATLSSSRPIVDN #oth 3121.2..1...1..1..21.11...1.........131133..1111..1.2...11.. VNG2151 ::A::N:::::::::::::::EF:::::::::::::IA:I:A::ETT::::::::::::: NP3168A L:T::N::::::::::::SE:::::::::::::::::P:::::::::D:::::::::::: rrnAC3147 VR:::K:::::::::I::T::::::::::::::::::DIIHD::E::D::V:G:::LI:: Hmu2604 :R::::::Q:::::::::SE::::::I::::::::::D:IRD:::T:D::::A::::::: hla0163 -:AR::::::::::::::::::::::::::::::::::::::::::::::::A::::::: HVO_0304 VR:R::::::::S:::::::::::::::::::::::I:::Q::::::::::::::::::: Hbo1177 :::R::::::::::::::TE::::::::::::::::I::::R:::::::::::::::::: consensus GWLPKNRQVGQSGKVVTPDVYIAVGISGAVQHVAGMKGSDTIVAINTDPNAPIFDIADYG #oth ...111........1...11.1.1..............111.1.1.1.11...1...... VNG2151 :::A::::::::::Q::::::L::::::::::::::::A:::I:V::::::::::::::: NP3168A ::::A::::::::::::::::::I:::::::::::::::::::::::::::::Y:::::: rrnAC3147 :::A:D:::::::::::::::::I:::::::::::::::::::::::::::::::::::: Hmu2604 :::::::::::::::::::::::I::::::::::::::A:::::::D::::::::::::: hla0163 ::::::::::::::::::::::::::::::::::::::::::::::::S::::::::::: HVO_0304 :::::D::::::::::::KF::::::::::::::::::AEN::::::::D:::::::::: Hbo1177 :::::::::::::::::::::::::::::::::::::::E:::::::::::::::::::: consensus IVGDLFDVVPELIEEFQ------ #oth 111...1...1..11.3111121 VNG2151 ::::::::::A:::::GGEAPSV NP3168A ::D:::E:::::::::GGEAPDV rrnAC3147 :QD:::E:::A:::Q:::::::: Hmu2604 ::D:::::::A:::Q:E:::::: hla0163 ::::::E::::::D::A:::::: HVO_0304 ::::::::::::::Q:E:::::: Hbo1177 V::::::::::::D:::::::::