|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1871 | VNG0546 | HVO_0697 | Hbo0838 | HQ1257A | NP1624A | hla2326 | rrnAC3510 | Hut0447 | Hmu0980 |
1326 | VNG0546 | 1853 | 1077 | 1089 | 1146 | 1150 | 1253 | 1177 | 1151 | 1215 |
1452 | HVO_0697 | 1077 | 1882 | 1374 | 1391 | 1120 | 1310 | 1282 | 1227 | 1284 |
1443 | Hbo0838 | 1089 | 1374 | 1872 | 1406 | 1242 | 1300 | 1278 | 1220 | 1270 |
1449 | HQ1257A | 1146 | 1391 | 1406 | 1879 | 1163 | 1282 | 1237 | 1226 | 1312 |
1401 | NP1624A | 1150 | 1120 | 1242 | 1163 | 1875 | 1230 | 1314 | 1252 | 1331 |
1478 | hla2326 | 1253 | 1310 | 1300 | 1282 | 1230 | 1874 | 1346 | 1260 | 1313 |
1589 | rrnAC3510 | 1177 | 1282 | 1278 | 1237 | 1314 | 1346 | 1889 | 1488 | 1532 |
1513 | Hut0447 | 1151 | 1227 | 1220 | 1226 | 1252 | 1260 | 1488 | 1873 | 1475 |
1594 | Hmu0980 | 1215 | 1284 | 1270 | 1312 | 1331 | 1313 | 1532 | 1475 | 1862 |
256 symbols consensus MDEIEIERVADPDLDDPVLVEGLPGVGHVGKLAAEHLLEELD-SELVRRVYSDHFPPQVT #oth .113221532233.32.1.1.......1....11..121.21122213111133.....1 VNG0546 :::LS::W::E:S::::A::::::::::::::V:::VIA:A::::::C::H:EY:::::: HVO_0697 ::D::::A:EEV::T::::I:::::::N:::::V::::::FEEAT::::::A:A:::::S Hbo0838 :ED::V:TL:::::R::::::::::::::::::V:::::::::::P::YI:A:E:::::: HQ1257A :ED::::T:GEAT:R::::::::::::::::::V:::V::F::::ELT:::A:E:::::: NP1624A :::FD:::P:::E::N:::I::::::::::::::::::::F::A:::::I::E::::::: hla2326 ::D:::DE::T:E::::::I::::::::::::::::::::F::G::::::::TE:::::S rrnAC3510 :::FD::::::::::E:::::::::::::::::::::::::E::::::::::T::::::S Hut0447 :::Y:T:VL::V::EE::::::::::::::::::::::::::::TP::::::Q::::::S Hmu0980 :::F::::I::GE:T:::::::::::::::::::::::::::::V::A::::Q::::::: consensus V-DDGVAELACAEFHAVE-P-DGRDLLVLTGDHQAQDNAGHYGLTDTFLDIAEEFGVERV #oth 23211421.141321.14122323.2.211.....2335.1.31121...2122112334 VNG0546 :G::S:::::A::I:::::T:G::::::V::::::::TV:Q:RV:EA:::A:A::DATD: HVO_0697 I::E:::::THVAI::::T:GE:P:::L::::::::S:E:::H::::::::G:::::::L Hbo0838 LN::S::Q::R::::::D:A:GD:::::::::::::T:S:::H:::A:::::::::::EG HQ1257A :D::::T:::H:S::::S:T:::P:::I::::::::SH::::H::::::::::DM:A:S: NP1624A ::E::RTQ:::::VY:IS:A:AE::C:::::::::A:GP:::R::EA:::V:AA:D:S:I hla2326 IDG::::::T:::::::::T:::A:::::::::::GS:::::K::T::::::::::AT:A rrnAC3510 I::E:Q:Q:::::::::T::EE:Q:::::S::::::N:Q:::::::::::::D:::IQ:: Hut0447 ::E::I-:::S:T::::T::E::Q:M:::S::::::::V:::::VE::::V:AD:D:::I Hmu0980 ::E::TTQ::S::::::R::E::::M::::::::::::E:::::::::::V:::::::S: consensus FALGGVPTGELVEEPDVLGAVTTEDLIEELEDAGVEFRENEPAGGIVGVSGLLLGLGGRR #oth 21.........11222.1..322434424.332112..23.....1..1...11.1131. VNG0546 :S:::::::::::DH::I:::SSAA:KDG:A:::::::SE::::::::S::::V::::K: HVO_0697 ::::::::::::D::S:::::AD:SRLD::DE::I::::G:::::V:::::::::::::: Hbo0838 Y:::::::::::D::S::::::D::DV:R::AVD:::::D:::::::::::::::::E:: HQ1257A Y::::::::::::::::::::A:NGG:DP:S::::::::G:::::::::::::::::::: NP1624A :::::::::::::T:::I::A::D:::::::AVD:::::::::::::::::::::::E:: hla2326 ::::::::::::::YT:::::SDG::::G:::V:::::PD::::::::::::V::::::: rrnAC3510 :::::::::::I::Y:::::T::::FK:T::ES::A:::D::::::::::::::::SK:: Hut0447 V::::::::::I::Y::I::::::::ET:::::::D:::::::::::::::::::M:Q:: Hmu0980 Y::::::::::I::Y:::::S::DS:V::::SV::A::::::::::::::::::::S::: consensus GLDAACLMGETSGYLVDPKSAQAVLEVLQDLLGFEVDYESLEERAEEMEEVVRKIQEME- #oth 24312.............21.21.112.334231221231.11..11.1..1521.2.13 VNG0546 :F:::::::::::::::::A:K:::A::GAR:D::M:E:A:DD:::::::::SRL:D::: HVO_0697 ::::T:::::::::::::Q:::V:I:::::::Q:S::F::::::::::K::AA:::::QQ Hbo0838 ::SV::::::::::::::Q:::V:::::::VID:::GF::::::::::K:::G:::::QS HQ1257A ::S:::::::::::::::T:::::::::ETVV::::G:::::::::::K:::E:::Q:QG NP1624A :YE::::::::::::::::::RV:::A:EETVPLDIG:D::::::D::::::KQ::Q::Q hla2326 :F:::::::::::::::::::R::::::A:H:D:SI::::::D:::::::::G:::::Q: rrnAC3510 DVP:S:::::::::::::::::::::I:::VI::::::S:::D::D:::::::::::::Q Hut0447 EWP:::::::::::::::::::::::I:::::::::::A::::::DD::::::::::::: Hmu0980 D:::::::::::::::::::::::::I::E:::::I:::A::D::D:::::A:::::::: consensus QQQPS-PSDEDLRYIG #oth 2542314511...... VNG0546 -ET::::G:::::::: HVO_0697 :::G:IA::D:::::: Hbo0838 :::GM:-N:D:::::: HQ1257A :::GM::T:D:::::: NP1624A NATAA:::E::::::: hla2326 -DG:A:VP:D:::::: rrnAC3510 :NS::::A:::::::: Hut0447 :GA:::SP:::::::: Hmu0980 :GT:T:::::::::::