|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2428 | HQ3035A | HQ1831A | rrnAC3003 | NP1118A | HVO_B0059 | Hbo1624 | VNG1554 | Hmu1994 | hla2067 |
775 | HQ3035A | 2333 | 549 | 729 | 716 | 687 | 707 | 689 | 704 | 745 |
1772 | HQ1831A | 549 | 2446 | 1578 | 1555 | 1753 | 1730 | 1648 | 1642 | 1682 |
1981 | rrnAC3003 | 729 | 1578 | 2451 | 1742 | 1856 | 1862 | 1943 | 1862 | 1866 |
2017 | NP1118A | 716 | 1555 | 1742 | 2409 | 1925 | 1909 | 1876 | 1913 | 1859 |
2191 | HVO_B0059 | 687 | 1753 | 1856 | 1925 | 2474 | 2308 | 1930 | 1949 | 1913 |
2157 | Hbo1624 | 707 | 1730 | 1862 | 1909 | 2308 | 2425 | 1897 | 1928 | 1934 |
2107 | VNG1554 | 689 | 1648 | 1943 | 1876 | 1930 | 1897 | 2429 | 1938 | 1974 |
2076 | Hmu1994 | 704 | 1642 | 1862 | 1913 | 1949 | 1928 | 1938 | 2456 | 2020 |
2078 | hla2067 | 745 | 1682 | 1866 | 1859 | 1913 | 1934 | 1974 | 2020 | 2508 |
346 symbols consensus MS-----------DNDSTNDSSGGH-CSTPDSDGEVAEEIAIVSFERKLDTAEEIRAELA #oth 112321111111124534322321211311111.11143.11111.11421.43143313 HQ3035A --:::::::::::--MN::T::VST:ATAASDG:RSINS:G:::::::W:::TT:::T:T HQ1831A ::::::::::::::TEN::EETS::::::::::::::T:::VIAP:HAD:::DN:QTT:: rrnAC3003 --:::::::::::MSTD:D:D::S:G:KA:::::::::N::::A::::M::::D:VDGIG NP1118A --:::::::::::-MSD::::D::S:::::::::::::::G:::::::RPV::::::::S HVO_B0059 ::DT::::::::::TN:DT::GS::::Q:::::::::D:::::::::::::::::KRD:: Hbo1624 --:::::::::::--M:DS::GS::::::::::::::R:::::::::::E:::::KRD:: VNG1554 ::T:::::::::::::TET:D:::::::::::::::::D::::A::::R:::A::V:GIG Hmu1994 ::TETD::::::::::TG:EE:S:::::::::::::::::::I:::::::::R::E::IG hla2067 ::TDDDTTTDASS:ST:S::D:::::::::::::::::::::I:::::WE:::DVE:::: consensus DDYDRIDILEYHGDVFAEHWGEYDCFVGLMASGIAMRKTAGLLDDKWED-PAVVVVDEEL #oth 231221.222.2211.132..2...121111.1111111.3..1.112111111.2.12. HQ3035A EEFSTV:LI::D::::ER:::::::LL:::::::V:::S:N::A:ASAPSQPI::T:::: HQ1831A SA:::::LI:::T:A::D:::V::::I:VLP:DTVTQQ::P::::::D:::::::I:SN: rrnAC3003 :R:ES:::::::::::E:Y:::::::I:::::::::::::H::::::D::::IC:::::: NP1118A :::E:::::D:::E:::DN::D:::::::::::::::::::::::::::::::::I:::: HVO_B0059 :::::::V:T:::::::D:::::::::::::::::::::::::::::::::::::::::: Hbo1624 :::::::::T:::::::::::::::::::::::::::::::::::::::::::::::::: VNG1554 :R::S::::D::::::::::::::::::::::::::::::::::::::::::::::::A: Hmu1994 :::ESV::V:::::::E:Y:::::::::::::::::::::P::::::D::::I::I::A: hla2067 :R:SS::LI::ES:::EQ::::::::LA::::::V:::::::::::::::::::::::A: consensus TWAIPITGGHHGANQVADDLAKLGAVPAMTTASEAAGKQGVESKAKALDSHVVNGDSTVA #oth .....11..11......41.341.....1.11.1112111114211..22..2112111. HQ3035A ::::::L::ED::::::TA:EQM:::::V:SG:VTNRN---DAQST::K:::DSETEMT: HQ1831A ::::::::::::::::::::TA::::::::::::::::::::TR::::N:::I::K:::: rrnAC3003 :::::::::::::::::::::SM:::::::::::::D:::::KQ:::::A:::::::::: NP1118A :::::L:::::::::::H::S::::::::::::::::::::::::::::::::::::::: HVO_B0059 :::::L:::::::::::H::S::::::::::::::::::::::::::::::::::::::: Hbo1624 :::::L:::::::::::Y::S::::::::::::::::::::::::::::T:::::::::: VNG1554 :::::L:::::::::::::::SM:::::::::::::::::::ER:::::T:::::::::: Hmu1994 :::::::::::::::::N:::R:::::::::::::::::::::::::::T:::::::::: hla2067 :::::::::::::::::::::SM::::::::::::::::::::::::::::::::::::: consensus TNLAVLNDELGPVARLDGPKAVLVGDDVTVLKRNGDDGVVLGTGSVSGADKEQFLDAWEA #oth .1.111214131121211.41.2111211.121.431111..21212113431242..33 HQ3035A :Q:DIRA:ASSII:P-E::AV:::D:ETA:TTT:TTTAI-::VAAADT:TP:IIDT::TT HQ1831A ::::::DET:D::S:I:D:T::IADQS::::N:::N::I:::::::::::TS:::T:::R rrnAC3003 ::::::D:::::IE::::::::::D:::::::::K:::I:::C:::A:::V:::HA:::Q NP1118A :::::::::::::E:::::R::::::::::::::S:::::::::T:D:VR:::V:::::: HVO_B0059 :::::::::::::::::::::::::::::::::::G:::::::::::::K:A:::T:::Q Hbo1624 ::::::::::::::::::::::::D::::::::::::::::::::::::K:::::T:::R VNG1554 ::::::DEN::::::::::Q::V:::::::::::S:::::::::::::::EQ::R:::A: Hmu1994 :::::::E::A:::::::::::::::::::::::E:::::::::T:::V:TQ:V::::D: hla2067 ::::::D:G:::::::::::::::::::::::::::::::::::T:::V:T::VV:::DR consensus ALDDAD-CDIDDVDFVATGTRKADEDGLLAAAEEIGLGVVAFEKETLEEFEGPTPSRSKE #oth 2.435214131..211..211123131123..324221.241211214521112111211 HQ3035A I:A:H:TVT::::AVI::---LDPT:A:TT::K:M::A:ACVDADPPAVDADAVTDAEVA HQ1831A ::STVE::TW:::::I::::::ET:P::::::NDVNV::IS:C::::F:::::::::::: rrnAC3003 :::E:::L:R:::E:::::::::::E:M::::::W::::I::::::::G::::::::::: NP1118A ::GETE:H::S::E::::A:::EG:A::YE::::::V:::C:D::::LDH:::S:::A:: HVO_B0059 :::::::::W:::::::::::::::P:M:D::::::A:::Y::::::T:::::::::::: Hbo1624 :::::::::W:::::::::::::::P:M:D::Q::DA:::Y::::::T:::::::::::: VNG1554 S:AAT::Y:::::E:::::::::::E:::::::AL:::::::::::::AH:::::::::: Hmu1994 ::::L::L:RS:::::::::::EG::::YE::Q:::A:::L:::::::T::::S:::::: hla2067 ::TAEG:L:F:::::::::::::G::::YE::Q:LD::::L::::D:::::::::::::: consensus LIGWPGIAEASAIAGGRDHELLAEKERY--DEAVTVAVGR------ #oth 11111111.11111112322143.142211.2.....213111111 HQ3035A VTQLDTSI:SITTTAMTTTTATS:TQTMNG:T:::::LAIISEDAQ HQ1831A :::::::::::::::::N::::V::LK::::::::::::Q:::::: rrnAC3003 ::::::::::::::A:SE:D:::::T:::::::::::I:::::::: NP1118A ::::::::::::::::::::::R::::F:::::::::I:K:::::: HVO_B0059 :::::::::::::::::::::VV::R:::::D:::::::::::::: Hbo1624 :::::::::::::::::::::IV::Q:::::D:::::::::::::: VNG1554 ::::::::::::::::::N::::::::::::::::::::K:::::: Hmu1994 :::::::::::::::::E:D:AR::::F:::D:::::::::::::: hla2067 ::::::::::::::::::::::::::::::::::::::::::::::