| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 3492 | hla0566 | HVO_0038 | Hbo1456 | HQ3721A | VNG0422 | rrnAC0073 | Hmu1259 |
| 2674 | hla0566 | 3660 | 2367 | 2309 | 2400 | 1727 | 2001 | 1981 |
| 2833 | HVO_0038 | 2367 | 3578 | 2617 | 2568 | 1766 | 2109 | 2075 |
| 2776 | Hbo1456 | 2309 | 2617 | 3428 | 2743 | 1821 | 1963 | 1931 |
| 2822 | HQ3721A | 2400 | 2568 | 2743 | 3562 | 1809 | 2081 | 2041 |
| 2189 | VNG0422 | 1727 | 1766 | 1821 | 1809 | 3153 | 2107 | 2161 |
| 2480 | rrnAC0073 | 2001 | 2109 | 1963 | 2081 | 2107 | 3482 | 2642 |
| 2467 | Hmu1259 | 1981 | 2075 | 1931 | 2041 | 2161 | 2642 | 3505 |
472 symbols consensus MSATPPGPKGEPLFGNSRQYARDPFTFLRAVADAYGDVVRFDLGPLDTYMLTNPADVERV #oth 1242111131412113213115111314433332112123131..21.22222.321122 hla0566 ::::::::I:D:V:::G::::D:::S:M::C::S:::::::::::RE::::::::::::: HVO_0038 ::::::::::L::::A::::::::::::T::::::::::H::::::::::::::::::T: Hbo1456 ----------V:::::::E::K:::::::Q:SE::::::Y:G::::::::::::::I::: HQ3721A ::TQ::::N:V:V::::::::S:::::::S:::::::::::S::::::::::::V:I::: VNG0422 ------------------------------------------M::ME::VV:E::L:::L rrnAC0073 ::K::::::::::::S::T::::::R:IS:LER:::::A:::M::M::V::CD:TAI::: Hmu1259 :AE::::::::::::S::T::Q:::R:VE:LE::::G:A:::M::M::LLIAE:EL:QQI consensus LVSDAAKFRKPDFQDDAIGDLLGDGLLLSEGETWRRQRQLANPAFSMARIAALAGTMTDH #oth ..3114212..2.121.111...1...1...21.33..41.2.1.332.23422331231 hla0566 ::A::ERY:::::G::::DT:::N:::M::::::E:::R::S:S:HSR::G::::::VE: HVO_0038 :::E:S:::::Q:::R:::::::::::M:::A::K::::::Q:::DVR::STM::M:::R Hbo1456 :::ED:::H::::::::::T:::::::::::::::K::E::Q:S:DPR:::::GE::::: HQ3721A ::T:DQ:YQ::::::::::T::::::::::::::QK:::::Q:::GPK::TS:::::::: VNG0422 ::::::E::::E::A:::D:::::::::::::S::E::GR:::::::::V:GFDADIAA: rrnAC0073 :::E:DR:::::::G::L::::::::::::::::EQ::K::::::::::LSGM:DRI:G: Hmu1259 ::D:D::Y:::::::::L:::::::::::::D::QE::K::::::::::L:DMDDRIV:: consensus AESMLADWADGDVVDVQLEMARVTVDIIVDAMFGVSLPDERVRTVQENLEPLGARFEPDP #oth 1333232.63.223.12331112.131.122.2.32141322421213.2.1.2...... hla0566 T::Q:::::::E:::::::V::L::K:::S::::ADIT::E:K::::K:::::::::::: HVO_0038 T::::SS:G:::::::::::::L::E::::::::TD:D:::I:R:::::::::::::::: Hbo1456 :TA:VEG:N::E:R:::::::::::K::::::::S::A:::::::::::::::K:::::: HQ3721A TRG::DG:EP::IK::H::::::::R:::E::::T::T:TQTTA:::::::::K:::::: VNG0422 :ADRVD::PV::T:::EAA:THI:L:V:L:V:L:::::EA::DAIGDA:::V:::::::: rrnAC0073 ::DRI:::SH:::I:AEQS:T:::L:V:L:L:M::E:SEQ::Q:IE:Q:L:::Q:::::: Hmu1259 :::LV:::Q::S:::AERG:TH::L:V:L:L:M::E::::::T:::DQ:V:::::::::: consensus LRFAIPDWAPTRENREYDAAVSTLEDVIDDIVEERRGTEY-------------------- #oth 3..23.3.3.12112.1431343.1322121233.2113433342333122221111111 hla0566 R::L::N:M:::::::F:::IG:::S:::G::DR::::::DPSVDPAGPGGVAVRGPVGD HVO_0038 :::LT::::::::::::KQ:L:E::SLVW:::::::::::GETPASSVPADAT::::::: Hbo1456 :::L:::::::::::::KQSI:I::GI:::V:A::L:::NDPSAAVA::::::::::::: HQ3721A :::I::::V::Q::Q::HKS::V:::I::E::S::::::TNSDIDPGA:::::::::::: VNG0422 V:::V:E:L:MPDD:::A:::A::D:LV::::AA:E::AS:::::::::::::::::::: rrnAC0073 I:::M:Q:M:MPDDA:FNR::R::DE:L:::I:V:EDSL-:::::::::::::::::::: Hmu1259 I:::M:::V:MPDDA:F:::ME::DG:L:::F:R::::T-:::::::::::::::::::: consensus GEDGDG----PMDLLSVLLRARDRGEQTDEQLRDEMMTMLLAGHDTTALTLTYTWYLLSE #oth .513221111...1..1.1..212.1.13321...21.2..........1...111...2 hla0566 :P::::AGDL::::::::::::::::::::N::::LV::::::::::::A::::F::::N HVO_0038 ::ER--::::::::::I::::Y:E::::E:N::::L:::::::::::::::::A:::::Q Hbo1456 ::::A-:::::::::::::::KQ::::::Q:I:::::::::::::::::::::AF::::Q HQ3721A :S:D:-::::::::::I::::KQ::::::K::::::::I::::::::::::::::::::: VNG0422 :G:::D:::::::::::::::::::::SLDR::::V::T::::::::::::::::F:::: rrnAC0073 :T:E:::::::::F:::::::::D:N:SP::::::::::::::::::::::::::F:::: Hmu1259 :DED:::::::::F::I:M::::::::S:::::::::::::::::::::::::::F:::: consensus HPEVEARVHEELDAVCGDE-TPTMADVRELDYLERVLQESMRLYPPVYTIFREPQVDVRL #oth ..22132122.3151421313.1422313221111.12.11.1.....23..1.331.3. hla0566 :::ARE::AR:AA:ATA:G:P::A::A::MKFT::::N::L::::::::L::::KL::K: HVO_0038 :::A::KL:R:::E:L:GR::::FE:::Q:E:T::::N:A::::::::VM::::K::::: Hbo1456 :::S::K:QA:V:K:::G:::::V::::QF:::::::::A::::::::V::::::::::: HQ3721A ::K:RDQ:::::AS:::G::::::::T:S:::T:::::::::M:::::V::::::::::: VNG0422 ::D::::L:A:::GALD:GAQ::V:QLQD:::::W:::::::::::::NV::T:IEP:E: rrnAC0073 :::::Q:::::::D:I::D:R:G:EH::::::::W:I::A::::::::::::::TE::T: Hmu1259 :::::Q:L:::I:::V::::R::IDH:Q::EF:DW:ID::::M:::::::::T:TDP:E: consensus GGYRVPAGSAIMLPQWAVHRSPRWYDDPEEFDPDRWRPERRADRPRFAYFPFGGGPRHCI #oth 2.121231231.11..21.1.112112.22...2..4...333.1..11........... hla0566 ::::I:E:::L::S:::I:::::::::::T:::S::E:::QSK:::::F::::::::::: HVO_0038 ::::::::::::::::V::::E::W:::L:::::::A:::AG:::::::::::::::::: Hbo1456 ::::I:S:::::::::V:::::::::A:T:::::::::::::S::::S:::::::::::: HQ3721A ::::I:::::::::::V:::::::::N:TT:::::::::::::::::S:::::::::::: VNG0422 A:SE::::AP:::::::I::::DHW::::A:::E:::::::::::::::::::::::::: rrnAC0073 S::E:E::TTL:V:::G::::E:F:::::T:::E::K:::ASE::::::::::::::::: Hmu1259 :::D:APSTNL::::::::H:E:HWEN::::::E::S:::SE::H:::F::::::::::: consensus GKHLSLLEAKLILATVAQRYRLDYEGDTPLSLRGSLTMHPEQPMGMRVRER- #oth ..21111.12..2111124.2.212123112121...3..22213..232.1 hla0566 ::AF::::::::::E:CS::D:::::PD-:::::::::::DH:VP::I:::: HVO_0038 ::::::::GR:::G::::::E:::VR:E:F:::::::::::E:::::L:A:D Hbo1456 ::QF:MM:::::::::::A:E:::VR:R:F:::::::::::E:::::L:A:: HQ3721A :::::M:::::::G::::S:E:::VR:R:FD:::::::::DE::::::T::: VNG0422 ::Q:A:::::::V::::SD:::R::::::::FVP:::I::::E:R:::EP:: rrnAC0073 ::::AM:::Q::T::T:SQ:::EFQ:E:::E:LP:::A::R:K:S:::Q::: Hmu1259 ::::A:::::::V::::KD:::RF::E:::E:VP:::V::R:E:S:::E:::