|
Pairwise sequence scores | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2201 | rrnAC3033 | VNG0851 | hla2022 | HQ2591A | HVO_1626 | Hbo3218 | NP3152A | Hut0196 | rrnAC0400 | Hmu1365 |
1330 | rrnAC3033 | 2288 | 1147 | 1129 | 1144 | 1181 | 1168 | 1063 | 1209 | 1187 | 1195 |
1697 | VNG0851 | 1147 | 2531 | 1434 | 1417 | 1540 | 1473 | 1453 | 1472 | 1412 | 1448 |
1712 | hla2022 | 1129 | 1434 | 2244 | 1496 | 1586 | 1585 | 1423 | 1464 | 1410 | 1462 |
1674 | HQ2591A | 1144 | 1417 | 1496 | 2279 | 1571 | 1719 | 1447 | 1421 | 1452 | 1410 |
1775 | HVO_1626 | 1181 | 1540 | 1586 | 1571 | 2198 | 1742 | 1429 | 1518 | 1568 | 1538 |
1763 | Hbo3218 | 1168 | 1473 | 1585 | 1719 | 1742 | 2208 | 1460 | 1499 | 1531 | 1489 |
1662 | NP3152A | 1063 | 1453 | 1423 | 1447 | 1429 | 1460 | 2188 | 1467 | 1496 | 1524 |
1747 | Hut0196 | 1209 | 1472 | 1464 | 1421 | 1518 | 1499 | 1467 | 2175 | 1535 | 1603 |
1761 | rrnAC0400 | 1187 | 1412 | 1410 | 1452 | 1568 | 1531 | 1496 | 1535 | 2216 | 1790 |
1730 | Hmu1365 | 1195 | 1448 | 1462 | 1410 | 1538 | 1489 | 1524 | 1603 | 1790 | 2211 |
332 symbols consensus -----------------------------------------MVDSDWGDWLPRA-VEAAD #oth 1111111111111111111111111111111212333333413611.22.1121111213 rrnAC3033 :::::::::::::::::::::::::::::::::::::::::::Q:T:D::FV:DEI::T: VNG0851 MRGDDIDSSAMTLITSYTCPRAVKCPGRTTERLGRGPPTAG::H::::::::A:::A::: hla2022 ::::::::::::::::::::::::::::::::::MHSQESD:T::::S::::::::AD:: HQ2591A :::::::::::::::::::::::::::::::MLDVYIDNMSTIKT:::S::::D:::::S HVO_1626 ::::::::::::::::::::::::::::::::::::::::::TV:::S:::::::::S:: Hbo3218 ::::::::::::::::::::::::::::::::::::::::::SV:::::::::::::D:S NP3152A ::::::::::::::::::::::::::::::::::::::::MTIH::::::::T::IA::E Hut0196 :::::::::::::::::::::::::::::::::::::::::::S::::E:::A::I:STT rrnAC0400 ::::::::::::::::::::::::::::::::::::::::MT:E:::D:::::::::S:T Hmu1365 ::::::::::::::::::::::::::::::::::::::::MT:::::::::V:::::D:: consensus P-DGVAIWYLGCNGFVLKGSDGTTLFIDPYLGTGDPPRTVRMIPVPFDPRDVTEADAVLA #oth .121222.......1321323111231...2.2....111..1...12.6.2542..1.2 rrnAC3033 :G:::V:::::::::::R-:QS:::Y::::F::::::NLI::::::M::A:A:QC::T:V VNG0851 ::::I:V:::::::VI::A:::::::V:::::::::::::::::::::::::SD:::::: hla2022 :::T::L::::::::AI:::E::V:W::::V::::::::::::::::::D:ID::::::: HQ2591A ::NT:::::::::::F:::NE:::IA::::V::::::::::::::::::G:I:TM::::: HVO_1626 ::ET::::::::::::I:::E:::::V:::V:I::::::::::::::::E:::::::::: Hbo3218 :::T:S:::::::::F:::::::::A::::V:L::::::::::::::::H::A:M::::: NP3152A ::::L:V::::::::A::AA::::V::::::::::::::::::::::E:T::V::::::: Hut0196 :::::::::::::::::::AG:::I:::::::::::::::::::::::::::RA:::::: rrnAC0400 ::::L::::::::::IV:S:G:::V:::::::::::::::::V::::N:E:I::C::::G Hmu1365 ::::L:::::::::::::S:G:SVVYV:::::I::::::::::::::::D::R::::::: consensus THEHTDHVHGPSQAPILAGTGADFYAPDASLAVARDDEAWTDEYDVDDDQLREVTEGDTL #oth ..1.2..2.12.11.11241115222133143243351415233525332483133.124 rrnAC3033 ::::I::M:P::YG:LVEDL:::L:::S::Y----:SPDYDG:MR:P:E:RN:IAV::EF VNG0851 :::::::::::::::L::D::CSL:::E::I:::::::R:Q:D:A:TT::Y:R:AV:::Y hla2022 ::::::::::::::::::N:D:::V:::D::::::EE:R::E:WE::EEAFL::::::E: HQ2591A :::::::T:::::G:::ES:D:R:::::D:ID:::ET:::Q::::INET::QVIS::::I HVO_1626 ::::::::::Q::::::EN:::T:V:::D::S::Y:::::F:D::LSE::FE::A:::SV Hbo3218 :::::::::::::::::ES:::QY::::D::D::LE::::V:D::ISEE:FT:::D:::F NP3152A ::D::::T:::::::::T::D:T::G:PT:V:T:---::::::HG::GNDIA:I:::E:: Hut0196 ::D:V:::::R:::::::E:::E:F::::::::T-:A:G::::W::A::::SS:SI::EI rrnAC0400 :::::::::::::::::::::::Y:TT:SGHD:I:E-:::LEN:S:T::::H:::::::: Hmu1365 :::::::T::::::::::::::T::GT:::HD:V-SA:N::ETW::::E::::IG::::F consensus EIGEFTVHVEPANDPDATHPVSYVIEHDAGTFFHGGDARPAE-FEAVGERYDIDLGVLAF #oth 31.2111..3523.1.1521.2..21.12..21.1..21.42414421452.1.2.21.. rrnAC3033 AV:D:::::TGT:::::IE::G::::::::::::A::S::::A:SD:::QF:::V:A::: VNG0851 D::S:::::T::H::::VQ:::::F::::::V:::::TK::DALAEI:AAH:::V:I::: hla2022 K::::::::VETE:A::::::G::::::S::L::A::SK:SAS:P:LADEF:::::I::: HQ2591A D:::::::::Y:H:::S:::::::::::T::::::::TK:H:D:D:L:NA:::::::::: HVO_1626 D:::::::::::Y::::S:::A::F::ES:::I::::TK:::E:AGI:::::L:::I::: Hbo3218 :V::::I:::HSY::::::::::::::ES::::::::TK:D:E:::L::K:::::::::: NP3152A :V:SLRI:::::H::::D:::G::V::ES:::::::::::S:D:::I:GS::::::AV:: Hut0196 :V::::I::AD::::::EE::::::Q:E::::::::::::GA:::S::G:F::::::::: rrnAC0400 :::DL::::::::::::E:S::::F:::::::::::::::G::::S::::::::A::::: Hmu1365 :V:DL::::::::::::D::::::F:::::::::::::::GA:::S:::S::::V::::: consensus GSVGMIPDKETGEPVRTKWYNDENEIIEAANDLQLDRLLPTHWDMWKGLTADPTALHAHA #oth .13.412123231143.3..32.122231.33.322212.1.1...1.2121.11.24.2 rrnAC3033 :T::S:YEP:PDSG::::::M::::::::::Q:::S::::S:H:::Q:EAG::KV::E:: VNG0851 ::T:E::::Q:R::SV:T:::T:T:VVAC::A::::::V::::::::::::::::::::T hla2022 ::::RV:::::::::E::::S:::::AA::E::A::::I::::::::::::::::::E:V HQ2591A ::I:N:D::D::::::::::AT:::::R::AA:NI:::::S::::::::::::::::::: HVO_1626 :T::N::::::::::::T::::::Q:::::S::D::::V:::::::::M::::KV::H:: Hbo3218 ::I:N:D:::::::::::::ST:::AVK::S:::F::F::S:::::::::::::V::H:: NP3152A ::A::::::::R::KY:Q::SN::MAA:::AQ::::::::::::::::::::::::RD:T Hut0196 :::::V::AIGE:::::R::::::M:V::::E::::A:::S:::::::M:::::::YD:V rrnAC0400 :T::::D:::::::T::Q::::::M::::::E::::T:I:::::::::M:TE::V::N:: Hmu1365 :T:::::::::R::E:::::::::M:V::::E:::ET:V:::::::::M:TE::V::N:V consensus RSFAHPRRLEIVEIGDRIDL------------ #oth 4.354.6522331..11333311111111111 rrnAC3033 V::DY::VI:PLY::CSVR:SEPGIRRLDALD VNG0851 ::M:S:Q::DV::::::::VS::::::::::: hla2022 ::RS::NQ:::::::::::::::::::::::: HQ2591A Q:YTF::VI::A:::::::I:::::::::::: HVO_1626 K::EA::S:DL::::::V:::::::::::::: Hbo3218 K:::Y:E::::I:::::VE::::::::::::: NP3152A :::D:::T:::L:::::TSV:::::::::::: Hut0196 :::PY:K::D:::::::::M:::::::::::: rrnAC0400 N::E::STFS:I:::::Y::D::::::::::: Hmu1365 N::PA:AI:D::::::::::E:::::::::::