|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 1908 | HQ2298A | NP1088A | HVO_B0048 | Hbo1613 | hla2079 | VNG1568 | rrnAC3021 | Hmu2008 |
1373 | HQ2298A | 1955 | 1172 | 1158 | 1223 | 1161 | 1218 | 1274 | 1257 |
1321 | NP1088A | 1172 | 1832 | 1170 | 1174 | 1125 | 1196 | 1178 | 1225 |
1573 | HVO_B0048 | 1158 | 1170 | 2045 | 1683 | 1275 | 1319 | 1348 | 1340 |
1590 | Hbo1613 | 1223 | 1174 | 1683 | 1979 | 1277 | 1310 | 1361 | 1342 |
1455 | hla2079 | 1161 | 1125 | 1275 | 1277 | 1952 | 1344 | 1359 | 1398 |
1486 | VNG1568 | 1218 | 1196 | 1319 | 1310 | 1344 | 1866 | 1370 | 1337 |
1579 | rrnAC3021 | 1274 | 1178 | 1348 | 1361 | 1359 | 1370 | 1931 | 1427 |
1565 | Hmu2008 | 1257 | 1225 | 1340 | 1342 | 1398 | 1337 | 1427 | 1918 |
277 symbols consensus ----ESDDYDLDSGPD-PAAFAAATPEPEAAE---------NPVYAVGIGPGNLEYLTPR #oth 11232312121221..1..33.134..3544422212222352.21..1...2321..2. HQ2298A ::MS:T:E:N:E:::::::TV:TDH:::RE:A::::::::::::H:::::::STA::::: NP1088A ::::MT:PVEF---::E:::A::S:::S::G::::::::::-::::::::::TT::::R: HVO_B0048 MSED:::P::::::::::::::::A:::SID:TDGGGEDADA::::::V::::::::::: Hbo1613 ::MS:D:P:::::::::::T::::E:::PIE::::::::AN::::G:::::::::::::: hla2079 ::::V:::::::A::::::D::::R::VVD:SGTSGAGGTS:V:R::::::::V:F:::: VNG1568 ::::M:EE:::::::::::S:::Q::::A:GD:::::::::HA:H::::::::PAF::A: rrnAC3021 ::MT:N:::::::::::::DI::SA::DPD:D:::::::::R::H:::::::::DF:::: Hmu2008 ::::M:::::::A::::::::::::::V:SPV:::::::::D:::::::::::PD::::: consensus GERAIREADVVVGFETVVEFVADET--DADLLTCGYRDEADALAAFAERVADGERGTAVL #oth .421.21.1.11..1...1.131531122121....2..532.44.22.113.22...11 HQ2298A :K:S:T::::I:::::::::IR:HIGDETTVF::::::::T::EN::D:::T:AS::::: NP1088A :A::::::::::::::::D::SE:L::TG:A:::::D::PAV::Q:S::I:::D:::::: HVO_B0048 :RQ:::::::::::::::D:::::::::::::::::A:::::::E:GR:::A:D:::::: Hbo1613 :L:::Q::::::::Q:::D:::::::::::::::::A::::::NE::::::::::::::: hla2079 :::::::::::I:::::::::SESV:::G:A:::::A::EE::S:::D::DA::T::::: VNG1568 ::::::D:E:I::::::::::::L:::::::::::::::QA::S::G::::::A:::::: rrnAC3021 ::E::::::::::::::::::::R:::::::::::::::L:T:D:::::::G:::::::A Hmu2008 :::::::::::::::::::::GEVI::EG:A::::::::SET:DR:::::::::S:::L: consensus MGDPNHSGYQFVGKVQRAVDRPVRVIPGISSLQIAASRARTPMEDTTFVTLHKSGDLDAD #oth ...........1...122.23..321....1..1..........212.....1..32332 HQ2298A :::::::::::::::::V::::::I:::::A:::::::::::::A::::::::::EI:DA NP1088A :::::::::::::::EA:::S::E:::::::::V::::::::::E::::::::::PIE:: HVO_B0048 :::::::::::L:::::T:E::::::::::::::::::::::::::R::::::::S:::: Hbo1613 :::::::::::L::::QV:E:::KA:::::::::::::::::::::R::::::::S:::: hla2079 ::::::::::::::::::::A::::V:::::::V::::::::::ASE:::::R::::EP: VNG1568 :::::::::::L:::E:::GE::::V:::::::V::::::::::::::::::::::VSDG rrnAC3021 ::::::::::::::::::::::::IV:::::::::::::::::::::::::::::::SS: Hmu2008 :::::::::::::::::::::::T:V:::::::V::::::::::A:::::::::::VTP: consensus LDRLRRDVGDRHLLVLPRPFDWMPGDIAADLLDAG-ADPSLEALVLERLTHDDEARTRTT #oth 12.13431.3.1..1....1.1..121.35.221212333121..2.1...22.32.311 HQ2298A :A:I:::::T:N::I:::::::::ES:::M:CE::::N:E::T::F:::::EN:S::QS: NP1088A :R::E::::::N::::::::::::ER::HR:RA:::-A:DC::::F:::::E:::V:K:S HVO_B0048 ::::AEAA:E::::::::::::::::::EF:::SD:::A::D::::::::::::RI:::: Hbo1613 ::::TEV::E::::::::::::::::::KL::ES::::R:::::::::::::::QI:::: hla2079 :A:::DG::::::::::::Y:L::::V::::::::::TGG:::::::::::A:::V:::: VNG1568 VA:::DA::::::::::::::L::::::::::E:AD:A:D:D::::::::::::SI:::: rrnAC3021 :::::N:::::::::::::::L::E::::E::::::S::E:P:::Y:::::::::::A:: Hmu2008 :::::A:A:R:::::::::Y:::::::::E:::::::::::::::F:H::::E::::A:: consensus LGELAADAGGSGP--EDTPFSDLSVLAVRAE------ #oth .24.1522235521123131.....111.35422211 HQ2298A ::A::::TAVAE:TR:::D::::::::I:QNTT:::: NP1088A :SS::::IETR--::AE:A::::::::::R-:::::: HVO_B0048 ::G:RDS::::::::DS::Y::::::::::PVDAAD: Hbo1613 ::::RES:::::::::S::Y::::::::::PVTLEDD hla2079 :ED::MH:::DA:::::S::::::::V:::DG::::: VNG1568 ::::::H::----:::E::::::::::::RSA::::: rrnAC3021 ::D::Q::::NSK::D::R::::::FV::R::::::: Hmu2008 :::::NH::::D:::DA::::::::::::T:::::::